Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is bccA [H]
Identifier: 66043767
GI number: 66043767
Start: 542495
End: 544228
Strand: Direct
Name: bccA [H]
Synonym: Psyr_0500
Alternate gene names: 66043767
Gene position: 542495-544228 (Clockwise)
Preceding gene: 66043766
Following gene: 66043770
Centisome position: 8.9
GC content: 64.88
Gene sequence:
>1734_bases ATGAAAAAGGTTCTGATAGCCAATCGTGGCGAAATTGCCGTTCGTATTGCCCGTGCCTGCCGTGACTACGGAGTCGCCTC GGTGGCGGTGTACGCCGATGCCGATATCGACGCGCTGCACGTGCGTCAGGCCGATGAGGCCTACGGACTGCAGGGCGAGC GCCCGACCGACACCTACCTGAACATCGAAAAGCTGCTGGCGGTTGCCGCGCGTGCCGGTGCCGACGCGGTTCACCCAGGC TACGGCTTCCTCTCGGAGCGCGCCGAATTCGCCCGCGCGGTGATCGACGCCGGTCTGATCTGGATCGGCCCCGATCCTGC GACCATCGACGCACTGGGCGACAAGGTCCAGGCCCGACGTATCGCCCTGAAAGTCGGCGCACCCCTGGTGGCCGGTACGG AAGACCCGGTAAACGATGCCTCTGAGGTGGTCGCATTTGCCGAGCAGCACGGCCTGCCGATTGCCATCAAGGCTGCCTTT GGCGGCGGTGGGCGCGGCCTGAAAGTCGCCTGGAAGCTCGATGAAGTCAGCGAGCTGTACGAATCTGCAGTGCGTGAGGC GTTGACCGCGTTCGGTCGTGGCGAGTGCTTCGTCGAGCGCTTCCTGGATCGCCCACGGCACATCGAAGCGCAGATCATCG CCGACCGTCATGGCCGGGTGGTTGTGGTCGGCACCCGTGACTGCTCGTTGCAGCGTCGCAACCAGAAGCTGATCGAAGAA GCGCCAGCGCCTTATCTGAATGACGAACTGCGCCAGCGCATTCACGAGTCGGCCCGCGCGGTCTGCGCCGAAGCGGGCTA TGTCGGTGCCGGTACGGTGGAGTTCCTGCTCAGCGGCGATGGCACCCTGTCGTTCCTGGAGGTCAACACGCGCTTGCAGG TCGAACACCCGGTGACGGAAGAAACCAGCGGTGTGGACCTGGTCATCGAACAACTTCGCGTCGCCGACGGCCTGCCGCTG TCGTTCGATGGCACGCCTGTGCCGCGCGGTCACAGCTTTGAATTCCGCATCAATGCCGAAGACGCGGGCAACGGCTTTCT GCCGACGCCGGGGTCTATCACTTTATTTCAGCCGCCGTCCGGTCCGGGCGTGCGTCTGGACACCGGCGTGGCAGAAGGCT CACGGGTTTCACCAAACTTCGACTCGATGATCGCCAAGCTGATCGTCACCGGCGCCACCCGCGAACAGGCCATCAGCCGC GCCCGCCGTGCGCTGGCCGAGTTCAAGGTGGAAGGCGTGGCCACCGTGCTGCCGTTCCACCGGGCGGTCATGGACCATGC CGACTTCACCGCGGCCAATACCTTCGCCGTCCACACCCGCTGGATCGAAACCGACTTCGCCGAGCACGTCACCATCGCCC CACGCAACGCAGAGCCGGTCGATCCCGGCGTGTTGCGCACCTTCGTTGAAATCGACGGCAAACGCCACGAACTGGGCCTG CCTGCTGAGCTGCTGGCCGGCATGAGCCTGAACGCTGCCGCCCCGGCTGACGCCAGCCAGCCAGTCGCCGATGCCCCGGA CCCGCACGCCGTGCTGACGCCGGTAGCGGGCAACCTGCATGCCTGGGCGGTTGAAGACGGTGCGACGGTAGAAAAGGGAC AGGTGATCGCCATCATGGAGGCGATGAAGATGGAAACATCGATACTGGCACCGTGTGCCGGAACCGTGCAGATCGGCAAG GAGCCTGGGGGGTATCTGGAGGCGAAGGTGGTGATTGGGCGGGTTGAGGCCTGA
Upstream 100 bases:
>100_bases ACAAGGCCGGGCAGATTCCGGTCAATGCCCGCATTCGCTTCAACCCGCTGAGCGCCTTCGAGCCAGTGCGCCCCGCCACT TCAGACGAGACCAAGAACAG
Downstream 100 bases:
>100_bases TTTGATCGTTAATGTGCGTCAGCCGCGTGGGGGCGGCTGACGCACACTGTCAGTCTTCTCAATCCAGCCGCAACTCAGGC GGCTCGGGCGCATCCTTGGT
Product: carbamoyl-phosphate synthase subunit L
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVRQADEAYGLQGERPTDTYLNIEKLLAVAARAGADAVHPG YGFLSERAEFARAVIDAGLIWIGPDPATIDALGDKVQARRIALKVGAPLVAGTEDPVNDASEVVAFAEQHGLPIAIKAAF GGGGRGLKVAWKLDEVSELYESAVREALTAFGRGECFVERFLDRPRHIEAQIIADRHGRVVVVGTRDCSLQRRNQKLIEE APAPYLNDELRQRIHESARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTEETSGVDLVIEQLRVADGLPL SFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSITLFQPPSGPGVRLDTGVAEGSRVSPNFDSMIAKLIVTGATREQAISR ARRALAEFKVEGVATVLPFHRAVMDHADFTAANTFAVHTRWIETDFAEHVTIAPRNAEPVDPGVLRTFVEIDGKRHELGL PAELLAGMSLNAAAPADASQPVADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIMEAMKMETSILAPCAGTVQIGK EPGGYLEAKVVIGRVEA
Sequences:
>Translated_577_residues MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVRQADEAYGLQGERPTDTYLNIEKLLAVAARAGADAVHPG YGFLSERAEFARAVIDAGLIWIGPDPATIDALGDKVQARRIALKVGAPLVAGTEDPVNDASEVVAFAEQHGLPIAIKAAF GGGGRGLKVAWKLDEVSELYESAVREALTAFGRGECFVERFLDRPRHIEAQIIADRHGRVVVVGTRDCSLQRRNQKLIEE APAPYLNDELRQRIHESARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTEETSGVDLVIEQLRVADGLPL SFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSITLFQPPSGPGVRLDTGVAEGSRVSPNFDSMIAKLIVTGATREQAISR ARRALAEFKVEGVATVLPFHRAVMDHADFTAANTFAVHTRWIETDFAEHVTIAPRNAEPVDPGVLRTFVEIDGKRHELGL PAELLAGMSLNAAAPADASQPVADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIMEAMKMETSILAPCAGTVQIGK EPGGYLEAKVVIGRVEA >Mature_577_residues MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVRQADEAYGLQGERPTDTYLNIEKLLAVAARAGADAVHPG YGFLSERAEFARAVIDAGLIWIGPDPATIDALGDKVQARRIALKVGAPLVAGTEDPVNDASEVVAFAEQHGLPIAIKAAF GGGGRGLKVAWKLDEVSELYESAVREALTAFGRGECFVERFLDRPRHIEAQIIADRHGRVVVVGTRDCSLQRRNQKLIEE APAPYLNDELRQRIHESARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTEETSGVDLVIEQLRVADGLPL SFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSITLFQPPSGPGVRLDTGVAEGSRVSPNFDSMIAKLIVTGATREQAISR ARRALAEFKVEGVATVLPFHRAVMDHADFTAANTFAVHTRWIETDFAEHVTIAPRNAEPVDPGVLRTFVEIDGKRHELGL PAELLAGMSLNAAAPADASQPVADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIMEAMKMETSILAPCAGTVQIGK EPGGYLEAKVVIGRVEA
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=451, Percent_Identity=44.5676274944568, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI106049295, Length=451, Percent_Identity=44.5676274944568, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI106049292, Length=451, Percent_Identity=44.5676274944568, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI116805327, Length=445, Percent_Identity=43.5955056179775, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI65506442, Length=434, Percent_Identity=41.4746543778802, Blast_Score=345, Evalue=9e-95, Organism=Homo sapiens, GI189095269, Length=434, Percent_Identity=41.4746543778802, Blast_Score=345, Evalue=9e-95, Organism=Homo sapiens, GI295821183, Length=434, Percent_Identity=41.4746543778802, Blast_Score=344, Evalue=1e-94, Organism=Homo sapiens, GI38679977, Length=511, Percent_Identity=29.9412915851272, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI38679967, Length=511, Percent_Identity=29.9412915851272, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI38679960, Length=511, Percent_Identity=29.9412915851272, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI38679971, Length=511, Percent_Identity=29.9412915851272, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI38679974, Length=511, Percent_Identity=29.9412915851272, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI134142062, Length=512, Percent_Identity=30.2734375, Blast_Score=205, Evalue=8e-53, Organism=Escherichia coli, GI1789654, Length=436, Percent_Identity=45.8715596330275, Blast_Score=355, Evalue=3e-99, Organism=Caenorhabditis elegans, GI17562816, Length=450, Percent_Identity=44.8888888888889, Blast_Score=364, Evalue=1e-101, Organism=Caenorhabditis elegans, GI71987519, Length=437, Percent_Identity=43.4782608695652, Blast_Score=352, Evalue=4e-97, Organism=Caenorhabditis elegans, GI17567343, Length=450, Percent_Identity=41.3333333333333, Blast_Score=346, Evalue=2e-95, Organism=Caenorhabditis elegans, GI133931226, Length=494, Percent_Identity=29.3522267206478, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI71997168, Length=445, Percent_Identity=30.561797752809, Blast_Score=188, Evalue=8e-48, Organism=Caenorhabditis elegans, GI71997163, Length=453, Percent_Identity=30.6843267108168, Blast_Score=187, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6319695, Length=436, Percent_Identity=43.1192660550459, Blast_Score=350, Evalue=5e-97, Organism=Saccharomyces cerevisiae, GI6321376, Length=436, Percent_Identity=44.2660550458716, Blast_Score=346, Evalue=6e-96, Organism=Saccharomyces cerevisiae, GI6319685, Length=432, Percent_Identity=41.8981481481481, Blast_Score=315, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6324343, Length=531, Percent_Identity=29.0018832391714, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6323863, Length=461, Percent_Identity=29.7180043383948, Blast_Score=194, Evalue=2e-50, Organism=Drosophila melanogaster, GI281363050, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652224, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652222, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652220, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652218, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652212, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652210, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652214, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI19921944, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652216, Length=435, Percent_Identity=47.1264367816092, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24651757, Length=449, Percent_Identity=42.5389755011136, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24651759, Length=411, Percent_Identity=41.8491484184915, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24586458, Length=510, Percent_Identity=28.8235294117647, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI161076409, Length=510, Percent_Identity=28.8235294117647, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI161076407, Length=510, Percent_Identity=28.8235294117647, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24586460, Length=510, Percent_Identity=28.8235294117647, Blast_Score=189, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 61566; Mature: 61566
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVRQADEAYGLQGERPTDTYL CCCEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCHHHH NIEKLLAVAARAGADAVHPGYGFLSERAEFARAVIDAGLIWIGPDPATIDALGDKVQARR HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHCCHHHHHE IALKVGAPLVAGTEDPVNDASEVVAFAEQHGLPIAIKAAFGGGGRGLKVAWKLDEVSELY EEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEHHHHHHHH ESAVREALTAFGRGECFVERFLDRPRHIEAQIIADRHGRVVVVGTRDCSLQRRNQKLIEE HHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH APAPYLNDELRQRIHESARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTE CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCEEEEECCCCC ETSGVDLVIEQLRVADGLPLSFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSITLFQPPS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC GPGVRLDTGVAEGSRVSPNFDSMIAKLIVTGATREQAISRARRALAEFKVEGVATVLPFH CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH RAVMDHADFTAANTFAVHTRWIETDFAEHVTIAPRNAEPVDPGVLRTFVEIDGKRHELGL HHHHHCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC PAELLAGMSLNAAAPADASQPVADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIME CHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEECCCCEEEEHH AMKMETSILAPCAGTVQIGKEPGGYLEAKVVIGRVEA HHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEECC >Mature Secondary Structure MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVRQADEAYGLQGERPTDTYL CCCEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCHHHH NIEKLLAVAARAGADAVHPGYGFLSERAEFARAVIDAGLIWIGPDPATIDALGDKVQARR HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHCCHHHHHE IALKVGAPLVAGTEDPVNDASEVVAFAEQHGLPIAIKAAFGGGGRGLKVAWKLDEVSELY EEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEHHHHHHHH ESAVREALTAFGRGECFVERFLDRPRHIEAQIIADRHGRVVVVGTRDCSLQRRNQKLIEE HHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH APAPYLNDELRQRIHESARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTE CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCEEEEECCCCC ETSGVDLVIEQLRVADGLPLSFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSITLFQPPS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC GPGVRLDTGVAEGSRVSPNFDSMIAKLIVTGATREQAISRARRALAEFKVEGVATVLPFH CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH RAVMDHADFTAANTFAVHTRWIETDFAEHVTIAPRNAEPVDPGVLRTFVEIDGKRHELGL HHHHHCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC PAELLAGMSLNAAAPADASQPVADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIME CHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEECCCCEEEEHH AMKMETSILAPCAGTVQIGKEPGGYLEAKVVIGRVEA HHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7909542; 11234002 [H]