| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gnl [H]
Identifier: 66045475
GI number: 66045475
Start: 2597177
End: 2598277
Strand: Direct
Name: gnl [H]
Synonym: Psyr_2235
Alternate gene names: 66045475
Gene position: 2597177-2598277 (Clockwise)
Preceding gene: 66045471
Following gene: 66045476
Centisome position: 42.62
GC content: 60.31
Gene sequence:
>1101_bases ATGCTCATCATGGAACTCTCATCATCAGGCAGCACACCCGATCAAAGCCGCAGGGGCTTTCTCAAGCAGTCGCTGGCCGT TTCGGCAACCGTTGCCGCCATTGGCGCATTGCCGCGTCTTTCCAGCGCTCAGCCGCTGACCCAGCGTTATCCCGACCCTT TGGTCAGTGTGCTGGACGACAGCTTTACCCACATACGAATATTCAATGCCAGCGTCGAGAAACTGGCCAGCGGCATGCGC TGGGCCGAAGGGCCGGTGTGGATCGGTGACGGTCGCTACCTGCTGGTCAGCGATATTGCCAACAATCGCATCATGCGCTG GGACGAGGTGACGGGTGAGCTGTCGGTGTACCGCGAGCACTCGAACTTTTCCAATGGCATGTGTCGCGACCGTCAGGGCC GGCTGCTGGTTTGTGAGGGCTCCAGCACGACCACCGAGGGGCGGCGCGTGACGCGTACCGAGTACAACGGGCGCATCACT GTGCTGGCCGACAGATTCGAGGGCAAACCTTTCAATTCGCCCAATGACATCGCCTGCAAACGTGATGGGTCTATCTGGTT CACCGATCCCACCTTCCAGGCCGAAAGCAACTACGAAGGTCAAAAGGTCAAGCAGGAGCAACCCTTCGGCGTCTATCGCA TAGACCCCGCGAACGGCAAAGTCTCCAGGGTGATCGATGATCTGGCAGGTCCGAATGGTTTGTGCTTCTCGCCGGACGAG AAAACCTTGTATGTGGTCGAGGGGCGCGCCAAACCCCACGGCCTCATCTGGGCGATAGCGGTCAACGAAGACGGCACGCT GGGCGAGCGGGGCAAGCTCATCGAAGGCCTGGACTACGCGGCGATCGACGGCATCAAGTGCGACGAGAGCGGCAATCTGT GGTGCGGCTGGGGCGGTAACGGTGATCCCAAGGCGGATATGGAGAAACTCGACGGTGTACGAGTGTTCAACCCTCAAGGC AAGGCCATCGGCCATATCAGCCTGCCCGAGCGCTGCGCCAACGTCTGCTTCGGCGGGAGAGAGGGCAATCGGCTGTTCAT GGCCAGCAGCCATTCGCTTTATTCGGTGTTCGTGAACGCGCGCGGTGCCACGTTTGCCTGA
Upstream 100 bases:
>100_bases AGTCTGATCGCAAACGGCCATTATTCAAGCCGCCCAGCGGTATCTTGTAGGATGACGTGCGGCCGCAAGACGCGCGCCTT TCCGATAATAAAGATAATGG
Downstream 100 bases:
>100_bases CAGCGCGTGACCCGATGACGGCGTATGACACGACGCGTCGTCAATCGGGTCGAACCCCTCGGACTATGCCCGGTCTGTTC CTGTAATTACTTTCAGGGAT
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLIMELSSSGSTPDQSRRGFLKQSLAVSATVAAIGALPRLSSAQPLTQRYPDPLVSVLDDSFTHIRIFNASVEKLASGMR WAEGPVWIGDGRYLLVSDIANNRIMRWDEVTGELSVYREHSNFSNGMCRDRQGRLLVCEGSSTTTEGRRVTRTEYNGRIT VLADRFEGKPFNSPNDIACKRDGSIWFTDPTFQAESNYEGQKVKQEQPFGVYRIDPANGKVSRVIDDLAGPNGLCFSPDE KTLYVVEGRAKPHGLIWAIAVNEDGTLGERGKLIEGLDYAAIDGIKCDESGNLWCGWGGNGDPKADMEKLDGVRVFNPQG KAIGHISLPERCANVCFGGREGNRLFMASSHSLYSVFVNARGATFA
Sequences:
>Translated_366_residues MLIMELSSSGSTPDQSRRGFLKQSLAVSATVAAIGALPRLSSAQPLTQRYPDPLVSVLDDSFTHIRIFNASVEKLASGMR WAEGPVWIGDGRYLLVSDIANNRIMRWDEVTGELSVYREHSNFSNGMCRDRQGRLLVCEGSSTTTEGRRVTRTEYNGRIT VLADRFEGKPFNSPNDIACKRDGSIWFTDPTFQAESNYEGQKVKQEQPFGVYRIDPANGKVSRVIDDLAGPNGLCFSPDE KTLYVVEGRAKPHGLIWAIAVNEDGTLGERGKLIEGLDYAAIDGIKCDESGNLWCGWGGNGDPKADMEKLDGVRVFNPQG KAIGHISLPERCANVCFGGREGNRLFMASSHSLYSVFVNARGATFA >Mature_366_residues MLIMELSSSGSTPDQSRRGFLKQSLAVSATVAAIGALPRLSSAQPLTQRYPDPLVSVLDDSFTHIRIFNASVEKLASGMR WAEGPVWIGDGRYLLVSDIANNRIMRWDEVTGELSVYREHSNFSNGMCRDRQGRLLVCEGSSTTTEGRRVTRTEYNGRIT VLADRFEGKPFNSPNDIACKRDGSIWFTDPTFQAESNYEGQKVKQEQPFGVYRIDPANGKVSRVIDDLAGPNGLCFSPDE KTLYVVEGRAKPHGLIWAIAVNEDGTLGERGKLIEGLDYAAIDGIKCDESGNLWCGWGGNGDPKADMEKLDGVRVFNPQG KAIGHISLPERCANVCFGGREGNRLFMASSHSLYSVFVNARGATFA
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 40141; Mature: 40141
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIMELSSSGSTPDQSRRGFLKQSLAVSATVAAIGALPRLSSAQPLTQRYPDPLVSVLDD CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHCC SFTHIRIFNASVEKLASGMRWAEGPVWIGDGRYLLVSDIANNRIMRWDEVTGELSVYREH CCEEEEEECCCHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCEEEEHHCCCCEEEEEEC SNFSNGMCRDRQGRLLVCEGSSTTTEGRRVTRTEYNGRITVLADRFEGKPFNSPNDIACK CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEE RDGSIWFTDPTFQAESNYEGQKVKQEQPFGVYRIDPANGKVSRVIDDLAGPNGLCFSPDE ECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEECCCC KTLYVVEGRAKPHGLIWAIAVNEDGTLGERGKLIEGLDYAAIDGIKCDESGNLWCGWGGN CEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEECCCCEEEECCEEECCCCCEEEEECCC GDPKADMEKLDGVRVFNPQGKAIGHISLPERCANVCFGGREGNRLFMASSHSLYSVFVNA CCCCHHHHHCCCEEEECCCCCEEEECCCHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEC RGATFA CCCCCC >Mature Secondary Structure MLIMELSSSGSTPDQSRRGFLKQSLAVSATVAAIGALPRLSSAQPLTQRYPDPLVSVLDD CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHCC SFTHIRIFNASVEKLASGMRWAEGPVWIGDGRYLLVSDIANNRIMRWDEVTGELSVYREH CCEEEEEECCCHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCEEEEHHCCCCEEEEEEC SNFSNGMCRDRQGRLLVCEGSSTTTEGRRVTRTEYNGRITVLADRFEGKPFNSPNDIACK CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEE RDGSIWFTDPTFQAESNYEGQKVKQEQPFGVYRIDPANGKVSRVIDDLAGPNGLCFSPDE ECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEECCCC KTLYVVEGRAKPHGLIWAIAVNEDGTLGERGKLIEGLDYAAIDGIKCDESGNLWCGWGGN CEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEECCCCEEEECCEEECCCCCEEEEECCC GDPKADMEKLDGVRVFNPQGKAIGHISLPERCANVCFGGREGNRLFMASSHSLYSVFVNA CCCCHHHHHCCCEEEECCCCCEEEECCCHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEC RGATFA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]