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The map label for this gene is yedY [H]

Identifier: 66044105

GI number: 66044105

Start: 962540

End: 963553

Strand: Direct

Name: yedY [H]

Synonym: Psyr_0850

Alternate gene names: 66044105

Gene position: 962540-963553 (Clockwise)

Preceding gene: 66044104

Following gene: 66044106

Centisome position: 15.8

GC content: 57.1

Gene sequence:

>1014_bases
ATGTTAATCAAACTTCCTTCTGCGTCCGACTCCAAAGAGTCGGACGTCACGCCTGAATCCATTTATCTCTCGCGACGCAC
ATTGCTCGCCAGCTCGCTTGCAGGTCTTGCCGTCACGGCAATGCCGCGCTGGGCGGGGGCCGCAGATGCTTCGCGGTATG
CCGATGTAGAGCCAGGCAAAGCGCCAGGCTGGTTCGCGGAAAAACTACCCGCCACGAAATGGCAGGCGGTCAACGTCCAG
GACGAGGCGATCACGCCGTTCAAGGACGCAACCCATTACAACAACTTCTATGAGTTCGGTACTGACAAGGGCGATCCTGC
CAAGAACGCTGGCTCTCTGCAGACCGAGCCCTGGAGTGTCGTGATAGATGGTGAAGTCGCCAAGCCTGGCCGCTATGCGC
TCGAAGACTTCATGAAGCCTTACCAATTGGAAGAGCGGATCTACCGTTTGCGTTGCGTCGAAGCCTGGTCAATGGTCATT
CCGTGGATTGGTTTTCCGATCGCTGCGTTGCTCAAGCAGGTAGAGCCGACCTCCAAAGCCAAGTACATCCGGTTCGAAAC
GCTGGAGGACGCCAAGTCCATGCCGGGTCAGCGCTCGGACTTTGCCCTGATCGACTGGCCTTATGTAGAAGGGCTGCGTC
TGGATGAGGCGATGAATCCTCTGGCGATTCTGGCGGTGGGCATGTATGGGCGTGAGCTGCCTAACCAGAATGGCGCACCG
TTACGCCTGGTGGTGCCATGGAAGTACGGTTTCAAGAGTGTGAAGTCCATCGTGCGTATCAGTCTGGTCAGTGAGCAGCC
GAAGACCACTTGGCAAAGCATTGCGGCAAACGAGTATGGCTTCTATGCCAACGTCAACCCGACTGTCGATCACCCGCGCT
GGACGCAAGCCCGCGAACGCCGCTTGCCGAGCGGTCTGTTCAGCCCGAATCTGCGCGACACGAAAATGTTCAATGGATAT
GAGGAAGAGGTGGGTTCCTTGTACGCCGGCATGGATTTGCGGAAGGACTATTGA

Upstream 100 bases:

>100_bases
TCAGTATCTGCTACGTCGCCGCAAGGCCTAGTCAATGATCTAATTTCCACCATACTCCGTAGTCTATTGGTGCATCAGTT
CCCTGGCCTGCGGAGTCATC

Downstream 100 bases:

>100_bases
TGCGATATCCGTTTTTGCGTCTGGCTGTATTTCTTGCCGCTTGTATTGCGCCTGTGTGGTGGTTGTACCAGGCATGGATT
TTTGCGCTCGGACCTGATCC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLIKLPSASDSKESDVTPESIYLSRRTLLASSLAGLAVTAMPRWAGAADASRYADVEPGKAPGWFAEKLPATKWQAVNVQ
DEAITPFKDATHYNNFYEFGTDKGDPAKNAGSLQTEPWSVVIDGEVAKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVI
PWIGFPIAALLKQVEPTSKAKYIRFETLEDAKSMPGQRSDFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAANEYGFYANVNPTVDHPRWTQARERRLPSGLFSPNLRDTKMFNGY
EEEVGSLYAGMDLRKDY

Sequences:

>Translated_337_residues
MLIKLPSASDSKESDVTPESIYLSRRTLLASSLAGLAVTAMPRWAGAADASRYADVEPGKAPGWFAEKLPATKWQAVNVQ
DEAITPFKDATHYNNFYEFGTDKGDPAKNAGSLQTEPWSVVIDGEVAKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVI
PWIGFPIAALLKQVEPTSKAKYIRFETLEDAKSMPGQRSDFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAANEYGFYANVNPTVDHPRWTQARERRLPSGLFSPNLRDTKMFNGY
EEEVGSLYAGMDLRKDY
>Mature_337_residues
MLIKLPSASDSKESDVTPESIYLSRRTLLASSLAGLAVTAMPRWAGAADASRYADVEPGKAPGWFAEKLPATKWQAVNVQ
DEAITPFKDATHYNNFYEFGTDKGDPAKNAGSLQTEPWSVVIDGEVAKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVI
PWIGFPIAALLKQVEPTSKAKYIRFETLEDAKSMPGQRSDFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAANEYGFYANVNPTVDHPRWTQARERRLPSGLFSPNLRDTKMFNGY
EEEVGSLYAGMDLRKDY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=332, Percent_Identity=52.710843373494, Blast_Score=333, Evalue=8e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37904; Mature: 37904

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKLPSASDSKESDVTPESIYLSRRTLLASSLAGLAVTAMPRWAGAADASRYADVEPGK
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
APGWFAEKLPATKWQAVNVQDEAITPFKDATHYNNFYEFGTDKGDPAKNAGSLQTEPWSV
CCCHHHHHCCCCCEEEECCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE
VIDGEVAKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVIPWIGFPIAALLKQVEPTSKA
EECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KYIRFETLEDAKSMPGQRSDFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
EEEEEEEHHHHHHCCCCCCCEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCCC
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAANEYGFYANVNPTVDHPRWTQARER
EEEEECCHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHH
RLPSGLFSPNLRDTKMFNGYEEEVGSLYAGMDLRKDY
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLIKLPSASDSKESDVTPESIYLSRRTLLASSLAGLAVTAMPRWAGAADASRYADVEPGK
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
APGWFAEKLPATKWQAVNVQDEAITPFKDATHYNNFYEFGTDKGDPAKNAGSLQTEPWSV
CCCHHHHHCCCCCEEEECCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE
VIDGEVAKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVIPWIGFPIAALLKQVEPTSKA
EECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KYIRFETLEDAKSMPGQRSDFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
EEEEEEEHHHHHHCCCCCCCEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCCC
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAANEYGFYANVNPTVDHPRWTQARER
EEEEECCHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHH
RLPSGLFSPNLRDTKMFNGYEEEVGSLYAGMDLRKDY
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]