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The map label for this gene is bkdR [H]

Identifier: 66044423

GI number: 66044423

Start: 1326317

End: 1326796

Strand: Reverse

Name: bkdR [H]

Synonym: Psyr_1172

Alternate gene names: 66044423

Gene position: 1326796-1326317 (Counterclockwise)

Preceding gene: 66044425

Following gene: 66044422

Centisome position: 21.77

GC content: 55.83

Gene sequence:

>480_bases
ATGACCCAACCGACATTAAGCCCGATAGATGTAAGGATCCTCACGGCGCTGCAGCAGGATGGCCGTATCACCAACCAGAC
CCTGGCCGACCAGATCGGCATGTCTGCCTCGCCCTGTTGGCGACGGGTCAGGCAGCTGGAAGAACATCGCTATATCCAGG
GTTACAGAGCCGTACTGGACCGCCGCAAGATCGGGCTTGGCGTCATGGTGTTCATTCGTATCAGCATCGACAGTCATAGT
GAGGCCGAGGCCAGAAAATTCGAGAAGGAAGTCATGCAGCTGGAAGATGTCGTGGCGTGCTACAGCATCGGTGGCGATGC
GGACTTTCTGCTTCAGGTCGTAGCGCCCGATCTGGATTCCTTTGCTGACTTCGCCATGACCGTGGTCAGACGATTACCCG
GCATCAAGGAAATGCAGAGCATGTTCGTCCTCAAGGAAATAAAACCGTTCGTCTCGTTCCCGGTAAAGCAGCCCGCATAG

Upstream 100 bases:

>100_bases
AAATATTACGTGTTTCCACGCGGAAAGAATCATCTGTTCTTACTAGCTGGATGGCTAAAACCGGTATAAATTTCCTGCAA
CATGAGGAGTAACGGTATTT

Downstream 100 bases:

>100_bases
CATAAATGCGTGCATCGGCATCAATGACTGCACGCCCATCATTTCAAATAAAGGAATAGCCATGCCCACGACCGAGCCAG
CCACCGTGACCTTCACCAGC

Product: regulatory proteins, AsnC/Lrp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTQPTLSPIDVRILTALQQDGRITNQTLADQIGMSASPCWRRVRQLEEHRYIQGYRAVLDRRKIGLGVMVFIRISIDSHS
EAEARKFEKEVMQLEDVVACYSIGGDADFLLQVVAPDLDSFADFAMTVVRRLPGIKEMQSMFVLKEIKPFVSFPVKQPA

Sequences:

>Translated_159_residues
MTQPTLSPIDVRILTALQQDGRITNQTLADQIGMSASPCWRRVRQLEEHRYIQGYRAVLDRRKIGLGVMVFIRISIDSHS
EAEARKFEKEVMQLEDVVACYSIGGDADFLLQVVAPDLDSFADFAMTVVRRLPGIKEMQSMFVLKEIKPFVSFPVKQPA
>Mature_158_residues
TQPTLSPIDVRILTALQQDGRITNQTLADQIGMSASPCWRRVRQLEEHRYIQGYRAVLDRRKIGLGVMVFIRISIDSHSE
AEARKFEKEVMQLEDVVACYSIGGDADFLLQVVAPDLDSFADFAMTVVRRLPGIKEMQSMFVLKEIKPFVSFPVKQPA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=34.965034965035, Blast_Score=110, Evalue=4e-26,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=31.7880794701987, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18029; Mature: 17898

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPTLSPIDVRILTALQQDGRITNQTLADQIGMSASPCWRRVRQLEEHRYIQGYRAVLD
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRKIGLGVMVFIRISIDSHSEAEARKFEKEVMQLEDVVACYSIGGDADFLLQVVAPDLDS
HHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
FADFAMTVVRRLPGIKEMQSMFVLKEIKPFVSFPVKQPA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQPTLSPIDVRILTALQQDGRITNQTLADQIGMSASPCWRRVRQLEEHRYIQGYRAVLD
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRKIGLGVMVFIRISIDSHSEAEARKFEKEVMQLEDVVACYSIGGDADFLLQVVAPDLDS
HHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
FADFAMTVVRRLPGIKEMQSMFVLKEIKPFVSFPVKQPA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]