Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66045848
Identifier: 66045848
GI number: 66045848
Start: 3095877
End: 3096938
Strand: Direct
Name: 66045848
Synonym: Psyr_2612
Alternate gene names: NA
Gene position: 3095877-3096938 (Clockwise)
Preceding gene: 66045841
Following gene: 66045849
Centisome position: 50.8
GC content: 61.96
Gene sequence:
>1062_bases ATGAGTCTTCAAGCTAACACTGCGCCCGTTTTCGCTGATGAACAGCAAACGGATGCGCCAACCTGGCCCGACAAGGCCGC TGACCCGTCGGTACGGTTGTCCCTGCTGGCTACCGGTAACAGTTTGCCTGTGGTGATCGAGCCAACGGCTGACGGGCTGG ACCCGGTGCAGTGGGCCAGCGCCCGGCGCGAAGCGATCGAGACGCTGCTGTGCCGTCACGGCGCGGTCTTGTTTCGGGGA TTTGATCTGCCTTCGGTCGCGGCCTTCGAAGGCTTTGCCGAGGCGCTTTCGCCTGGCTTGCACGGCACGTACGGCGACCT TCCGAAGAAGGAAGGCGGGCGCAATGTCTATCGCTCAACGCCGTATCCCGAGCGCGAGATGATCCTCTATCACAACGAGA GTTCGCACCTGGAAAGCTGGCCACGCAAGCAATGGTTCTTCTGCGAGCAGCCATCGCGGGTGGGTGGGGCAACGCCGCTG GCGGATATCCGTCAAGTGCTCGCGTACCTGCCGAAAGAGGTGGTCGAGCGCTTCGAGAGCAAAGGTCTGCTTTACAGCCG CACCTTCACCGCCGGTGTCGAGCCGAGCTGGGAATCGTTCTTCGGTACGTCCGAACGCAGCGTTATCGAACAGCGTTGCC GCGAGCAAGGTACGGACTTCGAATGGCTTGACGGCGACACCCTGCAGCTGCGCACCCAGTGCCCGGCGGTGATCACCCAT CCATTCACGGGCGAGCGTTGTTTCTTCAACCAGGTGCAGTTGCATCACCCGTACTGCATGGGCGAGGAGCTGCGAGAGGA CCTGCTCGACATGTTCGGCCCCGACCGCCTGCCACGGTTGGTCAGCTATGGCGACGGCTCAGCCATCGAGGACCCGGTAA TGGCCTTGATCGGTGAAGCCTACGAGGCTTGCGCTGTGCGTTTCGAATGGCGCAAGGGCGATGTGGTGATGCTTGACAAC ATGCTTGCCGCCCACGCCCGTGATCCTTATGAAGAACCTCGGCTGATCGTTGTCGCCATGGGCGAAATGACCGCTCGGGG CGACGTTTGGCAACCGGCCTGA
Upstream 100 bases:
>100_bases CTTAGGCCATCAGTGTTTTTATTCTTGCGCGGTGCCGGAGCGTGCTGGTCTGGCGCCCTACAAAAGTGGATGTGAAGGGC TGAGGTCCAGGAGTTTGTTC
Downstream 100 bases:
>100_bases ATGATCGACATCCCGTTATCAAGCCAGGACTTTTAACCACCGGCGCCCGCGCTGGCTAATGCATTCAAGGGCAGCAGCTA ATGAAAACCAAGCAAGAGAA
Product: syrP protein, putative
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSLQANTAPVFADEQQTDAPTWPDKAADPSVRLSLLATGNSLPVVIEPTADGLDPVQWASARREAIETLLCRHGAVLFRG FDLPSVAAFEGFAEALSPGLHGTYGDLPKKEGGRNVYRSTPYPEREMILYHNESSHLESWPRKQWFFCEQPSRVGGATPL ADIRQVLAYLPKEVVERFESKGLLYSRTFTAGVEPSWESFFGTSERSVIEQRCREQGTDFEWLDGDTLQLRTQCPAVITH PFTGERCFFNQVQLHHPYCMGEELREDLLDMFGPDRLPRLVSYGDGSAIEDPVMALIGEAYEACAVRFEWRKGDVVMLDN MLAAHARDPYEEPRLIVVAMGEMTARGDVWQPA
Sequences:
>Translated_353_residues MSLQANTAPVFADEQQTDAPTWPDKAADPSVRLSLLATGNSLPVVIEPTADGLDPVQWASARREAIETLLCRHGAVLFRG FDLPSVAAFEGFAEALSPGLHGTYGDLPKKEGGRNVYRSTPYPEREMILYHNESSHLESWPRKQWFFCEQPSRVGGATPL ADIRQVLAYLPKEVVERFESKGLLYSRTFTAGVEPSWESFFGTSERSVIEQRCREQGTDFEWLDGDTLQLRTQCPAVITH PFTGERCFFNQVQLHHPYCMGEELREDLLDMFGPDRLPRLVSYGDGSAIEDPVMALIGEAYEACAVRFEWRKGDVVMLDN MLAAHARDPYEEPRLIVVAMGEMTARGDVWQPA >Mature_352_residues SLQANTAPVFADEQQTDAPTWPDKAADPSVRLSLLATGNSLPVVIEPTADGLDPVQWASARREAIETLLCRHGAVLFRGF DLPSVAAFEGFAEALSPGLHGTYGDLPKKEGGRNVYRSTPYPEREMILYHNESSHLESWPRKQWFFCEQPSRVGGATPLA DIRQVLAYLPKEVVERFESKGLLYSRTFTAGVEPSWESFFGTSERSVIEQRCREQGTDFEWLDGDTLQLRTQCPAVITHP FTGERCFFNQVQLHHPYCMGEELREDLLDMFGPDRLPRLVSYGDGSAIEDPVMALIGEAYEACAVRFEWRKGDVVMLDNM LAAHARDPYEEPRLIVVAMGEMTARGDVWQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39603; Mature: 39472
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQANTAPVFADEQQTDAPTWPDKAADPSVRLSLLATGNSLPVVIEPTADGLDPVQWAS CCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHH ARREAIETLLCRHGAVLFRGFDLPSVAAFEGFAEALSPGLHGTYGDLPKKEGGRNVYRST HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PYPEREMILYHNESSHLESWPRKQWFFCEQPSRVGGATPLADIRQVLAYLPKEVVERFES CCCCCCEEEEECCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KGLLYSRTFTAGVEPSWESFFGTSERSVIEQRCREQGTDFEWLDGDTLQLRTQCPAVITH CCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEEEC PFTGERCFFNQVQLHHPYCMGEELREDLLDMFGPDRLPRLVSYGDGSAIEDPVMALIGEA CCCCCCHHHCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHH YEACAVRFEWRKGDVVMLDNMLAAHARDPYEEPRLIVVAMGEMTARGDVWQPA HHHHEEEEEECCCCEEEEHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SLQANTAPVFADEQQTDAPTWPDKAADPSVRLSLLATGNSLPVVIEPTADGLDPVQWAS CCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHH ARREAIETLLCRHGAVLFRGFDLPSVAAFEGFAEALSPGLHGTYGDLPKKEGGRNVYRST HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PYPEREMILYHNESSHLESWPRKQWFFCEQPSRVGGATPLADIRQVLAYLPKEVVERFES CCCCCCEEEEECCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KGLLYSRTFTAGVEPSWESFFGTSERSVIEQRCREQGTDFEWLDGDTLQLRTQCPAVITH CCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEEEC PFTGERCFFNQVQLHHPYCMGEELREDLLDMFGPDRLPRLVSYGDGSAIEDPVMALIGEA CCCCCCHHHCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHH YEACAVRFEWRKGDVVMLDNMLAAHARDPYEEPRLIVVAMGEMTARGDVWQPA HHHHEEEEEECCCCEEEEHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA