Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043856
Identifier: 66043856
GI number: 66043856
Start: 676492
End: 678987
Strand: Direct
Name: 66043856
Synonym: Psyr_0589
Alternate gene names: NA
Gene position: 676492-678987 (Clockwise)
Preceding gene: 66043855
Following gene: 66043857
Centisome position: 11.1
GC content: 63.94
Gene sequence:
>2496_bases ATGCCCGACCTGCTTGACCATTACCCGCTGTCCGAGGGTACTTACCACGAAATGCTCGACGCCGACGGAGCCGTTCGCCC GCACTGGCGTCGTCTGTACGAGCACATGCGGCGCAGCAGTGCAGCGCAACTGATCCAGCGTCAGGCCCTGCTGACCCGGC AGATTCAGGAAAACGGTGTCACCTACAACGTGTATGCCGACCCCAAGGGCGCTGATCGCCCGTGGGAGCTGGACCTGTTG CCGCACATCATTGCAGCGGATGAATGGCAGCACGTGGCGGCAGGAATTGCCCAGCGTGCGCGGCTGCTCAATGCAGTGCT CGCCGACCTTTACGGCCCGCAGACGCTGATCGCCAATGGCCTGTTGCCCGCCGAACTGGTGTTTGGCCACAACAACTTTC TCTGGCCCTGTCAGGGTGTGAAGCCTCCGGAAGGCACGTTCCTGCACATGTACGCCGTTGATCTGGCGCGTACCCCGGAC GGGCGCTGGTGGGTGACTGCCGACCGTACCCAGGCGCCTTCGGGTGCCGGTTATGCGCTGGAAAACCGCCAGAGCGTCGC GCGCGCCTTGCCGGAAACCTACCGCGACCTGCAAGTCCGGCACCTGTCGGGTTTCTTCGATGCGCTGCAGCAGACGTTGG CCCGTCAGGCGCCGACCAGCAACGAAGCCCCCCTGATCGTTCTGCTGACGCCGGGCCGTTTCAACGAAAGCTACTTCGAA CACTTGTACCTGGCGCGGCAACTGGGCTATCCGCTGGTCGAGGGGGGCGATCTGACGGTGCGCGATGCCACGGTCTACCT GAAAACCCTCAGCGGCTTGCGTCGGGTTCACGCCATCATGCGCCGTCTGGACGATGACTTCTGCGACCCTCTGGAATTGC GTACCGATTCTGCGCTGGGTGTGCCGGGGCTGCTTGAGGCGGTGCGTCAGGGCAATGTACTGGTCGCCAACGCGTTGGGC AGTGGTGTGCTGGAGTCGCCTGGGCTATTGGGCTTTTTGCCGAAAATCAGTCAATACCTGTTCGGCGAGGATCTGATCCT GCCCTCGGTGGCGACCTGGTGGTGCGGAGAGCCGCCGGTGCTGGCCCAGGCGCTGGAAAAACTGCCGGATCTGTTGATCA AACCGGCGTTCCCCTCGCAGCACTTTGCGCCGGTGTTCGGTCGTGATCTGAATGAGGAGCAGCGCCTCGCACTTGCCCAG CGCATGCAGTCGCGGCCCTATGCCTACGTCGCGCAGGAGCTGGCGCAGTTGTCCCATGCTCCGGTGCTGCAGGCCGATGG CACCGGTTTGCAGCCGCGCGCCATCGGCATGCGTGTGTATGCCGTGGCCAGCCTCGACGGCTATCGCGTGCTGCCGGGCG GCCTGACCCGAGTGGCCGCTGAAGCCGACGCCGACGTGGTTTCGATGCAGCGTGGCGGGGCGAGCAAGGACACCTGGGTG CTGGGCGAGCGCTCGCACCTCGGCGAGCCGTGGAAAGGCCAGCGTAAGCTGGGTGTCTACGACCTGATCCGTCGCGATCC TTATCTGCCGTCACGGGTGGTGGAAAACCTGTTCTGGTTCGGCCGTTACTGCGAGCGCTGTGACGACAGTGCGCGCCTGC TGCGCATCATGCTGACGCGCTACGTCGACGATGATGACCCTCTCGCGCTGCAAGCCGCCGTTGCGCTGGCCGAGAGCCTG GGCATGCTGCCCGAGGCGCAGGAGGGCGAAGAGCTTAGGGATCGCCTGCTTGTCGCGCTGATGGGCGACGAGTGGCCGTT CAGCCTTCGGGCCAATTTGCAGCGTCTGCAATGGGCCGCTTCGCAAGTGCGGGGCAAGTTATCCAAGGAAAACTGGCAGG CGCTGGTCGAGTTGCAGCGCGAAGCCTTGAGCCTGGAAAGCGAAGAGCCGGATTTCGGCGAACTGCTGGATTTTCTCAAC CGTCTGGTGATGTCGCTGGCGGCCCTGTCCGGGTTCGCCATGGACGACATGACCCGCGACGAGGGCTGGAGCTTTCTGAT GATCGGGCGACGGATCGAACGCCTGAAGTTTCTCAGCACCAGTCTCTCGGCGTTTTTGCGCGGGCTGGTGGTTTTCGAGC GGGCCGGGCTGGAGTGGTTGCTGGAGCTGGGCAACAGCAGCATCACCTATCGCTCGCGCTACATGGCGGTGCCGCATCTG ATTCCGGTGCTGGACCTGTTGCTGCTCGACGAGCAGAACCCGCATGCGGTGCTGTTTCAGCTCAAGCTGGTGCAGCGCTC GTTGCGCCGCCTGAACGACGAGTTCGATGCGCCACGCGACAGTAGCCTGGCGGTGCTGGCCCAGCGTCTTGCCGCGTTCG ACCTGGGCAGCCTGGAGAATCCCTTGTTTGGCCAGAGCAGTATCGACGCCGTGCTCGACGGGCTGGCGGACTTGCTGCAG AGCATCGGTGATTGCAGTGGACAGGCATCCGATCGCCTGGCGTTGCGCCACTTTGCCCACGTCGATGATGTCAGCCAACG CACGGTGTCTGTCTGA
Upstream 100 bases:
>100_bases GTCTGCATTAAAAAAACAGTGGCTCTGTGCGTCAGATGCACACGGACGTGACATCTGACTGCACTAATCTGAAGTCCTTA CGTTGCCTGCCGAGCCTTCC
Downstream 100 bases:
>100_bases TGAGCGCTTTCTACCAGATTTTCCATGACACGCATTACAAGTACGACAGCCCGGTCTCGCTGGCCCAGCAACTGGCGCAC CTGTGGCCGCGCAGCAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 831; Mature: 830
Protein sequence:
>831_residues MPDLLDHYPLSEGTYHEMLDADGAVRPHWRRLYEHMRRSSAAQLIQRQALLTRQIQENGVTYNVYADPKGADRPWELDLL PHIIAADEWQHVAAGIAQRARLLNAVLADLYGPQTLIANGLLPAELVFGHNNFLWPCQGVKPPEGTFLHMYAVDLARTPD GRWWVTADRTQAPSGAGYALENRQSVARALPETYRDLQVRHLSGFFDALQQTLARQAPTSNEAPLIVLLTPGRFNESYFE HLYLARQLGYPLVEGGDLTVRDATVYLKTLSGLRRVHAIMRRLDDDFCDPLELRTDSALGVPGLLEAVRQGNVLVANALG SGVLESPGLLGFLPKISQYLFGEDLILPSVATWWCGEPPVLAQALEKLPDLLIKPAFPSQHFAPVFGRDLNEEQRLALAQ RMQSRPYAYVAQELAQLSHAPVLQADGTGLQPRAIGMRVYAVASLDGYRVLPGGLTRVAAEADADVVSMQRGGASKDTWV LGERSHLGEPWKGQRKLGVYDLIRRDPYLPSRVVENLFWFGRYCERCDDSARLLRIMLTRYVDDDDPLALQAAVALAESL GMLPEAQEGEELRDRLLVALMGDEWPFSLRANLQRLQWAASQVRGKLSKENWQALVELQREALSLESEEPDFGELLDFLN RLVMSLAALSGFAMDDMTRDEGWSFLMIGRRIERLKFLSTSLSAFLRGLVVFERAGLEWLLELGNSSITYRSRYMAVPHL IPVLDLLLLDEQNPHAVLFQLKLVQRSLRRLNDEFDAPRDSSLAVLAQRLAAFDLGSLENPLFGQSSIDAVLDGLADLLQ SIGDCSGQASDRLALRHFAHVDDVSQRTVSV
Sequences:
>Translated_831_residues MPDLLDHYPLSEGTYHEMLDADGAVRPHWRRLYEHMRRSSAAQLIQRQALLTRQIQENGVTYNVYADPKGADRPWELDLL PHIIAADEWQHVAAGIAQRARLLNAVLADLYGPQTLIANGLLPAELVFGHNNFLWPCQGVKPPEGTFLHMYAVDLARTPD GRWWVTADRTQAPSGAGYALENRQSVARALPETYRDLQVRHLSGFFDALQQTLARQAPTSNEAPLIVLLTPGRFNESYFE HLYLARQLGYPLVEGGDLTVRDATVYLKTLSGLRRVHAIMRRLDDDFCDPLELRTDSALGVPGLLEAVRQGNVLVANALG SGVLESPGLLGFLPKISQYLFGEDLILPSVATWWCGEPPVLAQALEKLPDLLIKPAFPSQHFAPVFGRDLNEEQRLALAQ RMQSRPYAYVAQELAQLSHAPVLQADGTGLQPRAIGMRVYAVASLDGYRVLPGGLTRVAAEADADVVSMQRGGASKDTWV LGERSHLGEPWKGQRKLGVYDLIRRDPYLPSRVVENLFWFGRYCERCDDSARLLRIMLTRYVDDDDPLALQAAVALAESL GMLPEAQEGEELRDRLLVALMGDEWPFSLRANLQRLQWAASQVRGKLSKENWQALVELQREALSLESEEPDFGELLDFLN RLVMSLAALSGFAMDDMTRDEGWSFLMIGRRIERLKFLSTSLSAFLRGLVVFERAGLEWLLELGNSSITYRSRYMAVPHL IPVLDLLLLDEQNPHAVLFQLKLVQRSLRRLNDEFDAPRDSSLAVLAQRLAAFDLGSLENPLFGQSSIDAVLDGLADLLQ SIGDCSGQASDRLALRHFAHVDDVSQRTVSV >Mature_830_residues PDLLDHYPLSEGTYHEMLDADGAVRPHWRRLYEHMRRSSAAQLIQRQALLTRQIQENGVTYNVYADPKGADRPWELDLLP HIIAADEWQHVAAGIAQRARLLNAVLADLYGPQTLIANGLLPAELVFGHNNFLWPCQGVKPPEGTFLHMYAVDLARTPDG RWWVTADRTQAPSGAGYALENRQSVARALPETYRDLQVRHLSGFFDALQQTLARQAPTSNEAPLIVLLTPGRFNESYFEH LYLARQLGYPLVEGGDLTVRDATVYLKTLSGLRRVHAIMRRLDDDFCDPLELRTDSALGVPGLLEAVRQGNVLVANALGS GVLESPGLLGFLPKISQYLFGEDLILPSVATWWCGEPPVLAQALEKLPDLLIKPAFPSQHFAPVFGRDLNEEQRLALAQR MQSRPYAYVAQELAQLSHAPVLQADGTGLQPRAIGMRVYAVASLDGYRVLPGGLTRVAAEADADVVSMQRGGASKDTWVL GERSHLGEPWKGQRKLGVYDLIRRDPYLPSRVVENLFWFGRYCERCDDSARLLRIMLTRYVDDDDPLALQAAVALAESLG MLPEAQEGEELRDRLLVALMGDEWPFSLRANLQRLQWAASQVRGKLSKENWQALVELQREALSLESEEPDFGELLDFLNR LVMSLAALSGFAMDDMTRDEGWSFLMIGRRIERLKFLSTSLSAFLRGLVVFERAGLEWLLELGNSSITYRSRYMAVPHLI PVLDLLLLDEQNPHAVLFQLKLVQRSLRRLNDEFDAPRDSSLAVLAQRLAAFDLGSLENPLFGQSSIDAVLDGLADLLQS IGDCSGQASDRLALRHFAHVDDVSQRTVSV
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 92838; Mature: 92707
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLLDHYPLSEGTYHEMLDADGAVRPHWRRLYEHMRRSSAAQLIQRQALLTRQIQENGV CCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TYNVYADPKGADRPWELDLLPHIIAADEWQHVAAGIAQRARLLNAVLADLYGPQTLIANG EEEEEECCCCCCCCEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC LLPAELVFGHNNFLWPCQGVKPPEGTFLHMYAVDLARTPDGRWWVTADRTQAPSGAGYAL CCCHHEEECCCCEEECCCCCCCCCCCEEEEEEEEHHCCCCCCEEEEECCCCCCCCCCCCH ENRQSVARALPETYRDLQVRHLSGFFDALQQTLARQAPTSNEAPLIVLLTPGRFNESYFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH HLYLARQLGYPLVEGGDLTVRDATVYLKTLSGLRRVHAIMRRLDDDFCDPLELRTDSALG HHHHHHHHCCCEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC VPGLLEAVRQGNVLVANALGSGVLESPGLLGFLPKISQYLFGEDLILPSVATWWCGEPPV CHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCHH LAQALEKLPDLLIKPAFPSQHFAPVFGRDLNEEQRLALAQRMQSRPYAYVAQELAQLSHA HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC PVLQADGTGLQPRAIGMRVYAVASLDGYRVLPGGLTRVAAEADADVVSMQRGGASKDTWV CEEECCCCCCCCHHHCEEEEEEEECCCCEECCCHHHHHHHHCCCHHHHHHCCCCCCCCEE LGERSHLGEPWKGQRKLGVYDLIRRDPYLPSRVVENLFWFGRYCERCDDSARLLRIMLTR ECCHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YVDDDDPLALQAAVALAESLGMLPEAQEGEELRDRLLVALMGDEWPFSLRANLQRLQWAA HCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SQVRGKLSKENWQALVELQREALSLESEEPDFGELLDFLNRLVMSLAALSGFAMDDMTRD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC EGWSFLMIGRRIERLKFLSTSLSAFLRGLVVFERAGLEWLLELGNSSITYRSRYMAVPHL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH IPVLDLLLLDEQNPHAVLFQLKLVQRSLRRLNDEFDAPRDSSLAVLAQRLAAFDLGSLEN HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC PLFGQSSIDAVLDGLADLLQSIGDCSGQASDRLALRHFAHVDDVSQRTVSV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDLLDHYPLSEGTYHEMLDADGAVRPHWRRLYEHMRRSSAAQLIQRQALLTRQIQENGV CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TYNVYADPKGADRPWELDLLPHIIAADEWQHVAAGIAQRARLLNAVLADLYGPQTLIANG EEEEEECCCCCCCCEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC LLPAELVFGHNNFLWPCQGVKPPEGTFLHMYAVDLARTPDGRWWVTADRTQAPSGAGYAL CCCHHEEECCCCEEECCCCCCCCCCCEEEEEEEEHHCCCCCCEEEEECCCCCCCCCCCCH ENRQSVARALPETYRDLQVRHLSGFFDALQQTLARQAPTSNEAPLIVLLTPGRFNESYFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH HLYLARQLGYPLVEGGDLTVRDATVYLKTLSGLRRVHAIMRRLDDDFCDPLELRTDSALG HHHHHHHHCCCEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC VPGLLEAVRQGNVLVANALGSGVLESPGLLGFLPKISQYLFGEDLILPSVATWWCGEPPV CHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCHH LAQALEKLPDLLIKPAFPSQHFAPVFGRDLNEEQRLALAQRMQSRPYAYVAQELAQLSHA HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC PVLQADGTGLQPRAIGMRVYAVASLDGYRVLPGGLTRVAAEADADVVSMQRGGASKDTWV CEEECCCCCCCCHHHCEEEEEEEECCCCEECCCHHHHHHHHCCCHHHHHHCCCCCCCCEE LGERSHLGEPWKGQRKLGVYDLIRRDPYLPSRVVENLFWFGRYCERCDDSARLLRIMLTR ECCHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YVDDDDPLALQAAVALAESLGMLPEAQEGEELRDRLLVALMGDEWPFSLRANLQRLQWAA HCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SQVRGKLSKENWQALVELQREALSLESEEPDFGELLDFLNRLVMSLAALSGFAMDDMTRD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC EGWSFLMIGRRIERLKFLSTSLSAFLRGLVVFERAGLEWLLELGNSSITYRSRYMAVPHL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH IPVLDLLLLDEQNPHAVLFQLKLVQRSLRRLNDEFDAPRDSSLAVLAQRLAAFDLGSLEN HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC PLFGQSSIDAVLDGLADLLQSIGDCSGQASDRLALRHFAHVDDVSQRTVSV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]