Click here to switch to the map view.

The map label for this gene is 66047216

Identifier: 66047216

GI number: 66047216

Start: 4747685

End: 4748905

Strand: Direct

Name: 66047216

Synonym: Psyr_3989

Alternate gene names: NA

Gene position: 4747685-4748905 (Clockwise)

Preceding gene: 66047209

Following gene: 66047217

Centisome position: 77.91

GC content: 51.27

Gene sequence:

>1221_bases
ATGTTGAGTCAAGCAGCACTGATGGAAAACGACACGCTCGCGCGGGTCACCTTAAAACCCGTAGAGTATTTGAACCTTAT
ACTTGATGATGAAAAAAAGGGTGGCCGTGGCGCCGCGCTTATTTTGACCAAAGAAGACATTCTTAGTCTGAAACGTTACG
AACGACACGCCCTTAACATCCCCACGTCACTCGCTCGCGTCGAACAGCAATTGGGTTTTACAACCATTAGCATTCCCGGG
CTTGAGCCTAAAGACATGCTGGTGACTTACAAGGCAATCCACAACCACGGCAAAAGCTGGCTGGGTATCGAGGACGCCAT
CAAGCGCAGCGGTTTCACCATTGACCTGTTTGCCGCACACTTCTCGGATCAGGGTCGGCAGATCATCAGTTACATTGAAA
AAATGGACTTTGCCAGGCAGCTGGGTCTGACCGTTGTCGATCTGACCCTTGAAGAGGTCCGCGATACATCGCCCACGCCA
CTGGGGCAAACCGACCAGAAGGTCTGTATCACGCTGGCCCAGTTCCTGAAAGAAACCGCGTCACAAATAAAGAACCATCA
GCACGCGGCCAGCACGTTGGCGCAACACATCGATACCTTCAGCACCGTCCTGAGCGTTCAACTCATTCCCGGCATCAACG
ATAAGGTAAAACTGGCAAAGCGCTCTGATCTCGACCAGCAGATCAGCGAACTGGAAAAAGACATCGAACAGCTGACCGTC
GATATAGAACACAAGAACAAAGAATATAAGACAGCCATAACCAATATTGCCTGGGGTGGTTTCGGAGGGCCCATCGGGGT
TGCTATCACGGGAGGCATTTTTGGCGCCCAGGCGGAAAAAATCCGGAAAGAAAAAAACCGGATGATCGCCTCCAAGAACC
TCAAGGTTCAGACACTCAAGGAAAAAGTTCCGTTGGCCGCCGCCGTACGCAGCCTGCAGATACTCTTCGAGGATATGAAT
ATTCGCATGATGGACGCTCATCAGAGTGCGACCAATCTGAAAGACCTATGGACCCTGCTGGCGGCATACATTGACAGCTC
TGCAGATGAACTGGCAGCGATCAGCGACGATCAGGCACTGATGATTTTCGCTATACGGTTTCAGGCCGTAGTCACGCCGT
GGCTGGAAATAAAAAGCATGACCGCCCAGTTACTGAAGCTGTTTGAAAGTGCGCTGGACCAGTTTCAACACGAACAGCAA
TCCAGCCTGAAAGGACAATGA

Upstream 100 bases:

>100_bases
AAAAACACCTTTATAGTCGTTGTGGCTGATTATAGATAATCAGATAAAAGTTCTGGAGCCTTTTGCTCCGGCAGAATAAA
CCGCACAAGGAACGTGCCTT

Downstream 100 bases:

>100_bases
CCATGAGCACTGAAACCTTGGGTAAGCCGATGGTCCTCACGCCTCCCGATACTGAAATCATGAATGCCGCCAGCCAGAAT
ATTCTGGCCCAGGTGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MLSQAALMENDTLARVTLKPVEYLNLILDDEKKGGRGAALILTKEDILSLKRYERHALNIPTSLARVEQQLGFTTISIPG
LEPKDMLVTYKAIHNHGKSWLGIEDAIKRSGFTIDLFAAHFSDQGRQIISYIEKMDFARQLGLTVVDLTLEEVRDTSPTP
LGQTDQKVCITLAQFLKETASQIKNHQHAASTLAQHIDTFSTVLSVQLIPGINDKVKLAKRSDLDQQISELEKDIEQLTV
DIEHKNKEYKTAITNIAWGGFGGPIGVAITGGIFGAQAEKIRKEKNRMIASKNLKVQTLKEKVPLAAAVRSLQILFEDMN
IRMMDAHQSATNLKDLWTLLAAYIDSSADELAAISDDQALMIFAIRFQAVVTPWLEIKSMTAQLLKLFESALDQFQHEQQ
SSLKGQ

Sequences:

>Translated_406_residues
MLSQAALMENDTLARVTLKPVEYLNLILDDEKKGGRGAALILTKEDILSLKRYERHALNIPTSLARVEQQLGFTTISIPG
LEPKDMLVTYKAIHNHGKSWLGIEDAIKRSGFTIDLFAAHFSDQGRQIISYIEKMDFARQLGLTVVDLTLEEVRDTSPTP
LGQTDQKVCITLAQFLKETASQIKNHQHAASTLAQHIDTFSTVLSVQLIPGINDKVKLAKRSDLDQQISELEKDIEQLTV
DIEHKNKEYKTAITNIAWGGFGGPIGVAITGGIFGAQAEKIRKEKNRMIASKNLKVQTLKEKVPLAAAVRSLQILFEDMN
IRMMDAHQSATNLKDLWTLLAAYIDSSADELAAISDDQALMIFAIRFQAVVTPWLEIKSMTAQLLKLFESALDQFQHEQQ
SSLKGQ
>Mature_406_residues
MLSQAALMENDTLARVTLKPVEYLNLILDDEKKGGRGAALILTKEDILSLKRYERHALNIPTSLARVEQQLGFTTISIPG
LEPKDMLVTYKAIHNHGKSWLGIEDAIKRSGFTIDLFAAHFSDQGRQIISYIEKMDFARQLGLTVVDLTLEEVRDTSPTP
LGQTDQKVCITLAQFLKETASQIKNHQHAASTLAQHIDTFSTVLSVQLIPGINDKVKLAKRSDLDQQISELEKDIEQLTV
DIEHKNKEYKTAITNIAWGGFGGPIGVAITGGIFGAQAEKIRKEKNRMIASKNLKVQTLKEKVPLAAAVRSLQILFEDMN
IRMMDAHQSATNLKDLWTLLAAYIDSSADELAAISDDQALMIFAIRFQAVVTPWLEIKSMTAQLLKLFESALDQFQHEQQ
SSLKGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45221; Mature: 45221

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQAALMENDTLARVTLKPVEYLNLILDDEKKGGRGAALILTKEDILSLKRYERHALNI
CCCCHHHHCCCCEEEEEECHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCC
PTSLARVEQQLGFTTISIPGLEPKDMLVTYKAIHNHGKSWLGIEDAIKRSGFTIDLFAAH
CHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEHH
FSDQGRQIISYIEKMDFARQLGLTVVDLTLEEVRDTSPTPLGQTDQKVCITLAQFLKETA
HCCCHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
SQIKNHQHAASTLAQHIDTFSTVLSVQLIPGINDKVKLAKRSDLDQQISELEKDIEQLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHEE
DIEHKNKEYKTAITNIAWGGFGGPIGVAITGGIFGAQAEKIRKEKNRMIASKNLKVQTLK
EHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EKVPLAAAVRSLQILFEDMNIRMMDAHQSATNLKDLWTLLAAYIDSSADELAAISDDQAL
HHCCHHHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHHCCCHHHHHHCCCCCEE
MIFAIRFQAVVTPWLEIKSMTAQLLKLFESALDQFQHEQQSSLKGQ
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSQAALMENDTLARVTLKPVEYLNLILDDEKKGGRGAALILTKEDILSLKRYERHALNI
CCCCHHHHCCCCEEEEEECHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCC
PTSLARVEQQLGFTTISIPGLEPKDMLVTYKAIHNHGKSWLGIEDAIKRSGFTIDLFAAH
CHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEHH
FSDQGRQIISYIEKMDFARQLGLTVVDLTLEEVRDTSPTPLGQTDQKVCITLAQFLKETA
HCCCHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
SQIKNHQHAASTLAQHIDTFSTVLSVQLIPGINDKVKLAKRSDLDQQISELEKDIEQLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHEE
DIEHKNKEYKTAITNIAWGGFGGPIGVAITGGIFGAQAEKIRKEKNRMIASKNLKVQTLK
EHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EKVPLAAAVRSLQILFEDMNIRMMDAHQSATNLKDLWTLLAAYIDSSADELAAISDDQAL
HHCCHHHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHHCCCHHHHHHCCCCCEE
MIFAIRFQAVVTPWLEIKSMTAQLLKLFESALDQFQHEQQSSLKGQ
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA