Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is yhiQ [C]
Identifier: 66044573
GI number: 66044573
Start: 1502486
End: 1503295
Strand: Direct
Name: yhiQ [C]
Synonym: Psyr_1325
Alternate gene names: 66044573
Gene position: 1502486-1503295 (Clockwise)
Preceding gene: 66044571
Following gene: 66044581
Centisome position: 24.66
GC content: 63.58
Gene sequence:
>810_bases ATGATTGAGCAGCAAGCAGGCAGTCGTATCCGGGTCGAAGCCCTGGCCGTTGGCGGACAGGAGCAGGCGGCGCAATGGGC GCAGCGCCTGGGCCTGCCGTTGACCGATGCGCACGCTGATTTTGCACTGCAGCTTACTGACGAAGGGCTGCAGTTGCAGC AATTGGGCGATGATGCGCCAGGCGCGGTACGTGTCGATTTTGTCGAGGGCGCAGTGGCTCATCGGCGACTGTTCGGTGGT GGGACCGGGCAGATGATTGCCAAGGCGGTCGGTATTCAGCCAGGCATTCGCCCCAGCGTGCTGGATGCAACGGCAGGGCT TGGCAAGGATGCGTTCGTGCTGGCAAGTCTCGGTTGCGACATGAGCCTGATCGAGCGTCAGCCGATCATCGCTGCATTGC TGGAGGATGGTCTGGCCCGCGGGCGCGGTGATCGTGACGTCGGTTCGATCATTGCCCGGATGCGCCTGTTGACCGGCAAC TCGATCGACCTCATCCGCGCCTGGACAGGGGAGCCGCCCCAGGTGATCTACCTGGACCCGATGTTCCCGCATCGGGAGAA GACCGCCCTGGTGAAAAAGGAAATGCGCCTGTTCCGGCCGCTGGTCGGTGATGACATGGACGCGCCAGCCTTGCTGGAAG CCGCGCTGGCGCTTGCCACCCACCGCGTGGTGGTCAAACGCCCGCGCAAGGCCCCCTGCATCGACGGCCTTAAGCCGGGC TATGCGCTGGACGGCAAATCCAGCCGCTACGACATTTACCCGAAGAAAGCCTTGAAGCCCAAGGCAGCCACAGACGAGAG CGGTGCATAG
Upstream 100 bases:
>100_bases ACATAGCGATCAGTACTGGCCTTGGGTCTGGCAAAATGCCGGATACTTGGTTATCGGCAGGCTTTGCCGAACATTAACAA TTTTTGAGTGTGTAAACGCA
Downstream 100 bases:
>100_bases CGCCTATCGTCGACGGCCTGAGCCCGAATCAAACGCAGATGCGCCTGTAAATACAGGCGCGAATCCCGCACTCAAAGTGC GCCAAACACTTTCTTCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MIEQQAGSRIRVEALAVGGQEQAAQWAQRLGLPLTDAHADFALQLTDEGLQLQQLGDDAPGAVRVDFVEGAVAHRRLFGG GTGQMIAKAVGIQPGIRPSVLDATAGLGKDAFVLASLGCDMSLIERQPIIAALLEDGLARGRGDRDVGSIIARMRLLTGN SIDLIRAWTGEPPQVIYLDPMFPHREKTALVKKEMRLFRPLVGDDMDAPALLEAALALATHRVVVKRPRKAPCIDGLKPG YALDGKSSRYDIYPKKALKPKAATDESGA
Sequences:
>Translated_269_residues MIEQQAGSRIRVEALAVGGQEQAAQWAQRLGLPLTDAHADFALQLTDEGLQLQQLGDDAPGAVRVDFVEGAVAHRRLFGG GTGQMIAKAVGIQPGIRPSVLDATAGLGKDAFVLASLGCDMSLIERQPIIAALLEDGLARGRGDRDVGSIIARMRLLTGN SIDLIRAWTGEPPQVIYLDPMFPHREKTALVKKEMRLFRPLVGDDMDAPALLEAALALATHRVVVKRPRKAPCIDGLKPG YALDGKSSRYDIYPKKALKPKAATDESGA >Mature_269_residues MIEQQAGSRIRVEALAVGGQEQAAQWAQRLGLPLTDAHADFALQLTDEGLQLQQLGDDAPGAVRVDFVEGAVAHRRLFGG GTGQMIAKAVGIQPGIRPSVLDATAGLGKDAFVLASLGCDMSLIERQPIIAALLEDGLARGRGDRDVGSIIARMRLLTGN SIDLIRAWTGEPPQVIYLDPMFPHREKTALVKKEMRLFRPLVGDDMDAPALLEAALALATHRVVVKRPRKAPCIDGLKPG YALDGKSSRYDIYPKKALKPKAATDESGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=228, Percent_Identity=52.6315789473684, Blast_Score=212, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1325_PSEU2 (Q4ZWU6)
Other databases:
- EMBL: CP000075 - RefSeq: YP_234414.1 - ProteinModelPortal: Q4ZWU6 - SMR: Q4ZWU6 - STRING: Q4ZWU6 - GeneID: 3366820 - GenomeReviews: CP000075_GR - KEGG: psb:Psyr_1325 - NMPDR: fig|205918.4.peg.1639 - eggNOG: COG0500 - HOGENOM: HBG563235 - OMA: HRVVVKR - ProtClustDB: CLSK868152 - BioCyc: PSYR205918:PSYR_1325-MONOMER - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 28800; Mature: 28800
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQQAGSRIRVEALAVGGQEQAAQWAQRLGLPLTDAHADFALQLTDEGLQLQQLGDDAP CCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHCCCCCC GAVRVDFVEGAVAHRRLFGGGTGQMIAKAVGIQPGIRPSVLDATAGLGKDAFVLASLGCD CCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCCCC MSLIERQPIIAALLEDGLARGRGDRDVGSIIARMRLLTGNSIDLIRAWTGEPPQVIYLDP HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECC MFPHREKTALVKKEMRLFRPLVGDDMDAPALLEAALALATHRVVVKRPRKAPCIDGLKPG CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC YALDGKSSRYDIYPKKALKPKAATDESGA EEECCCCCCEECCCHHHCCCCCCCCCCCC >Mature Secondary Structure MIEQQAGSRIRVEALAVGGQEQAAQWAQRLGLPLTDAHADFALQLTDEGLQLQQLGDDAP CCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHCCCCCC GAVRVDFVEGAVAHRRLFGGGTGQMIAKAVGIQPGIRPSVLDATAGLGKDAFVLASLGCD CCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCCCC MSLIERQPIIAALLEDGLARGRGDRDVGSIIARMRLLTGNSIDLIRAWTGEPPQVIYLDP HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECC MFPHREKTALVKKEMRLFRPLVGDDMDAPALLEAALALATHRVVVKRPRKAPCIDGLKPG CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC YALDGKSSRYDIYPKKALKPKAATDESGA EEECCCCCCEECCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA