Click here to switch to the map view.

The map label for this gene is 66043983

Identifier: 66043983

GI number: 66043983

Start: 820668

End: 821162

Strand: Direct

Name: 66043983

Synonym: Psyr_0718

Alternate gene names: NA

Gene position: 820668-821162 (Clockwise)

Preceding gene: 66043982

Following gene: 66043984

Centisome position: 13.47

GC content: 56.77

Gene sequence:

>495_bases
ATGAACAAGATCGTGCGATTCAATTCGATACCGACCTTCCCTGCGCGACAGCGCGGCATGGTGTTGCTGGTCAGTCTGGT
GTTTCTGCTGCTGCTGACGCTGCTGGGCATTTCTTCCATGCAAAACGCCACGCTGCAGGAAAAGATGGCGGGCAGTGTCG
TGGTTCGTAATGTTTCGTTCCAGGCAGCCGAGGCACAGTTGCGTCTGGGCGAGTCCTCGATCATGGCGTCCAGGTTTTCA
ATGGCTCCCTGTACGGCTGCCTGCGCCCCGCCGTCGGATTCAACGACCGTAGTCAGGCCGGGGTTGGGCACTTCCGGAGT
GACCTGGATCGGGACTGCCAATGCGTTGTTCGGCATCCAGAATCTGGGTACAACGCCTACGCCCATAAAACGTCCTGCAA
ATTGCACGGGCTCGGTAACGATGTATCGGGTAACAGCCATCGCCATTCAAGGCACCTCACGAACAGTGCTGGAGAGTATT
TATGCCAACTGCTAA

Upstream 100 bases:

>100_bases
GCATCAGCCTGACGCTGCAGGATGGACAGAACGGCATCGTCAAGTCTCAGCAGTACAACGTTGTTGCTTATCTGCGTAAC
CGCTTTTGAACGGGCCTGGC

Downstream 100 bases:

>100_bases
GGCGCTTCGTGGTGGCTTGAAATACCTCTATGGCGCGCTGTTGGCGTTGTATCTGGCAAGCCCTGTTTATGCCTTCACGC
CAGCGCAAGTGCCCTTGTTG

Product: type IV pilus assembly protein PilX

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilX; PilX Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNKIVRFNSIPTFPARQRGMVLLVSLVFLLLLTLLGISSMQNATLQEKMAGSVVVRNVSFQAAEAQLRLGESSIMASRFS
MAPCTAACAPPSDSTTVVRPGLGTSGVTWIGTANALFGIQNLGTTPTPIKRPANCTGSVTMYRVTAIAIQGTSRTVLESI
YANC

Sequences:

>Translated_164_residues
MNKIVRFNSIPTFPARQRGMVLLVSLVFLLLLTLLGISSMQNATLQEKMAGSVVVRNVSFQAAEAQLRLGESSIMASRFS
MAPCTAACAPPSDSTTVVRPGLGTSGVTWIGTANALFGIQNLGTTPTPIKRPANCTGSVTMYRVTAIAIQGTSRTVLESI
YANC
>Mature_164_residues
MNKIVRFNSIPTFPARQRGMVLLVSLVFLLLLTLLGISSMQNATLQEKMAGSVVVRNVSFQAAEAQLRLGESSIMASRFS
MAPCTAACAPPSDSTTVVRPGLGTSGVTWIGTANALFGIQNLGTTPTPIKRPANCTGSVTMYRVTAIAIQGTSRTVLESI
YANC

Specific function: Unknown

COG id: COG4726

COG function: function code NU; Tfp pilus assembly protein PilX

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17342; Mature: 17342

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIVRFNSIPTFPARQRGMVLLVSLVFLLLLTLLGISSMQNATLQEKMAGSVVVRNVSF
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCC
QAAEAQLRLGESSIMASRFSMAPCTAACAPPSDSTTVVRPGLGTSGVTWIGTANALFGIQ
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHH
NLGTTPTPIKRPANCTGSVTMYRVTAIAIQGTSRTVLESIYANC
HCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MNKIVRFNSIPTFPARQRGMVLLVSLVFLLLLTLLGISSMQNATLQEKMAGSVVVRNVSF
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCC
QAAEAQLRLGESSIMASRFSMAPCTAACAPPSDSTTVVRPGLGTSGVTWIGTANALFGIQ
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHH
NLGTTPTPIKRPANCTGSVTMYRVTAIAIQGTSRTVLESIYANC
HCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA