Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043780
Identifier: 66043780
GI number: 66043780
Start: 568358
End: 569113
Strand: Direct
Name: 66043780
Synonym: Psyr_0513
Alternate gene names: NA
Gene position: 568358-569113 (Clockwise)
Preceding gene: 66043778
Following gene: 66043786
Centisome position: 9.33
GC content: 58.07
Gene sequence:
>756_bases ATGTCGCAGTTGCTTCGAGCGGTGGGGGTGCTGGTCTTTCTGCTGATGGCGCACGTCAACGCAGCTGAAAAGTTGCGTCT TGTCGCCGATCCCTGGCCACCTTTTACCGACGCGCTGCTGCTCAACGGCGGGCTGGCAACCGATATCGTCAATACGGCGC TGCGCCGTGCCGGGTACACCACGCTGTATGAGCAAGTGCCCTGGGCACGGGCGATGCTGGGTTTGAGCCAAGGGCGTCAT GATGTGCTGATCAATGCGTGGTTCAGCGATGAACGTACGAAAATTGGCCAGTTTTCTGCGCAATACCTGCTCAACCGGAT ACGTTTCATCAAGCGCAAGGAGTCGCCCATTGGCACCCTGACCCATGAGCAGCTCCACCAATACGTGATCGCGGTGGTCA GGGGTTATGCTTATGCCCCTGCGTTTGACAGCGACAGCCAGTTGCAGAAGGTCCCTGTGCAGAACTTCTCCACCGCCATA CGCATGCTCGCCGCCGAGCGTGTCGACCTGACCCTGGAAGATGAGTACGTAGCCCGTTACAACCTGGCGATGGAACGGGA TGAGGTGCGTGACCGGGTCGAGTTTCTACCGGGCTCGTTGAGCGAGAACAGCCTGCATATTCTGGTCAGCCTGAAAAATC CCCACCACGACAAGATCGTCGCCGACTTTGATCGCGAAATTGCCGCTATGAAAGCCGACGGCACCTACGATGAGCTGCTC AGACTGCATGGGTTGCAGCAACCTCCGGAGCTTTGA
Upstream 100 bases:
>100_bases TGCTTGAGGTCTTCAATTAGAATGCAGGCGCCCTCACGGGCGAGCGTTTTCCTGCCGATAGGATTAAATCGGGCATGCCG CCCCTTTCAGGAACCTGAGC
Downstream 100 bases:
>100_bases TCAAGTGCGCGGCGAGGGTGCGCAGCGGAGCCAGCTGGCGGCAGATCAGCGCCAGCTGGGCTTGCACCAGTCGCTGACTT TCGTCCATGTCTTCGGGCAG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC Transporter; ABC-Type Amino Acid Transport/Signal Transduction System
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSQLLRAVGVLVFLLMAHVNAAEKLRLVADPWPPFTDALLLNGGLATDIVNTALRRAGYTTLYEQVPWARAMLGLSQGRH DVLINAWFSDERTKIGQFSAQYLLNRIRFIKRKESPIGTLTHEQLHQYVIAVVRGYAYAPAFDSDSQLQKVPVQNFSTAI RMLAAERVDLTLEDEYVARYNLAMERDEVRDRVEFLPGSLSENSLHILVSLKNPHHDKIVADFDREIAAMKADGTYDELL RLHGLQQPPEL
Sequences:
>Translated_251_residues MSQLLRAVGVLVFLLMAHVNAAEKLRLVADPWPPFTDALLLNGGLATDIVNTALRRAGYTTLYEQVPWARAMLGLSQGRH DVLINAWFSDERTKIGQFSAQYLLNRIRFIKRKESPIGTLTHEQLHQYVIAVVRGYAYAPAFDSDSQLQKVPVQNFSTAI RMLAAERVDLTLEDEYVARYNLAMERDEVRDRVEFLPGSLSENSLHILVSLKNPHHDKIVADFDREIAAMKADGTYDELL RLHGLQQPPEL >Mature_250_residues SQLLRAVGVLVFLLMAHVNAAEKLRLVADPWPPFTDALLLNGGLATDIVNTALRRAGYTTLYEQVPWARAMLGLSQGRHD VLINAWFSDERTKIGQFSAQYLLNRIRFIKRKESPIGTLTHEQLHQYVIAVVRGYAYAPAFDSDSQLQKVPVQNFSTAIR MLAAERVDLTLEDEYVARYNLAMERDEVRDRVEFLPGSLSENSLHILVSLKNPHHDKIVADFDREIAAMKADGTYDELLR LHGLQQPPEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28437; Mature: 28306
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLLRAVGVLVFLLMAHVNAAEKLRLVADPWPPFTDALLLNGGLATDIVNTALRRAGYT CHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCH TLYEQVPWARAMLGLSQGRHDVLINAWFSDERTKIGQFSAQYLLNRIRFIKRKESPIGTL HHHHHCCHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC THEQLHQYVIAVVRGYAYAPAFDSDSQLQKVPVQNFSTAIRMLAAERVDLTLEDEYVARY CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCEEECCHHHHHH NLAMERDEVRDRVEFLPGSLSENSLHILVSLKNPHHDKIVADFDREIAAMKADGTYDELL HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHH RLHGLQQPPEL HHHCCCCCCCC >Mature Secondary Structure SQLLRAVGVLVFLLMAHVNAAEKLRLVADPWPPFTDALLLNGGLATDIVNTALRRAGYT HHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCH TLYEQVPWARAMLGLSQGRHDVLINAWFSDERTKIGQFSAQYLLNRIRFIKRKESPIGTL HHHHHCCHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC THEQLHQYVIAVVRGYAYAPAFDSDSQLQKVPVQNFSTAIRMLAAERVDLTLEDEYVARY CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCEEECCHHHHHH NLAMERDEVRDRVEFLPGSLSENSLHILVSLKNPHHDKIVADFDREIAAMKADGTYDELL HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHH RLHGLQQPPEL HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA