Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is terC [H]
Identifier: 66044066
GI number: 66044066
Start: 915949
End: 916983
Strand: Direct
Name: terC [H]
Synonym: Psyr_0811
Alternate gene names: 66044066
Gene position: 915949-916983 (Clockwise)
Preceding gene: 66044065
Following gene: 66044067
Centisome position: 15.03
GC content: 56.71
Gene sequence:
>1035_bases ATGGAAAGCACCTCTCTAGGCTTCCCTCCACTCACGATGGCGGTTTTCGTCGGTCTGGCCGTTACGGCCATGGCTATCGA CATGTTTTCCCACCGGGGAAACAAGCCAATCACCCTCGCGCAAGCCTCGGCGTGGTCGATTTTCTGGGTCGCCATTTCGC TGGCGTTTGCCGGTTTCCTGTATGTCCAGCACGGCTCTGAAGTCGCCACGCTGTTCGTCACCGGTTATGCGCTGGAAAAA GTGTTGAGCGTCGACAACCTGTTCGTGTTCATGGCCTTGTTCTCCTGGTTCAAGATTCCGGATGGCCTGCGCCACCGCGT TCTGTACTGGGGTATTATCGGCGCCATCGTCTTCCGCGGCATTTTCGTCGCCATTGGTACCGGCCTTCTGGCGCTGGGTC CATGGGTCGAAGTAGTATTTGCGGTCATCGTTGCCTGGACAGCCATCATGATGCTCAGAGCAGGCGATGACGACGACGAA GAAGTCGACTACTCGCAACACATGGCTTATCGCTTCGCCAAGAAGCTGTTCCCGGTGTGGCCAAAACTGCACGGCAGCAA CTTCTTCGTCAGTCGCTCGGTGCTGGAGCAGGAAGTCAAAAAGCCTGAAAACGCCGGTATCACGCTGGCGGCCAAAGGCG CTCTGTTCGCGACCCCGCTGTTCCTGTGTCTGGTTGTGGCGGAAATCTCCGACGTGCTGTTCGCGTTCGACTCCGTGCCT GCAATCATCGCCGTGAGCCGCGAGCCGCTGATTGTGTTCTCGGCCATGCTCTTCGCGATCCTCGGTCTGCGTACCCTGTA CTTCGTTCTGGAAGCCCTCAAGCGTTACCTGGTGCACCTGGAGAAAGCGGTTATCGCCTTGCTGTTCTTCATTGCCTTGA AATTGGGCCTGAATGCTACCAACCACCTGTTCCATCACGGTTACGAAATCAGCGCCAATGCCAGCCTGCTGGTTGTGGTC GTCGTGTTGATTATCGGTATCGTTGCAAGCCTGCTCTTCCCGGGCAAAGACGAATCCGCGGAAGAAAAAGCGTAA
Upstream 100 bases:
>100_bases ACGAGAAAGAGCGGGAAGTCTGCCGCACGATCTGTCGAGAGCTTGGCCTCAACCCGTCCGATTTCGACCTGTAATTTTTT ACCCTAAGGAACGCAGTTAA
Downstream 100 bases:
>100_bases ACACTGGATAAAGGAGATAAACGAATCATGGCTTTGACTCTGCAAAAAGGTGGCAACCTTTCGCTGTCGAAAACCGACCC GACCCTGACCAACGTATTGA
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MESTSLGFPPLTMAVFVGLAVTAMAIDMFSHRGNKPITLAQASAWSIFWVAISLAFAGFLYVQHGSEVATLFVTGYALEK VLSVDNLFVFMALFSWFKIPDGLRHRVLYWGIIGAIVFRGIFVAIGTGLLALGPWVEVVFAVIVAWTAIMMLRAGDDDDE EVDYSQHMAYRFAKKLFPVWPKLHGSNFFVSRSVLEQEVKKPENAGITLAAKGALFATPLFLCLVVAEISDVLFAFDSVP AIIAVSREPLIVFSAMLFAILGLRTLYFVLEALKRYLVHLEKAVIALLFFIALKLGLNATNHLFHHGYEISANASLLVVV VVLIIGIVASLLFPGKDESAEEKA
Sequences:
>Translated_344_residues MESTSLGFPPLTMAVFVGLAVTAMAIDMFSHRGNKPITLAQASAWSIFWVAISLAFAGFLYVQHGSEVATLFVTGYALEK VLSVDNLFVFMALFSWFKIPDGLRHRVLYWGIIGAIVFRGIFVAIGTGLLALGPWVEVVFAVIVAWTAIMMLRAGDDDDE EVDYSQHMAYRFAKKLFPVWPKLHGSNFFVSRSVLEQEVKKPENAGITLAAKGALFATPLFLCLVVAEISDVLFAFDSVP AIIAVSREPLIVFSAMLFAILGLRTLYFVLEALKRYLVHLEKAVIALLFFIALKLGLNATNHLFHHGYEISANASLLVVV VVLIIGIVASLLFPGKDESAEEKA >Mature_344_residues MESTSLGFPPLTMAVFVGLAVTAMAIDMFSHRGNKPITLAQASAWSIFWVAISLAFAGFLYVQHGSEVATLFVTGYALEK VLSVDNLFVFMALFSWFKIPDGLRHRVLYWGIIGAIVFRGIFVAIGTGLLALGPWVEVVFAVIVAWTAIMMLRAGDDDDE EVDYSQHMAYRFAKKLFPVWPKLHGSNFFVSRSVLEQEVKKPENAGITLAAKGALFATPLFLCLVVAEISDVLFAFDSVP AIIAVSREPLIVFSAMLFAILGLRTLYFVLEALKRYLVHLEKAVIALLFFIALKLGLNATNHLFHHGYEISANASLLVVV VVLIIGIVASLLFPGKDESAEEKA
Specific function: Could conceivably alter the intracellular level of tellurium in a manner leading to resistance. Alternatively its presence in the membrane may provide a barrier to entry of the tellurium ions [H]
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=296, Percent_Identity=35.472972972973, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 37749; Mature: 37749
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTSLGFPPLTMAVFVGLAVTAMAIDMFSHRGNKPITLAQASAWSIFWVAISLAFAGFL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH YVQHGSEVATLFVTGYALEKVLSVDNLFVFMALFSWFKIPDGLRHRVLYWGIIGAIVFRG HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IFVAIGTGLLALGPWVEVVFAVIVAWTAIMMLRAGDDDDEEVDYSQHMAYRFAKKLFPVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCC PKLHGSNFFVSRSVLEQEVKKPENAGITLAAKGALFATPLFLCLVVAEISDVLFAFDSVP CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC AIIAVSREPLIVFSAMLFAILGLRTLYFVLEALKRYLVHLEKAVIALLFFIALKLGLNAT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NHLFHHGYEISANASLLVVVVVLIIGIVASLLFPGKDESAEEKA HHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MESTSLGFPPLTMAVFVGLAVTAMAIDMFSHRGNKPITLAQASAWSIFWVAISLAFAGFL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH YVQHGSEVATLFVTGYALEKVLSVDNLFVFMALFSWFKIPDGLRHRVLYWGIIGAIVFRG HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IFVAIGTGLLALGPWVEVVFAVIVAWTAIMMLRAGDDDDEEVDYSQHMAYRFAKKLFPVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCC PKLHGSNFFVSRSVLEQEVKKPENAGITLAAKGALFATPLFLCLVVAEISDVLFAFDSVP CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC AIIAVSREPLIVFSAMLFAILGLRTLYFVLEALKRYLVHLEKAVIALLFFIALKLGLNAT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NHLFHHGYEISANASLLVVVVVLIIGIVASLLFPGKDESAEEKA HHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]