Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is ycgI [H]
Identifier: 66047203
GI number: 66047203
Start: 4723366
End: 4723983
Strand: Direct
Name: ycgI [H]
Synonym: Psyr_3976
Alternate gene names: 66047203
Gene position: 4723366-4723983 (Clockwise)
Preceding gene: 66047202
Following gene: 66047204
Centisome position: 77.51
GC content: 61.49
Gene sequence:
>618_bases ATGAACTCACCCACTCATCTTTGCTGCGACGCGACCATCCCGGCCGGCGAGCCCTTTCTGGCCGAGGTCAAGGCCGGGCA GACCGTGCGCATCCTCGACCTGCAAGGCAATCAGGCCGTCGACACGCTGTTTTTCAGCCTGAGCAACCCGCGTGAACGCT ACGACGTGCAGCGCACCCTGCGCCGTCAGAACAGCGTGTACCTGACCACCGGCAGCGTGCTGTTTTCCAACCTCGGCCAG CCGATGCTGACCATTGTCGATGACACCTGCGGTCGCCACGACACACTCGGTGGCGCGTGCGCGCAAGAGAGCAACACCGT GCGCTACGCCCTGGAAAAGCGCTACATGCACAGCTGCCGCGACAACTATCTGCGCGCCTGTGTGCATGACGGCCGTCTGA GCAAGGCCGACATCGGCCCCAACATCAATTTCTTCATGAACGTACCCGTGACCGCCGAAGGCGGCCTGACCTTCGAAGAC GGTATTTCCGCGCCCGGCAAATACGTCGAGCTGCGCGCTGAAATGGACGTGATCGTGCTGATTTCCAACTGTCCACAGCT CAACAACCCCTGCAACGGCTACAACCCGACGCCTGCGCAGTTGTTGATTCGCGACTGA
Upstream 100 bases:
>100_bases AAGCCGACGCCAGCGTTGCCGAGCACTGCCGCACCTCGCGCCCGGAAAACGCGCGCGGCTTCATCAATACCGACCGCCTG TTCGCCTGAGGAGCCTTGTC
Downstream 100 bases:
>100_bases CCCGGCACCTGCCCTCAGCAACGGACGACCGTTGCGTAGATTGATCAATAGCGGGACGGCCCGCTTCCCATCACGAAACC GAGTGCGACTGGGTTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNSPTHLCCDATIPAGEPFLAEVKAGQTVRILDLQGNQAVDTLFFSLSNPRERYDVQRTLRRQNSVYLTTGSVLFSNLGQ PMLTIVDDTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNYLRACVHDGRLSKADIGPNINFFMNVPVTAEGGLTFED GISAPGKYVELRAEMDVIVLISNCPQLNNPCNGYNPTPAQLLIRD
Sequences:
>Translated_205_residues MNSPTHLCCDATIPAGEPFLAEVKAGQTVRILDLQGNQAVDTLFFSLSNPRERYDVQRTLRRQNSVYLTTGSVLFSNLGQ PMLTIVDDTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNYLRACVHDGRLSKADIGPNINFFMNVPVTAEGGLTFED GISAPGKYVELRAEMDVIVLISNCPQLNNPCNGYNPTPAQLLIRD >Mature_205_residues MNSPTHLCCDATIPAGEPFLAEVKAGQTVRILDLQGNQAVDTLFFSLSNPRERYDVQRTLRRQNSVYLTTGSVLFSNLGQ PMLTIVDDTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNYLRACVHDGRLSKADIGPNINFFMNVPVTAEGGLTFED GISAPGKYVELRAEMDVIVLISNCPQLNNPCNGYNPTPAQLLIRD
Specific function: Unknown
COG id: COG3665
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018959 [H]
Pfam domain/function: PF09347 DUF1989 [H]
EC number: NA
Molecular weight: Translated: 22615; Mature: 22615
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPTHLCCDATIPAGEPFLAEVKAGQTVRILDLQGNQAVDTLFFSLSNPRERYDVQRTL CCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHH RRQNSVYLTTGSVLFSNLGQPMLTIVDDTCGRHDTLGGACAQESNTVRYALEKRYMHSCR HHCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DNYLRACVHDGRLSKADIGPNINFFMNVPVTAEGGLTFEDGISAPGKYVELRAEMDVIVL HHHHHHHHCCCCCCCCCCCCCCEEEEECCEECCCCEEECCCCCCCCCEEEEEECCEEEEE ISNCPQLNNPCNGYNPTPAQLLIRD EECCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MNSPTHLCCDATIPAGEPFLAEVKAGQTVRILDLQGNQAVDTLFFSLSNPRERYDVQRTL CCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHH RRQNSVYLTTGSVLFSNLGQPMLTIVDDTCGRHDTLGGACAQESNTVRYALEKRYMHSCR HHCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DNYLRACVHDGRLSKADIGPNINFFMNVPVTAEGGLTFEDGISAPGKYVELRAEMDVIVL HHHHHHHHCCCCCCCCCCCCCCEEEEECCEECCCCEEECCCCCCCCCEEEEEECCEEEEE ISNCPQLNNPCNGYNPTPAQLLIRD EECCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 10568751 [H]