Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045275
Identifier: 66045275
GI number: 66045275
Start: 2362151
End: 2363689
Strand: Direct
Name: 66045275
Synonym: Psyr_2035
Alternate gene names: NA
Gene position: 2362151-2363689 (Clockwise)
Preceding gene: 66045274
Following gene: 66045281
Centisome position: 38.76
GC content: 58.09
Gene sequence:
>1539_bases ATGGGCATGGCGGTCGGCAAACGGGTCGGCCACCGCTTCCTCATGCTGGAGGCCCGGCTCATGTCTGTTATTTCAAAGTG GATCGAACGGATCAGAATCCTGTTCTGGCCGGTTTCAAGGCGCAAGAGCATGTTGCTTGCGCCGCCGATGGTCGCCGAAC TTCTTCCTGACATACCTGGCGGTGAGCCTAATTTGCTCCCCAGCAGCGCCTGGCTCGTGCCGTTGCGGGTCGATTTTCCC ATGTGGCAAAACTCCGAGCCTACCCCGGGCAATCCCGAGTATCTGCGCGTGTACTGGAATGACGTGCTGCTGGAGGAGAA GACCTGGACCGCACCTGTACAGCCTGTCGATCTGTTCATCATGATCGCGCAGCAATACCTGATCGAAGGCCGGCATCGAC TCCGTTATCGCGTCGAGACCTCCAATCAGGTGCAGACCGAATCCGAAACACTGGTCTTTGTCATTGATAAAACGGCACCG GTATTCAAAGACGAAGGGGCGCTGATTTTTCCGGAAGAAATCATCAGGGATGGTCTCACGGCGGCCTGGCTGGATACTCA TGGCGATACCGTGCTGGCCGAGGTGCCCGCGTATTTTTCGCCGGGCGCCGGGGACCTCATTATCTGGTACTGGAGCAGCA TGCCGACGGGGTCGGAGCACACCGGAACCCTGACGCTTGAAGCGTCCGATATCGGTGGCGCGATCAACATCGGTTTTGGC CGGCAAGTGGTTCTCGAGAGCGGCGATGGCATTCGTTATGTGTCCTACAGGCTGAAGGATCGCTCGGGGAATGCCGGGCC TCGTGCGCTGGCTGTTGCGCTGCTGGTGTGCGCTCAGCCAGTGCCGCGCGTGTTGCCACCCCCTCGTGTTCAGAAGGCTG CAGGCTCGGCAAGTGCCAGCAGGCTTGATCCGGTCGATGCCTTTCAGGGCGCAGTGGTATCGATACCGGAGGATGCCGTG ATTCTTCCCGGTGAAACCGTCCGCGTCCAATGGGCCGAGCCAGGCAGTGTGGGCTCTTTTCTTACGGAAATCGCAGACTC GAGACTGTTCAGCGTTCCTTCCACAAAAATTGCCCCGCATTTCAGCAAGTCCATCCCGGTGTACTACGAGGTGTTCGAAA AAAGCGTCGACTCACCCCATCTTTCGGACCGGCATACGTTGAGTATCCTGGGAATGACAGGCTTTCCGGTCGTGCAGTGT GACAAGGTATCCGGAGGGCGTCTGAGCCTGCAGAGCATTGCCGAGGGAGATTACGCGCGGTTCACGCTCGACAGTTGGTC TTTCATGGGCACTGACCAGTTTGTCAGCGTCGAGGTGCACGGCGTCGGCAGTGCTGATAATGAGTCGTTAGTGGTTAGCG TGCTGGACGAGTACCCGGTACCGCTGGTGGGCGATAACATCGACGCCGGTCGTATCAGCAAAACGGATTTGACTAGATTT CTGATCGGCACTCAGCTGGATGTGCGGGTGCGTGTGAGTTTCGACCAGACACTCTCGTGGCAGCCTTTCCCTTCACTGAG ACCAACGTTGTATGCCTGA
Upstream 100 bases:
>100_bases CAGCGAAGCGGGGCGGATGATGTCTGATCGCTGGACGCTGATGCGCCAACGGTCCTATCACTTGTGCCAGTATCCGCAGA AAAAAGCAGGGTGTTAACTG
Downstream 100 bases:
>100_bases GGAAATCATGGACCGCCAGGTTGGCAGTCCATGGTGCATTGCTACTTGTAGGTCATCGTGAAGCTGAGCGCCCCTTTGGC CTTGCCCGGCCGGATCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MGMAVGKRVGHRFLMLEARLMSVISKWIERIRILFWPVSRRKSMLLAPPMVAELLPDIPGGEPNLLPSSAWLVPLRVDFP MWQNSEPTPGNPEYLRVYWNDVLLEEKTWTAPVQPVDLFIMIAQQYLIEGRHRLRYRVETSNQVQTESETLVFVIDKTAP VFKDEGALIFPEEIIRDGLTAAWLDTHGDTVLAEVPAYFSPGAGDLIIWYWSSMPTGSEHTGTLTLEASDIGGAINIGFG RQVVLESGDGIRYVSYRLKDRSGNAGPRALAVALLVCAQPVPRVLPPPRVQKAAGSASASRLDPVDAFQGAVVSIPEDAV ILPGETVRVQWAEPGSVGSFLTEIADSRLFSVPSTKIAPHFSKSIPVYYEVFEKSVDSPHLSDRHTLSILGMTGFPVVQC DKVSGGRLSLQSIAEGDYARFTLDSWSFMGTDQFVSVEVHGVGSADNESLVVSVLDEYPVPLVGDNIDAGRISKTDLTRF LIGTQLDVRVRVSFDQTLSWQPFPSLRPTLYA
Sequences:
>Translated_512_residues MGMAVGKRVGHRFLMLEARLMSVISKWIERIRILFWPVSRRKSMLLAPPMVAELLPDIPGGEPNLLPSSAWLVPLRVDFP MWQNSEPTPGNPEYLRVYWNDVLLEEKTWTAPVQPVDLFIMIAQQYLIEGRHRLRYRVETSNQVQTESETLVFVIDKTAP VFKDEGALIFPEEIIRDGLTAAWLDTHGDTVLAEVPAYFSPGAGDLIIWYWSSMPTGSEHTGTLTLEASDIGGAINIGFG RQVVLESGDGIRYVSYRLKDRSGNAGPRALAVALLVCAQPVPRVLPPPRVQKAAGSASASRLDPVDAFQGAVVSIPEDAV ILPGETVRVQWAEPGSVGSFLTEIADSRLFSVPSTKIAPHFSKSIPVYYEVFEKSVDSPHLSDRHTLSILGMTGFPVVQC DKVSGGRLSLQSIAEGDYARFTLDSWSFMGTDQFVSVEVHGVGSADNESLVVSVLDEYPVPLVGDNIDAGRISKTDLTRF LIGTQLDVRVRVSFDQTLSWQPFPSLRPTLYA >Mature_511_residues GMAVGKRVGHRFLMLEARLMSVISKWIERIRILFWPVSRRKSMLLAPPMVAELLPDIPGGEPNLLPSSAWLVPLRVDFPM WQNSEPTPGNPEYLRVYWNDVLLEEKTWTAPVQPVDLFIMIAQQYLIEGRHRLRYRVETSNQVQTESETLVFVIDKTAPV FKDEGALIFPEEIIRDGLTAAWLDTHGDTVLAEVPAYFSPGAGDLIIWYWSSMPTGSEHTGTLTLEASDIGGAINIGFGR QVVLESGDGIRYVSYRLKDRSGNAGPRALAVALLVCAQPVPRVLPPPRVQKAAGSASASRLDPVDAFQGAVVSIPEDAVI LPGETVRVQWAEPGSVGSFLTEIADSRLFSVPSTKIAPHFSKSIPVYYEVFEKSVDSPHLSDRHTLSILGMTGFPVVQCD KVSGGRLSLQSIAEGDYARFTLDSWSFMGTDQFVSVEVHGVGSADNESLVVSVLDEYPVPLVGDNIDAGRISKTDLTRFL IGTQLDVRVRVSFDQTLSWQPFPSLRPTLYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56434; Mature: 56303
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMAVGKRVGHRFLMLEARLMSVISKWIERIRILFWPVSRRKSMLLAPPMVAELLPDIPG CCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCHHHHHHCCCCCC GEPNLLPSSAWLVPLRVDFPMWQNSEPTPGNPEYLRVYWNDVLLEEKTWTAPVQPVDLFI CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHH MIAQQYLIEGRHRLRYRVETSNQVQTESETLVFVIDKTAPVFKDEGALIFPEEIIRDGLT HHHHHHHHCCCEEEEEEEECCCCEECCCCEEEEEEECCCCCCCCCCCEECCHHHHHCCCE AAWLDTHGDTVLAEVPAYFSPGAGDLIIWYWSSMPTGSEHTGTLTLEASDIGGAINIGFG EEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEECCC RQVVLESGDGIRYVSYRLKDRSGNAGPRALAVALLVCAQPVPRVLPPPRVQKAAGSASAS CEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC RLDPVDAFQGAVVSIPEDAVILPGETVRVQWAEPGSVGSFLTEIADSRLFSVPSTKIAPH CCCCHHHHCCCEEECCCCCEEECCCEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCC FSKSIPVYYEVFEKSVDSPHLSDRHTLSILGMTGFPVVQCDKVSGGRLSLQSIAEGDYAR CCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEHHHHCCCCEEE FTLDSWSFMGTDQFVSVEVHGVGSADNESLVVSVLDEYPVPLVGDNIDAGRISKTDLTRF EEECCCEECCCCEEEEEEEEECCCCCCCEEEEEEEHHCCCCEECCCCCCCCCCHHHHHHH LIGTQLDVRVRVSFDQTLSWQPFPSLRPTLYA HHCCEEEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure GMAVGKRVGHRFLMLEARLMSVISKWIERIRILFWPVSRRKSMLLAPPMVAELLPDIPG CCCCCHHHCCEEEEHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCHHHHHHCCCCCC GEPNLLPSSAWLVPLRVDFPMWQNSEPTPGNPEYLRVYWNDVLLEEKTWTAPVQPVDLFI CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHH MIAQQYLIEGRHRLRYRVETSNQVQTESETLVFVIDKTAPVFKDEGALIFPEEIIRDGLT HHHHHHHHCCCEEEEEEEECCCCEECCCCEEEEEEECCCCCCCCCCCEECCHHHHHCCCE AAWLDTHGDTVLAEVPAYFSPGAGDLIIWYWSSMPTGSEHTGTLTLEASDIGGAINIGFG EEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEECCC RQVVLESGDGIRYVSYRLKDRSGNAGPRALAVALLVCAQPVPRVLPPPRVQKAAGSASAS CEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC RLDPVDAFQGAVVSIPEDAVILPGETVRVQWAEPGSVGSFLTEIADSRLFSVPSTKIAPH CCCCHHHHCCCEEECCCCCEEECCCEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCC FSKSIPVYYEVFEKSVDSPHLSDRHTLSILGMTGFPVVQCDKVSGGRLSLQSIAEGDYAR CCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEHHHHCCCCEEE FTLDSWSFMGTDQFVSVEVHGVGSADNESLVVSVLDEYPVPLVGDNIDAGRISKTDLTRF EEECCCEECCCCEEEEEEEEECCCCCCCEEEEEEEHHCCCCEECCCCCCCCCCHHHHHHH LIGTQLDVRVRVSFDQTLSWQPFPSLRPTLYA HHCCEEEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA