Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66044061

Identifier: 66044061

GI number: 66044061

Start: 911918

End: 912868

Strand: Direct

Name: 66044061

Synonym: Psyr_0806

Alternate gene names: NA

Gene position: 911918-912868 (Clockwise)

Preceding gene: 66044060

Following gene: 66044062

Centisome position: 14.96

GC content: 59.1

Gene sequence:

>951_bases
ATGGCCTTATTCTCGCCTTATGCGCTGGGGGCAACGCTGTACATGCCCGCGACCCGGGACGATATCGTCGATGTGGTGTT
CGGTGAAAAGATTCCCGAGCTGCGTTCGCTGGTCGTCTGTCTGGAAGACGCCGTGGCACTGACCGATGTCGACACGGCAC
TGATCAATCTTCGTCAGGTACTCACCCGTATCCGCGATCATGGCGGTCGTCCGGCCAACGGTCCGCTGCTGTTCGTGCGT
CCGAGAGACGCGGCGATGGCGCGCATTCTCAACGACTGGCCGCTGATGGCGCACGTCGACGGTTTCGTTGTTCCCAAGCT
CTCGCTGAAAAGTCTGACGAGCTGGGAGCAGGCCGTCACCAACCCGGCGCTGGCATTGATGCCTACACTGGAAACTCCGG
AGGTGTTCAATCCGGCAGCAATGGTCGAGCTGGGGGAAGCCTTGAAGGCCAGCCTGTACGAGCGGATCATTGCGCTGCGC
ATCGGAGGCAATGACCTGATGGGCTGTCTGGGGCTGCGCCGCAATCCGGCCATGACCCTGTATTCGACGCCAATGGGGTA
TGTCATCCCCATGCTGGCGGGCGTCATGGGTGCGCAGGGCTTTGCGCTCACCGCACCGGTCTTCGAGCAACTGGCCACTC
CGGACATTCTGCAGCATGAGCTGGCGCTGGATATTACCAATGGGTTGGTCGGTAAAACGGCAATTCACCCCTCGCAGGTC
AATATCATTCAGAATGCGCTACGCGTCAGTCTGGAGGACATGAACTCCGCCCGGATGATTTTGAACTCTGTGGCGCCCGC
AGTGTTCAAGTACAACGATGCGATGTGTGAACCGGCTACCCACTATAAATGGGCAACCCACATCATGGAGCGCGCCAAAT
GGCATGGAGTGTTATCCGCACCCGCTTCGATCATGGATGCCAGCATTCGACTCGCTGAGGCAGTTAGCTAG

Upstream 100 bases:

>100_bases
TGCTGTTGCACCTGACCGAAAAAGCGGGGATTCCCGTCGAAGAAGTGGGCGATCTCCTGGGGCCCTATCGGGCCGTGACC
ATCATTCGGAGTCTGAGCTA

Downstream 100 bases:

>100_bases
ATGATAGAACCTGACCTTCAAAACGCAGGACCCGATCTTGAGCCTGTAGGGCCCGACCTTGAAATCGAAGTGGAACAGCG
CCTGCTGGCGGTCTTCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQVLTRIRDHGGRPANGPLLFVR
PRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVTNPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALR
IGGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV
NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSAPASIMDASIRLAEAVS

Sequences:

>Translated_316_residues
MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQVLTRIRDHGGRPANGPLLFVR
PRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVTNPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALR
IGGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV
NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSAPASIMDASIRLAEAVS
>Mature_315_residues
ALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQVLTRIRDHGGRPANGPLLFVRP
RDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVTNPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALRI
GGNDLMGCLGLRRNPAMTLYSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQVN
IIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSAPASIMDASIRLAEAVS

Specific function: Unknown

COG id: COG2301

COG function: function code G; Citrate lyase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34338; Mature: 34206

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQV
CCCCCCHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRIRDHGGRPANGPLLFVRPRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVT
HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHHHHC
NPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALRIGGNDLMGCLGLRRNPAMTL
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCCEEE
YSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV
ECCCHHHHHHHHHHHHCCCCCEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHC
PASIMDASIRLAEAVS
CHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALFSPYALGATLYMPATRDDIVDVVFGEKIPELRSLVVCLEDAVALTDVDTALINLRQV
CCCCCHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRIRDHGGRPANGPLLFVRPRDAAMARILNDWPLMAHVDGFVVPKLSLKSLTSWEQAVT
HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHHHHC
NPALALMPTLETPEVFNPAAMVELGEALKASLYERIIALRIGGNDLMGCLGLRRNPAMTL
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCCEEE
YSTPMGYVIPMLAGVMGAQGFALTAPVFEQLATPDILQHELALDITNGLVGKTAIHPSQV
ECCCHHHHHHHHHHHHCCCCCEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
NIIQNALRVSLEDMNSARMILNSVAPAVFKYNDAMCEPATHYKWATHIMERAKWHGVLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHC
PASIMDASIRLAEAVS
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA