Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is rimI [H]
Identifier: 66044112
GI number: 66044112
Start: 977218
End: 977670
Strand: Direct
Name: rimI [H]
Synonym: Psyr_0857
Alternate gene names: 66044112
Gene position: 977218-977670 (Clockwise)
Preceding gene: 66044111
Following gene: 66044114
Centisome position: 16.04
GC content: 57.84
Gene sequence:
>453_bases ATGAGTGATGCCGTAACCTTCCGCCGCATGACCGAAGCCGACATGGACGCGGTGCTGAAAATCGAATACGCCGCATTCAG TCATCCGTGGACCCGCGGTATCTTTCTCGACGGGCTAAAGTCCTACGAGATCTGGCTGATGTTCGAGGGCGCGCAGCAGG TCGGGCACGGCGTCCTTCAGGTCATCATCGACGAAGCGCACCTGCTCAACATCACGGTCAAACCTGAAAACCAGGGGCGT GGTCTTGGCCTGTTGCTGCTCGACCACCTGATGAAACGCGCTTACCAGCTCAATGCACGGGAATGCTTTCTGGAACTGCG TGACAGCAACCGTCCAGCCTATCGTCTGTATGAAAACTACGGTTTCAACGAGATAGGCCGGCGTCGCGATTACTACCCGG CGGTCGGCGGCCGTGAAGACGCAGTGGTCATGGCCTGCACGCTTTTCGAGTAG
Upstream 100 bases:
>100_bases TGGGCGCTGCCAGGTCTTGAATTACTGATGGACGAGCCTGAGCGCAAGGCGGATGTCTGGAAAGCCATGCGTCGGCTGAT GACGCGCTGGAAATCGATCG
Downstream 100 bases:
>100_bases TACAGCACTGTCAGCGCTGGGTGTTGCCGTCCAGCGGTTCGACAATGGCCAGTTCTTCTTCGTCCAGGCCGTTGCCACCG CCAATGTCATCTTCATCGAC
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDAVTFRRMTEADMDAVLKIEYAAFSHPWTRGIFLDGLKSYEIWLMFEGAQQVGHGVLQVIIDEAHLLNITVKPENQGR GLGLLLLDHLMKRAYQLNARECFLELRDSNRPAYRLYENYGFNEIGRRRDYYPAVGGREDAVVMACTLFE
Sequences:
>Translated_150_residues MSDAVTFRRMTEADMDAVLKIEYAAFSHPWTRGIFLDGLKSYEIWLMFEGAQQVGHGVLQVIIDEAHLLNITVKPENQGR GLGLLLLDHLMKRAYQLNARECFLELRDSNRPAYRLYENYGFNEIGRRRDYYPAVGGREDAVVMACTLFE >Mature_149_residues SDAVTFRRMTEADMDAVLKIEYAAFSHPWTRGIFLDGLKSYEIWLMFEGAQQVGHGVLQVIIDEAHLLNITVKPENQGRG LGLLLLDHLMKRAYQLNARECFLELRDSNRPAYRLYENYGFNEIGRRRDYYPAVGGREDAVVMACTLFE
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=144, Percent_Identity=36.8055555555556, Blast_Score=100, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17294; Mature: 17163
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVTFRRMTEADMDAVLKIEYAAFSHPWTRGIFLDGLKSYEIWLMFEGAQQVGHGVLQ CCCCHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCEECCCCCEEEEEEEECHHHHHHHHHH VIIDEAHLLNITVKPENQGRGLGLLLLDHLMKRAYQLNARECFLELRDSNRPAYRLYENY HHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCC GFNEIGRRRDYYPAVGGREDAVVMACTLFE CCHHHCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SDAVTFRRMTEADMDAVLKIEYAAFSHPWTRGIFLDGLKSYEIWLMFEGAQQVGHGVLQ CCCHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCEECCCCCEEEEEEEECHHHHHHHHHH VIIDEAHLLNITVKPENQGRGLGLLLLDHLMKRAYQLNARECFLELRDSNRPAYRLYENY HHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCC GFNEIGRRRDYYPAVGGREDAVVMACTLFE CCHHHCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]