Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66044071
Identifier: 66044071
GI number: 66044071
Start: 920739
End: 922994
Strand: Direct
Name: 66044071
Synonym: Psyr_0816
Alternate gene names: NA
Gene position: 920739-922994 (Clockwise)
Preceding gene: 66044068
Following gene: 66044072
Centisome position: 15.11
GC content: 60.02
Gene sequence:
>2256_bases ATGCCGAACGACGAAAAAGTAGTGCCGTTGAGCAAATCGTTCCCTTTACAGGGGGCGGGTACTCCTTTGGCCCGATTACC TGTTGTGTTGTTGCAGGTTCGCGACAAGGCTGCCCAGCAGCTCAAGGACGCATTGCAGGCGTTGTTCGATAACGCCGACG ACACGCTGTTCGAAATGGCTGACCGCGCCCGCAGCAACACTGAGCAGAACATCTTTTTTGAAGCCATGCGTGACCTGCGC CTCAAGCGCAAAAGCATAGAACGGGGTTTCCTCGACAAGTTCTACGAGTCCTTCCTGGTCCTGGGTCAGTATCAGATTCA GGAACCCGTGCTTCCGGCCGCTGTGTCTTTCGACAAGCTGTCGCTGGTGCACAACGATGATCTCGAGAAGACCGTGGCCG TGGATGCCATGGTCAGCAAGGTCATGAGCCGTGACGCCCTCGCCCTGGGCCAGCTCACTGCCCGCCTGAACGTCCTCATT CCTCAAGCCATTGCCGAAGACTCCAACCCGCTGGGGCCGGCGATGCTCTGCAGATTCTTTCTGGAGGCCGGGCGCAGCCT TGGCGTCGAGATCAAGGTCAAGCTGATCATTCTCAAGCTGTTCGAGAAGTACGTCCTGGCCAATACGGACGATCTGTACA GCGAAGCCAATCAGTTGCTGATTGCCACCGGTGTATTGCCGGACATGAAAGCGTTGCCGGCCCGGCGCTCATCCGACCGG GCAGCGCCGAGAAGTCGCGTCGCCGAGATGTCCGACCCTGTCCTGAACGAAGCCGCCGACAAGCTCGACAAGGGTGTGCA GGAGGTTTTCTCGGCCTTGCAGGAACTGCTGCTGCACGTTCGCGGCAACCTCGCGCCGCGCCATGAACCCAACGCCGAAG TGCGTCCGATTTCCAGCCGGGACCTGCTGCGCCTGCTGTCTCACCTGCAGCAATATGTGCCGTCGCAGGACACTTCAGAC GACTTTGACCTGCGCAATCAGCTGGAACAGCTGCTGACGCGAGTCAACGTCAAAACCGGAAAATCCAGAATCGTCGGGGT CGGTGATGAGGATGTCATCAACCTGATCGCCATGCTGTTCGAGTTCATTCTCGATGACCGCAACCTGACGCCGTCATTGC GTGCTCTGATCGGGCGCCTGCAGATTCCGATGCTCAAAGTGGCGGTCATCGACAAAAGCTTCTTCAGCCGCGGCAGTCAT CCTGCCCGCCGCCTGCTCAACGAAATTGCCACTGCCGCGCTGGGCTGGGGTGGTCGTGACGACTATCAGCGCGACTCGCT GTATCAGCGCGTCGAGCAGATCGTGCAGCGCCTGCTCAATGACTTTGTCGATGACCCGGCAATCTTCTCCGAATTGCTGG CGGATTTTCTGGCCTTCACCAGTGACGAACGTCGCCGCAGCGAGTTGCTTGAGCAGCGCACCCGCGATGCCGAAGAAGGC CGCGCGCGTGCCGAACTGGCCCGGCAGCAGGTACAACACGAACTGAATCAGCGCCTGCTGGGCAAAACCTTGCCTGAGGT TGTTGTGCGGCTGTTGCAGGAGGCCTGGAGCAAGGTCCTGCTGCTGACCTGCCTCAAGCATGGCGAGGAGTCCAGCGAGT GGCAGGCCGGGCTGGAGACCATGGACGAGTTGATCTGGAGCGTCGAGCTGCATGATGACCCGCACGCCCTGCAGCGCCTG CTGGATCTGGTGCCGGGACTGCTCAAGTCGCTGCGTGACGGTTTGACCAGTGCCGCGTTCGACCCGTTTGCCACCAGCGA TTTTTTCAGCCAGCTGGAGTCGCTGCACGTCCAGGCGTTCCAGCACTTCTCGCGCTTGCAGGAAGGCGAGGGTGGCACCG CGCAAGGCGATACTGCGCAGGCAGACGGCCAGGCCGTCGAAGGCCCGCCGATGATGGCGGTGGTTGAAGAAATCGTCCTC ATCACCCCTGAAGAGCAGATGCTCAATGAGCCGGTGGTCCAGTTACCTGACGATGACGCAGGCCTGCAGATGGTCGACAA GCTGCGGGTCGGTTGCTGGGTCGAGATTCAGGAAGATGAAGAGCACAAGCTGCGTTGTAAATTGACCGCGATTGTCGAGC CGACCGGGCGTTATGTGTTCGTCAATCGTACCGGCATGAAGGTTCTGGAAAAGACCCGCACCGGCCTTGCCGTCGAATTT CGTCGCGGCGCGGTACGTATTCTCGACGACGCGCTGCTCTTCGACCGGGCCCTGGAGTCTGTCATCAGCAATCTGCGCAA GCTCAAGGGCGCCTGA
Upstream 100 bases:
>100_bases GGGTTTGACGTTGTGCAAGGTCAAGGGGGTCGCTTCACAGTGCGAGGGTAGCAAGCCACGTTTGTGATGGGGTTCAGGTT GTTTCCTGTCAGGGGGTGTA
Downstream 100 bases:
>100_bases TCGGCGGCTGTGCCTGTCGCCAGGCACCTGTTTGACTAAGGTGCCGACGCCCCGCGTCGGCTTGCAGTCCACGCCGCTGA GCCAAGGTTCCTTGCTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 751; Mature: 750
Protein sequence:
>751_residues MPNDEKVVPLSKSFPLQGAGTPLARLPVVLLQVRDKAAQQLKDALQALFDNADDTLFEMADRARSNTEQNIFFEAMRDLR LKRKSIERGFLDKFYESFLVLGQYQIQEPVLPAAVSFDKLSLVHNDDLEKTVAVDAMVSKVMSRDALALGQLTARLNVLI PQAIAEDSNPLGPAMLCRFFLEAGRSLGVEIKVKLIILKLFEKYVLANTDDLYSEANQLLIATGVLPDMKALPARRSSDR AAPRSRVAEMSDPVLNEAADKLDKGVQEVFSALQELLLHVRGNLAPRHEPNAEVRPISSRDLLRLLSHLQQYVPSQDTSD DFDLRNQLEQLLTRVNVKTGKSRIVGVGDEDVINLIAMLFEFILDDRNLTPSLRALIGRLQIPMLKVAVIDKSFFSRGSH PARRLLNEIATAALGWGGRDDYQRDSLYQRVEQIVQRLLNDFVDDPAIFSELLADFLAFTSDERRRSELLEQRTRDAEEG RARAELARQQVQHELNQRLLGKTLPEVVVRLLQEAWSKVLLLTCLKHGEESSEWQAGLETMDELIWSVELHDDPHALQRL LDLVPGLLKSLRDGLTSAAFDPFATSDFFSQLESLHVQAFQHFSRLQEGEGGTAQGDTAQADGQAVEGPPMMAVVEEIVL ITPEEQMLNEPVVQLPDDDAGLQMVDKLRVGCWVEIQEDEEHKLRCKLTAIVEPTGRYVFVNRTGMKVLEKTRTGLAVEF RRGAVRILDDALLFDRALESVISNLRKLKGA
Sequences:
>Translated_751_residues MPNDEKVVPLSKSFPLQGAGTPLARLPVVLLQVRDKAAQQLKDALQALFDNADDTLFEMADRARSNTEQNIFFEAMRDLR LKRKSIERGFLDKFYESFLVLGQYQIQEPVLPAAVSFDKLSLVHNDDLEKTVAVDAMVSKVMSRDALALGQLTARLNVLI PQAIAEDSNPLGPAMLCRFFLEAGRSLGVEIKVKLIILKLFEKYVLANTDDLYSEANQLLIATGVLPDMKALPARRSSDR AAPRSRVAEMSDPVLNEAADKLDKGVQEVFSALQELLLHVRGNLAPRHEPNAEVRPISSRDLLRLLSHLQQYVPSQDTSD DFDLRNQLEQLLTRVNVKTGKSRIVGVGDEDVINLIAMLFEFILDDRNLTPSLRALIGRLQIPMLKVAVIDKSFFSRGSH PARRLLNEIATAALGWGGRDDYQRDSLYQRVEQIVQRLLNDFVDDPAIFSELLADFLAFTSDERRRSELLEQRTRDAEEG RARAELARQQVQHELNQRLLGKTLPEVVVRLLQEAWSKVLLLTCLKHGEESSEWQAGLETMDELIWSVELHDDPHALQRL LDLVPGLLKSLRDGLTSAAFDPFATSDFFSQLESLHVQAFQHFSRLQEGEGGTAQGDTAQADGQAVEGPPMMAVVEEIVL ITPEEQMLNEPVVQLPDDDAGLQMVDKLRVGCWVEIQEDEEHKLRCKLTAIVEPTGRYVFVNRTGMKVLEKTRTGLAVEF RRGAVRILDDALLFDRALESVISNLRKLKGA >Mature_750_residues PNDEKVVPLSKSFPLQGAGTPLARLPVVLLQVRDKAAQQLKDALQALFDNADDTLFEMADRARSNTEQNIFFEAMRDLRL KRKSIERGFLDKFYESFLVLGQYQIQEPVLPAAVSFDKLSLVHNDDLEKTVAVDAMVSKVMSRDALALGQLTARLNVLIP QAIAEDSNPLGPAMLCRFFLEAGRSLGVEIKVKLIILKLFEKYVLANTDDLYSEANQLLIATGVLPDMKALPARRSSDRA APRSRVAEMSDPVLNEAADKLDKGVQEVFSALQELLLHVRGNLAPRHEPNAEVRPISSRDLLRLLSHLQQYVPSQDTSDD FDLRNQLEQLLTRVNVKTGKSRIVGVGDEDVINLIAMLFEFILDDRNLTPSLRALIGRLQIPMLKVAVIDKSFFSRGSHP ARRLLNEIATAALGWGGRDDYQRDSLYQRVEQIVQRLLNDFVDDPAIFSELLADFLAFTSDERRRSELLEQRTRDAEEGR ARAELARQQVQHELNQRLLGKTLPEVVVRLLQEAWSKVLLLTCLKHGEESSEWQAGLETMDELIWSVELHDDPHALQRLL DLVPGLLKSLRDGLTSAAFDPFATSDFFSQLESLHVQAFQHFSRLQEGEGGTAQGDTAQADGQAVEGPPMMAVVEEIVLI TPEEQMLNEPVVQLPDDDAGLQMVDKLRVGCWVEIQEDEEHKLRCKLTAIVEPTGRYVFVNRTGMKVLEKTRTGLAVEFR RGAVRILDDALLFDRALESVISNLRKLKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84281; Mature: 84149
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDEKVVPLSKSFPLQGAGTPLARLPVVLLQVRDKAAQQLKDALQALFDNADDTLFEMA CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DRARSNTEQNIFFEAMRDLRLKRKSIERGFLDKFYESFLVLGQYQIQEPVLPAAVSFDKL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHH SLVHNDDLEKTVAVDAMVSKVMSRDALALGQLTARLNVLIPQAIAEDSNPLGPAMLCRFF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LEAGRSLGVEIKVKLIILKLFEKYVLANTDDLYSEANQLLIATGVLPDMKALPARRSSDR HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCHHHCCCCCCCCC AAPRSRVAEMSDPVLNEAADKLDKGVQEVFSALQELLLHVRGNLAPRHEPNAEVRPISSR CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH DLLRLLSHLQQYVPSQDTSDDFDLRNQLEQLLTRVNVKTGKSRIVGVGDEDVINLIAMLF HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH EFILDDRNLTPSLRALIGRLQIPMLKVAVIDKSFFSRGSHPARRLLNEIATAALGWGGRD HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC DYQRDSLYQRVEQIVQRLLNDFVDDPAIFSELLADFLAFTSDERRRSELLEQRTRDAEEG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH RARAELARQQVQHELNQRLLGKTLPEVVVRLLQEAWSKVLLLTCLKHGEESSEWQAGLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MDELIWSVELHDDPHALQRLLDLVPGLLKSLRDGLTSAAFDPFATSDFFSQLESLHVQAF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH QHFSRLQEGEGGTAQGDTAQADGQAVEGPPMMAVVEEIVLITPEEQMLNEPVVQLPDDDA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCH GLQMVDKLRVGCWVEIQEDEEHKLRCKLTAIVEPTGRYVFVNRTGMKVLEKTRTGLAVEF HHHHHHHHHCCEEEEECCCCCCHHEEEEEEEECCCCCEEEEECCHHHHHHHHHCCCEEHH RRGAVRILDDALLFDRALESVISNLRKLKGA HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PNDEKVVPLSKSFPLQGAGTPLARLPVVLLQVRDKAAQQLKDALQALFDNADDTLFEMA CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DRARSNTEQNIFFEAMRDLRLKRKSIERGFLDKFYESFLVLGQYQIQEPVLPAAVSFDKL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHH SLVHNDDLEKTVAVDAMVSKVMSRDALALGQLTARLNVLIPQAIAEDSNPLGPAMLCRFF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LEAGRSLGVEIKVKLIILKLFEKYVLANTDDLYSEANQLLIATGVLPDMKALPARRSSDR HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCHHHCCCCCCCCC AAPRSRVAEMSDPVLNEAADKLDKGVQEVFSALQELLLHVRGNLAPRHEPNAEVRPISSR CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH DLLRLLSHLQQYVPSQDTSDDFDLRNQLEQLLTRVNVKTGKSRIVGVGDEDVINLIAMLF HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH EFILDDRNLTPSLRALIGRLQIPMLKVAVIDKSFFSRGSHPARRLLNEIATAALGWGGRD HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC DYQRDSLYQRVEQIVQRLLNDFVDDPAIFSELLADFLAFTSDERRRSELLEQRTRDAEEG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH RARAELARQQVQHELNQRLLGKTLPEVVVRLLQEAWSKVLLLTCLKHGEESSEWQAGLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MDELIWSVELHDDPHALQRLLDLVPGLLKSLRDGLTSAAFDPFATSDFFSQLESLHVQAF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH QHFSRLQEGEGGTAQGDTAQADGQAVEGPPMMAVVEEIVLITPEEQMLNEPVVQLPDDDA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCH GLQMVDKLRVGCWVEIQEDEEHKLRCKLTAIVEPTGRYVFVNRTGMKVLEKTRTGLAVEF HHHHHHHHHCCEEEEECCCCCCHHEEEEEEEECCCCCEEEEECCHHHHHHHHHCCCEEHH RRGAVRILDDALLFDRALESVISNLRKLKGA HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA