Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043885
Identifier: 66043885
GI number: 66043885
Start: 706921
End: 707526
Strand: Direct
Name: 66043885
Synonym: Psyr_0618
Alternate gene names: NA
Gene position: 706921-707526 (Clockwise)
Preceding gene: 66043884
Following gene: 66043886
Centisome position: 11.6
GC content: 53.3
Gene sequence:
>606_bases GTGAAGGTATTCGTCGTTTCTCATCTGAGCCCCAGCCCCTCCAGTCATCAGTTGATCTGTCAGCTGGCGCACATTCAGCA CGAGCACAGAAAGACCGTTCCCGTGCTTGTGATTGATGACCGCTACAACCTGAGCGAACTGCCCGTCAGCGATCTACCGA CGGAACACGCCCTGTTCAGCCTGGAGGATTTTCTTCACGACAATGGTTTGAGCGGCATTGTGGCGAACAGAATTGCCCGG CACATGGATAAAGTCGAAAGCGACTGGGTGCTGATTGATTTTGGCCAGCATGACTCGGCTACCTGCATGGACTTCATCCA GAAAATTGCTCGTTACAACTATCTGAGCGCGAGGCTGCGAAAGCGAAACCTCGTGATCATGGTGCCCGCCATGCATCTGG GCATTTATTCGCGAACCCTCAATGCGTCGTTCAACAATTTGCCGGCAAGCACAACCGCCTCAGCCCGTTCCGTTCAGATC AGAAGGTTATTGATGGTCACTCGTCTTGAGCGAGTACTGATAAGTCTTCCATTGCTGGCGGGCATTCTGCGTCGAATACG GCGTGTTGCTCTGCGCGTCTTTCGGCGTGTTGCAAGATCCCATTGA
Upstream 100 bases:
>100_bases ACAGAAATAACGGGAAAATCTTCTATTTTGAAAGCCTGTGGGCTGCCGTGAGGGCGGTCTACAACTCCACACCTTTCAAG TCCTACATCCAGGGGGCGAA
Downstream 100 bases:
>100_bases CCGATCTGCCGCTAGCCGTCGGTAGCAGGCGCTTCTCATTACAAGGTTAAACATATGCCTCATCTTGTGGCCGTCGATTC CAGAAAAATCAGCGTGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKVFVVSHLSPSPSSHQLICQLAHIQHEHRKTVPVLVIDDRYNLSELPVSDLPTEHALFSLEDFLHDNGLSGIVANRIAR HMDKVESDWVLIDFGQHDSATCMDFIQKIARYNYLSARLRKRNLVIMVPAMHLGIYSRTLNASFNNLPASTTASARSVQI RRLLMVTRLERVLISLPLLAGILRRIRRVALRVFRRVARSH
Sequences:
>Translated_201_residues MKVFVVSHLSPSPSSHQLICQLAHIQHEHRKTVPVLVIDDRYNLSELPVSDLPTEHALFSLEDFLHDNGLSGIVANRIAR HMDKVESDWVLIDFGQHDSATCMDFIQKIARYNYLSARLRKRNLVIMVPAMHLGIYSRTLNASFNNLPASTTASARSVQI RRLLMVTRLERVLISLPLLAGILRRIRRVALRVFRRVARSH >Mature_201_residues MKVFVVSHLSPSPSSHQLICQLAHIQHEHRKTVPVLVIDDRYNLSELPVSDLPTEHALFSLEDFLHDNGLSGIVANRIAR HMDKVESDWVLIDFGQHDSATCMDFIQKIARYNYLSARLRKRNLVIMVPAMHLGIYSRTLNASFNNLPASTTASARSVQI RRLLMVTRLERVLISLPLLAGILRRIRRVALRVFRRVARSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22988; Mature: 22988
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFVVSHLSPSPSSHQLICQLAHIQHEHRKTVPVLVIDDRYNLSELPVSDLPTEHALFS CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHH LEDFLHDNGLSGIVANRIARHMDKVESDWVLIDFGQHDSATCMDFIQKIARYNYLSARLR HHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH KRNLVIMVPAMHLGIYSRTLNASFNNLPASTTASARSVQIRRLLMVTRLERVLISLPLLA HCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GILRRIRRVALRVFRRVARSH HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVFVVSHLSPSPSSHQLICQLAHIQHEHRKTVPVLVIDDRYNLSELPVSDLPTEHALFS CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHH LEDFLHDNGLSGIVANRIARHMDKVESDWVLIDFGQHDSATCMDFIQKIARYNYLSARLR HHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH KRNLVIMVPAMHLGIYSRTLNASFNNLPASTTASARSVQIRRLLMVTRLERVLISLPLLA HCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GILRRIRRVALRVFRRVARSH HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA