Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is yecE [H]
Identifier: 66044570
GI number: 66044570
Start: 1500043
End: 1500906
Strand: Direct
Name: yecE [H]
Synonym: Psyr_1322
Alternate gene names: 66044570
Gene position: 1500043-1500906 (Clockwise)
Preceding gene: 66044569
Following gene: 66044571
Centisome position: 24.62
GC content: 59.49
Gene sequence:
>864_bases GTGTCTCGTCTGCCTTACTACCTCGGTTGTCCGTCATGGAGTGAAAACGCCTGGCGCGATTCGCTGTACCCCGAAAATGC CCGCCCCAATGATTTCCTGAACCTCTACACTCAGGTGTTCAACGCTGTCGAAGGCAACACCACGTTCTATGCCCGTCCCG CCGCCACTACGGTGCAGCGCTGGGCAGAAATAATGCCCGACGATTTTCGCTTCACCGCCAAATTCCATAAAGACATCAGT CACAACGGCGACCTTCGTGAGCAGGTGGGCGCCGCTGAGGAATTCATTCGCCTGCTCGCGCCTCTGGGCGGGCGGATCGC GCCGTTCTGGCTGCAGTTGCCGGCCAGCTTCACGCCCCCGCGTCTGGCCGAGCTGGCCGGTTTTCTTGACGAGCTCAAGG TGTCTGTAGCAGTGGAAGTGCGCAACATGGCTTTCTTCATGAAAGGTGACGAAGAGCGCATGCTCAATCGCCTGTTGCTG GATCGAGGCGTCGAGCGCATCTGCCTTGATTCGCGGGCATTGTTCAGCTGTGTCTCGAGTGATCCTGCAGTCCTGCACGC CCAATCGAAAAAGCCCAAGGTGCCGCCTCGTCCGGCTTCGCTGACGCTGTTTCCTCAAGTGCGCTTCATCGGCGGTCCGG ACCTTGAGGCCAACGATCAGTTTCTGCTGCAGTGGGTGGAAAAGGTCGCCGTGTGGATTGAAGAGGGGCGCACGCCGTAT GTCTTCCTGCACACTCCGGACAACATCAGGGCTGCCGAGCAGGCCATGCGCTTTCACCAGCAACTGATGGCGCGATTGCC GGGCTTGCCGGCATTGTTCGAACTGGATCGCGGGCCTCAGGTGGAACAGTTGGGCTTGCTCTGA
Upstream 100 bases:
>100_bases TGAGCTCTCGTGTCGCCCATGCGCTGGCCAGTTATATGGCCACTGCCAGTTTTGTCGATTGGGACCTTGAAGTATCGGGG CTCGATCTGCACGTCTGATT
Downstream 100 bases:
>100_bases GGTCTTCCAGGTGTGGGCTGAAAAAGCCTGGCCTTGCGGAGAGCACGCTTATGGATGCGCAACTGCGCTGTGTTGCCCCT GTTTACAAACGCCTCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSRLPYYLGCPSWSENAWRDSLYPENARPNDFLNLYTQVFNAVEGNTTFYARPAATTVQRWAEIMPDDFRFTAKFHKDIS HNGDLREQVGAAEEFIRLLAPLGGRIAPFWLQLPASFTPPRLAELAGFLDELKVSVAVEVRNMAFFMKGDEERMLNRLLL DRGVERICLDSRALFSCVSSDPAVLHAQSKKPKVPPRPASLTLFPQVRFIGGPDLEANDQFLLQWVEKVAVWIEEGRTPY VFLHTPDNIRAAEQAMRFHQQLMARLPGLPALFELDRGPQVEQLGLL
Sequences:
>Translated_287_residues MSRLPYYLGCPSWSENAWRDSLYPENARPNDFLNLYTQVFNAVEGNTTFYARPAATTVQRWAEIMPDDFRFTAKFHKDIS HNGDLREQVGAAEEFIRLLAPLGGRIAPFWLQLPASFTPPRLAELAGFLDELKVSVAVEVRNMAFFMKGDEERMLNRLLL DRGVERICLDSRALFSCVSSDPAVLHAQSKKPKVPPRPASLTLFPQVRFIGGPDLEANDQFLLQWVEKVAVWIEEGRTPY VFLHTPDNIRAAEQAMRFHQQLMARLPGLPALFELDRGPQVEQLGLL >Mature_286_residues SRLPYYLGCPSWSENAWRDSLYPENARPNDFLNLYTQVFNAVEGNTTFYARPAATTVQRWAEIMPDDFRFTAKFHKDISH NGDLREQVGAAEEFIRLLAPLGGRIAPFWLQLPASFTPPRLAELAGFLDELKVSVAVEVRNMAFFMKGDEERMLNRLLLD RGVERICLDSRALFSCVSSDPAVLHAQSKKPKVPPRPASLTLFPQVRFIGGPDLEANDQFLLQWVEKVAVWIEEGRTPYV FLHTPDNIRAAEQAMRFHQQLMARLPGLPALFELDRGPQVEQLGLL
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=269, Percent_Identity=42.0074349442379, Blast_Score=190, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 32658; Mature: 32527
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPYYLGCPSWSENAWRDSLYPENARPNDFLNLYTQVFNAVEGNTTFYARPAATTVQR CCCCCEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH WAEIMPDDFRFTAKFHKDISHNGDLREQVGAAEEFIRLLAPLGGRIAPFWLQLPASFTPP HHHHCCCCCEEHHHHHHHCCCCCCHHHHHCHHHHHHHHHHCCCCCCCHHEEECCCCCCCH RLAELAGFLDELKVSVAVEVRNMAFFMKGDEERMLNRLLLDRGVERICLDSRALFSCVSS HHHHHHHHHHHHHHHHEEEEEHEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC DPAVLHAQSKKPKVPPRPASLTLFPQVRFIGGPDLEANDQFLLQWVEKVAVWIEEGRTPY CCEEEEECCCCCCCCCCCCCEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCE VFLHTPDNIRAAEQAMRFHQQLMARLPGLPALFELDRGPQVEQLGLL EEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCC >Mature Secondary Structure SRLPYYLGCPSWSENAWRDSLYPENARPNDFLNLYTQVFNAVEGNTTFYARPAATTVQR CCCCEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH WAEIMPDDFRFTAKFHKDISHNGDLREQVGAAEEFIRLLAPLGGRIAPFWLQLPASFTPP HHHHCCCCCEEHHHHHHHCCCCCCHHHHHCHHHHHHHHHHCCCCCCCHHEEECCCCCCCH RLAELAGFLDELKVSVAVEVRNMAFFMKGDEERMLNRLLLDRGVERICLDSRALFSCVSS HHHHHHHHHHHHHHHHEEEEEHEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC DPAVLHAQSKKPKVPPRPASLTLFPQVRFIGGPDLEANDQFLLQWVEKVAVWIEEGRTPY CCEEEEECCCCCCCCCCCCCEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCE VFLHTPDNIRAAEQAMRFHQQLMARLPGLPALFELDRGPQVEQLGLL EEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]