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The map label for this gene is 66045525

Identifier: 66045525

GI number: 66045525

Start: 2655723

End: 2656328

Strand: Direct

Name: 66045525

Synonym: Psyr_2285

Alternate gene names: NA

Gene position: 2655723-2656328 (Clockwise)

Preceding gene: 66045524

Following gene: 66045526

Centisome position: 43.58

GC content: 60.56

Gene sequence:

>606_bases
ATGACGCAACATCTGACACGCCGCGAGGTGGTCGCCGGCCTCTCGTTGCTGAGCCTTGGCCTGCTGACCGGCTGCGGCAG
TTCCAACGCACTGCCGTTCAAGCACGGCAAGGACATGAGCAACGAGATTGTCGGCCGCAACTTCCGGCTCAAGGATTCGC
AAGGCAACGTCAAGACCTTGTCCAGCTTTCGCGGCCTCATGCCGATGATCTTCTTCGGTTTCACCCAGTGCCCGGCCATC
TGCCCCACGGCGCTGGCGCGGGCTGCGCAGATCAGGAAACTGATGGGCGAGGAGGGCAAAACGCTGCAGGTGGTGTTCAT
TACCCTGGACCCGGAGCGCGACACGCCCGAAGTGATCGACGCCTACGTGAAGGCCTTCGATCCGACCTTTGTCGCACTGT
CCGGCACGCTTGAAGAAACGGCGGCAACGGCCAAGGAGTTCGGCGTATTCTTCGAGAAGGTCCCGCTGGGTGACACCTAC
ACGATCTCGCACACTGCCACCAGTTACGTTTACGACACCCGCGGTGTATTGCGCCTGGGCTTGTCGCACAGGCTGTCCGC
CCAACAATGCACCGAAGATCTGCTCACTTTGATGGAAGTATGCTGA

Upstream 100 bases:

>100_bases
GATACAGGATTGGCGGTATTCCCCATTGTCCTTGAGTGGTAAATTCGCCGCCTTTGAATTTGTCTGAATCCACGCGCCTT
ATCCTCAGGGGACGCATGAC

Downstream 100 bases:

>100_bases
TGACCGTTCTGATTCGTAACGTCGCAAAACCGCTGTTGCTGACCCTTTCGCTGTTGGGCCTGAGCGCTCAGGCCCTGGCC
GAAACACACGTCGATGACGC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTQHLTRREVVAGLSLLSLGLLTGCGSSNALPFKHGKDMSNEIVGRNFRLKDSQGNVKTLSSFRGLMPMIFFGFTQCPAI
CPTALARAAQIRKLMGEEGKTLQVVFITLDPERDTPEVIDAYVKAFDPTFVALSGTLEETAATAKEFGVFFEKVPLGDTY
TISHTATSYVYDTRGVLRLGLSHRLSAQQCTEDLLTLMEVC

Sequences:

>Translated_201_residues
MTQHLTRREVVAGLSLLSLGLLTGCGSSNALPFKHGKDMSNEIVGRNFRLKDSQGNVKTLSSFRGLMPMIFFGFTQCPAI
CPTALARAAQIRKLMGEEGKTLQVVFITLDPERDTPEVIDAYVKAFDPTFVALSGTLEETAATAKEFGVFFEKVPLGDTY
TISHTATSYVYDTRGVLRLGLSHRLSAQQCTEDLLTLMEVC
>Mature_200_residues
TQHLTRREVVAGLSLLSLGLLTGCGSSNALPFKHGKDMSNEIVGRNFRLKDSQGNVKTLSSFRGLMPMIFFGFTQCPAIC
PTALARAAQIRKLMGEEGKTLQVVFITLDPERDTPEVIDAYVKAFDPTFVALSGTLEETAATAKEFGVFFEKVPLGDTYT
ISHTATSYVYDTRGVLRLGLSHRLSAQQCTEDLLTLMEVC

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=156, Percent_Identity=32.0512820512821, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI281182722, Length=156, Percent_Identity=32.0512820512821, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI281182716, Length=156, Percent_Identity=32.0512820512821, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI153791313, Length=156, Percent_Identity=32.0512820512821, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI4759068, Length=143, Percent_Identity=33.5664335664336, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17531419, Length=149, Percent_Identity=28.1879194630872, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319511, Length=136, Percent_Identity=36.0294117647059, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319498, Length=155, Percent_Identity=30.3225806451613, Blast_Score=89, Evalue=6e-19,
Organism=Drosophila melanogaster, GI19920710, Length=200, Percent_Identity=32, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22018; Mature: 21886

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHLTRREVVAGLSLLSLGLLTGCGSSNALPFKHGKDMSNEIVGRNFRLKDSQGNVKTL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCHHHH
SSFRGLMPMIFFGFTQCPAICPTALARAAQIRKLMGEEGKTLQVVFITLDPERDTPEVID
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHH
AYVKAFDPTFVALSGTLEETAATAKEFGVFFEKVPLGDTYTISHTATSYVYDTRGVLRLG
HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHEECCCHHHHHH
LSHRLSAQQCTEDLLTLMEVC
HHHCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TQHLTRREVVAGLSLLSLGLLTGCGSSNALPFKHGKDMSNEIVGRNFRLKDSQGNVKTL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCHHHH
SSFRGLMPMIFFGFTQCPAICPTALARAAQIRKLMGEEGKTLQVVFITLDPERDTPEVID
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHH
AYVKAFDPTFVALSGTLEETAATAKEFGVFFEKVPLGDTYTISHTATSYVYDTRGVLRLG
HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHEECCCHHHHHH
LSHRLSAQQCTEDLLTLMEVC
HHHCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]