Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66044061
Identifier: 66044061
GI number: 66044061
Start: 911918
End: 912868
Strand: Direct
Name: 66044061
Synonym: Psyr_0806
Alternate gene names: NA
Gene position: 911918-912868 (Clockwise)
Preceding gene: 66044060
Following gene: 66044062
Centisome position: 14.96
GC content: 59.1
Gene sequence:
>951_bases ATGGCCTTATTCTCGCCTTATGCGCTGGGGGCAACGCTGTACATGCCCGCGACCCGGGACGATATCGTCGATGTGGTGTT CGGTGAAAAGATTCCCGAGCTGCGTTCGCTGGTCGTCTGTCTGGAAGACGCCGTGGCACTGACCGATGTCGACACGGCAC TGATCAATCTTCGTCAGGTACTCACCCGTATCCGCGATCATGGCGGTCGTCCGGCCAACGGTCCGCTGCTGTTCGTGCGT CCGAGAGACGCGGCGATGGCGCGCATTCTCAACGACTGGCCGCTGATGGCGCACGTCGACGGTTTCGTTGTTCCCAAGCT CTCGCTGAAAAGTCTGACGAGCTGGGAGCAGGCCGTCACCAACCCGGCGCTGGCATTGATGCCTACACTGGAAACTCCGG AGGTGTTCAATCCGGCAGCAATGGTCGAGCTGGGGGAAGCCTTGAAGGCCAGCCTGTACGAGCGGATCATTGCGCTGCGC ATCGGAGGCAATGACCTGATGGGCTGTCTGGGGCTGCGCCGCAATCCGGCCATGACCCTGTATTCGACGCCAATGGGGTA TGTCATCCCCATGCTGGCGGGCGTCATGGGTGCGCAGGGCTTTGCGCTCACCGCACCGGTCTTCGAGCAACTGGCCACTC CGGACATTCTGCAGCATGAGCTGGCGCTGGATATTACCAATGGGTTGGTCGGTAAAACGGCAATTCACCCCTCGCAGGTC AATATCATTCAGAATGCGCTACGCGTCAGTCTGGAGGACATGAACTCCGCCCGGATGATTTTGAACTCTGTGGCGCCCGC AGTGTTCAAGTACAACGATGCGATGTGTGAACCGGCTACCCACTATAAATGGGCAACCCACATCATGGAGCGCGCCAAAT GGCATGGAGTGTTATCCGCACCCGCTTCGATCATGGATGCCAGCATTCGACTCGCTGAGGCAGTTAGCTAG
Upstream 100 bases:
>100_bases TGCTGTTGCACCTGACCGAAAAAGCGGGGATTCCCGTCGAAGAAGTGGGCGATCTCCTGGGGCCCTATCGGGCCGTGACC ATCATTCGGAGTCTGAGCTA
Downstream 100 bases:
>100_bases ATGATAGAACCTGACCTTCAAAACGCAGGACCCGATCTTGAGCCTGTAGGGCCCGACCTTGAAATCGAAGTGGAACAGCG CCTGCTGGCGGTCTTCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQVLTRIRDHGGRPANGPLLFVR PRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVTNPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALR IGGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSAPASIMDASIRLAEAVS
Sequences:
>Translated_316_residues MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQVLTRIRDHGGRPANGPLLFVR PRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVTNPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALR IGGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSAPASIMDASIRLAEAVS >Mature_315_residues ALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQVLTRIRDHGGRPANGPLLFVRP RDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVTNPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALRI GGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQVN IIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSAPASIMDASIRLAEAVS
Specific function: Unknown
COG id: COG2301
COG function: function code G; Citrate lyase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34338; Mature: 34206
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQV CCCCCCHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTRIRDHGGRPANGPLLFVRPRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVT HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHHHHC NPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALRIGGNDLMGCLGLRRNPAMTL CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCCEEE YSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV ECCCHHHHHHHHHHHHCCCCCEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHH NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHC PASIMDASIRLAEAVS CHHHHHHHHHHHHHCC >Mature Secondary Structure ALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQV CCCCCHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTRIRDHGGRPANGPLLFVRPRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVT HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHHHHC NPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALRIGGNDLMGCLGLRRNPAMTL CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCCEEE YSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV ECCCHHHHHHHHHHHHCCCCCEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHH NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHC PASIMDASIRLAEAVS CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA