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The map label for this gene is erfK [H]

Identifier: 66045310

GI number: 66045310

Start: 2415657

End: 2416622

Strand: Direct

Name: erfK [H]

Synonym: Psyr_2070

Alternate gene names: 66045310

Gene position: 2415657-2416622 (Clockwise)

Preceding gene: 66045309

Following gene: 66045312

Centisome position: 39.64

GC content: 62.11

Gene sequence:

>966_bases
ATGTTGTCGCGCATTCCAGCCGTTACCCGCTGTCTGTCGCTTGCTGCTCTGTGCGCGGCGAGCTCTGTCCATGCACTGGA
GTTTCCGTTGCCGCCGCCCGGCGAAGACATCGTGGGGCAGGTGCAGGTCATCAAGGCCAAATACGAAGACACCTTCGCCG
ATCTGGGCACCCGATACGATCTGGGCTATCTGGAAATGATCGCTGCCAACCCTGGCGTCGATCCCTGGTTGCCGGGGGCG
GGCAAGGACATCGTGCTGCCGACCCGCTTCATTCTGCCGCCGGGTCCGCGCGAAGGGATCGTCATCAACCTTGCCGAATA
CCGCATGTATTACTACCCCAAGGGGCAGAATGTCGTGCACACCTATCCACTGGGTGTCGGTCGTGAAGGCTGGGGGTCGC
CGATCGGCGTGACCAAGGTGACGGCCAAGACGCCGAACCCGACCTGGACACCGCCGGCCTCGATCAAGGCCGAGCATGCG
GCCGATGGCGATCCGCTGCCTGACGTGGTGCCGGCCGGTCCGGACAACCCGCTGGGGCCGTTCAAATTCGGCCTGGGGCT
TTCCGGCTACCTGATCCACGGCTCGAACAAGAAGTTCGGCATTGGCATGCGCACCAGCCACGGCTGTTTCCGCATGTACA
ACAATAACGTGCTGGAACTGGCCGACATGGCTCCGGTCGGTACGACCGTGCGCATCATCAGCGAGCCTTACAAGTTCGGC
ATCAGTGGCGGCAAGGTTTACCTCGAAGCGCACACGCCGGTTGATGACCTGGGCAACCCGTCGGTGGTCGACAAGCACAC
GGCGGTGATCAACGCGCTGCTCAAGCGTGACGACCTGGCCAACAATCTGCGCATGAACTGGGACGTGGTACGTGATGTGG
TCGCGGCCGAAGACGGCATGCCGGTGGAGATCGCAGAACCGGGCAAAGCGCCTGCGAATGCTGAAGAGCCGGTGATTTTT
CAGTAA

Upstream 100 bases:

>100_bases
CCGGAAGGTCGGCCGCAGATATCCCCGATCCGGCAAGGGCCGGTGTACACTTCAGTTCTTGTTTCCATCTCTTTAGTCGT
TACCCGAAGGATCTTCCCGG

Downstream 100 bases:

>100_bases
ATCGTCGCCAGCAATTGTTCTCGTGCCAATGCGGAGCGTTGGCATGCGGTTCGTGACGCTCCGCGTCACAAGTCTTCAGC
TCAACACACCGTCATGCCGC

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTRYDLGYLEMIAANPGVDPWLPGA
GKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHA
ADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
ISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDVVRDVVAAEDGMPVEIAEPGKAPANAEEPVIF
Q

Sequences:

>Translated_321_residues
MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTRYDLGYLEMIAANPGVDPWLPGA
GKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHA
ADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
ISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDVVRDVVAAEDGMPVEIAEPGKAPANAEEPVIF
Q
>Mature_321_residues
MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTRYDLGYLEMIAANPGVDPWLPGA
GKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHA
ADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
ISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDVVRDVVAAEDGMPVEIAEPGKAPANAEEPVIF
Q

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1787040, Length=249, Percent_Identity=44.9799196787149, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1787356, Length=294, Percent_Identity=38.4353741496599, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1788299, Length=302, Percent_Identity=38.0794701986755, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787968, Length=322, Percent_Identity=34.7826086956522, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34486; Mature: 34486

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTRYD
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCEEEEEEEHHHHHHHHCCCCCC
LGYLEMIAANPGVDPWLPGAGKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVH
CCCEEEEECCCCCCCCCCCCCCCEEECEEEECCCCCCCCEEEEEEHEEEEEECCCCCEEE
TYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGP
EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
FKFGLGLSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
EEECCCCEEEEEECCCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCEEC
ISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDVVRDVVAAEDGM
CCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
PVEIAEPGKAPANAEEPVIFQ
CEEEECCCCCCCCCCCCEEEC
>Mature Secondary Structure
MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTRYD
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCEEEEEEEHHHHHHHHCCCCCC
LGYLEMIAANPGVDPWLPGAGKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVH
CCCEEEEECCCCCCCCCCCCCCCEEECEEEECCCCCCCCEEEEEEHEEEEEECCCCCEEE
TYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGP
EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
FKFGLGLSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
EEECCCCEEEEEECCCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCEEC
ISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDVVRDVVAAEDGM
CCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
PVEIAEPGKAPANAEEPVIFQ
CEEEECCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883701; 11677609 [H]