| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is aspA
Identifier: 62390385
GI number: 62390385
Start: 1585377
End: 1586957
Strand: Reverse
Name: aspA
Synonym: cg1697
Alternate gene names: 62390385
Gene position: 1586957-1585377 (Counterclockwise)
Preceding gene: 62390386
Following gene: 62390384
Centisome position: 48.34
GC content: 53.38
Gene sequence:
>1581_bases ATGTCTAAGACGAGCAACAAGTCTTCAGCAGACTCAAAGAATGACGCAAAAGCCGAAGACATTGTGAACGGCGAGAACCA AATCGCCACGAATGAGTCGCAGTCTTCAGACAGCGCTGCAGTTTCGGAACGTGTCGTCGAACCAAAAACCACGGTTCAGA AAAAGTTCCGAATCGAATCGGATCTGCTTGGTGAACTTCAGATCCCATCCCACGCATATTACGGGGTGCACACCCTTCGT GCGGTGGACAACTTCCAAATCTCACGAACCACCATCAACCACGTCCCAGATTTCATTCGCGGCATGGTCCAGGTGAAAAA GGCCGCAGCTTTAGCAAACCGCCGACTGCACACACTTCCAGCACAAAAAGCAGAAGCAATTGTCTGGGCTTGTGATCAGA TCCTCATTGAGGAACGCTGTATGGATCAGTTCCCCATCGATGTGTTCCAGGGTGGCGCAGGTACCTCACTGAACATGAAC ACCAACGAGGTTGTTGCCAACCTTGCACTTGAGTTCTTAGGCCATGAAAAGGGCGAGTACCACATCCTGCACCCCATGGA TGATGTGAACATGTCCCAGTCCACCAACGATTCCTACCCAACTGGTTTCCGCCTGGGCATTTACGCTGGACTGCAGACCC TCATCGCTGAAATTGATGAGCTTCAGGTTGCGTTCCGCCACAAGGGCAATGAGTTTGTCGACATCATCAAGATGGGCCGC ACCCAGTTGCAGGATGCTGTTCCCATGAGCTTGGGCGAAGAGTTCCGAGCATTCGCGCACAACCTCGCAGAAGAGCAGAC CGTGCTGCGTGAAGCTGCCAACCGTCTCCTCGAGGTCAATCTTGGTGCAACCGCAATCGGTACTGGTGTGAACACTCCAG CAGGCTACCGCCACCAGGTTGTCGCTGCTCTGTCTGAGGTCACCGGACTGGAACTAAAGTCCGCACGTGATCTCATCGAG GCTACCTCTGACACCGGTGCATATGTTCATGCGCACTCCGCAATCAAGCGTGCAGCCATGAAACTGTCCAAGATCTGTAA CGATCTACGTCTGCTGTCTTCTGGTCCTCGTGCTGGCTTGAACGAAATCAACCTGCCACCACGCCAGGCTGGTTCCTCCA TCATGCCAGCCAAGGTCAACCCAGTGATCCCAGAAGTGGTCAACCAGGTCTGCTTCAAGGTCTTCGGTAACGATCTCACC GTCACCATGGCTGCGGAAGCTGGCCAGTTGCAGCTCAACGTCATGGAGCCAGTCATTGGCGAATCCCTCTTCCAGTCACT GCGCATCCTGGGCAATGCAGCCAAGACTTTGCGTGAGAAGTGCGTCGTAGGAATCACCGCCAACGCTGATGTTTGCCGTG CTTACGTTGATAACTCCATCGGGATTATCACTTACCTGAACCCATTCCTGGGCCACGACATTGGAGATCAGATCGGTAAG GAAGCAGCCGAAACTGGTCGACCAGTGCGTGAACTCATCCTGGAAAAGAAGCTCATGGATGAAAAGACGCTCGAGGCAGT CCTGTCCAAGGAGAACCTCATGCACCCAATGTTCCGCGGAAGGCTCTACTTGGAGAACTAA
Upstream 100 bases:
>100_bases CCCCCGAAAATGTAGTGGGTAGTTCCACACTGCCTCTTACAAGTACGTAGGATAATCCACAGCACCATTGTGATTTCCTT CAACTTGTGAGAGGCAGTAC
Downstream 100 bases:
>100_bases TCCAAGATCTCGTCTGATACCTGGGCAATTAGGTTGAGAGTTCATCTCACCTGGTTGCCCAGGTTTTTTCGTGGGTGAAT TCAGCAGGCGCCTGTTTAAG
Product: aspartate ammonia-lyase
Products: NA
Alternate protein names: Aspartase
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MSKTSNKSSADSKNDAKAEDIVNGENQIATNESQSSDSAAVSERVVEPKTTVQKKFRIESDLLGELQIPSHAYYGVHTLR AVDNFQISRTTINHVPDFIRGMVQVKKAAALANRRLHTLPAQKAEAIVWACDQILIEERCMDQFPIDVFQGGAGTSLNMN TNEVVANLALEFLGHEKGEYHILHPMDDVNMSQSTNDSYPTGFRLGIYAGLQTLIAEIDELQVAFRHKGNEFVDIIKMGR TQLQDAVPMSLGEEFRAFAHNLAEEQTVLREAANRLLEVNLGATAIGTGVNTPAGYRHQVVAALSEVTGLELKSARDLIE ATSDTGAYVHAHSAIKRAAMKLSKICNDLRLLSSGPRAGLNEINLPPRQAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLT VTMAAEAGQLQLNVMEPVIGESLFQSLRILGNAAKTLREKCVVGITANADVCRAYVDNSIGIITYLNPFLGHDIGDQIGK EAAETGRPVRELILEKKLMDEKTLEAVLSKENLMHPMFRGRLYLEN
Sequences:
>Translated_526_residues MSKTSNKSSADSKNDAKAEDIVNGENQIATNESQSSDSAAVSERVVEPKTTVQKKFRIESDLLGELQIPSHAYYGVHTLR AVDNFQISRTTINHVPDFIRGMVQVKKAAALANRRLHTLPAQKAEAIVWACDQILIEERCMDQFPIDVFQGGAGTSLNMN TNEVVANLALEFLGHEKGEYHILHPMDDVNMSQSTNDSYPTGFRLGIYAGLQTLIAEIDELQVAFRHKGNEFVDIIKMGR TQLQDAVPMSLGEEFRAFAHNLAEEQTVLREAANRLLEVNLGATAIGTGVNTPAGYRHQVVAALSEVTGLELKSARDLIE ATSDTGAYVHAHSAIKRAAMKLSKICNDLRLLSSGPRAGLNEINLPPRQAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLT VTMAAEAGQLQLNVMEPVIGESLFQSLRILGNAAKTLREKCVVGITANADVCRAYVDNSIGIITYLNPFLGHDIGDQIGK EAAETGRPVRELILEKKLMDEKTLEAVLSKENLMHPMFRGRLYLEN >Mature_525_residues SKTSNKSSADSKNDAKAEDIVNGENQIATNESQSSDSAAVSERVVEPKTTVQKKFRIESDLLGELQIPSHAYYGVHTLRA VDNFQISRTTINHVPDFIRGMVQVKKAAALANRRLHTLPAQKAEAIVWACDQILIEERCMDQFPIDVFQGGAGTSLNMNT NEVVANLALEFLGHEKGEYHILHPMDDVNMSQSTNDSYPTGFRLGIYAGLQTLIAEIDELQVAFRHKGNEFVDIIKMGRT QLQDAVPMSLGEEFRAFAHNLAEEQTVLREAANRLLEVNLGATAIGTGVNTPAGYRHQVVAALSEVTGLELKSARDLIEA TSDTGAYVHAHSAIKRAAMKLSKICNDLRLLSSGPRAGLNEINLPPRQAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLTV TMAAEAGQLQLNVMEPVIGESLFQSLRILGNAAKTLREKCVVGITANADVCRAYVDNSIGIITYLNPFLGHDIGDQIGKE AAETGRPVRELILEKKLMDEKTLEAVLSKENLMHPMFRGRLYLEN
Specific function: Unknown
COG id: COG1027
COG function: function code E; Aspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II fumarase/aspartase family. Aspartase subfamily
Homologues:
Organism=Homo sapiens, GI19743875, Length=465, Percent_Identity=37.8494623655914, Blast_Score=318, Evalue=7e-87, Organism=Escherichia coli, GI87082375, Length=468, Percent_Identity=64.3162393162393, Blast_Score=613, Evalue=1e-177, Organism=Escherichia coli, GI1787896, Length=470, Percent_Identity=36.3829787234043, Blast_Score=300, Evalue=1e-82, Organism=Caenorhabditis elegans, GI17553882, Length=470, Percent_Identity=38.0851063829787, Blast_Score=323, Evalue=1e-88, Organism=Caenorhabditis elegans, GI32565146, Length=327, Percent_Identity=37.3088685015291, Blast_Score=233, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6324993, Length=462, Percent_Identity=36.5800865800866, Blast_Score=308, Evalue=1e-84, Organism=Drosophila melanogaster, GI24640179, Length=464, Percent_Identity=37.9310344827586, Blast_Score=328, Evalue=7e-90, Organism=Drosophila melanogaster, GI24640177, Length=464, Percent_Identity=37.9310344827586, Blast_Score=328, Evalue=8e-90, Organism=Drosophila melanogaster, GI78710009, Length=461, Percent_Identity=37.7440347071584, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24662684, Length=470, Percent_Identity=35.7446808510638, Blast_Score=300, Evalue=1e-81, Organism=Drosophila melanogaster, GI24583245, Length=456, Percent_Identity=34.8684210526316, Blast_Score=280, Evalue=2e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ASPA_CORGL (Q59200)
Other databases:
- EMBL: D25316 - EMBL: BA000036 - EMBL: BX927152 - PIR: JC4101 - RefSeq: NP_600719.1 - RefSeq: YP_225787.1 - ProteinModelPortal: Q59200 - SMR: Q59200 - GeneID: 1019476 - GeneID: 3343809 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg1697 - KEGG: cgl:NCgl1446 - HOGENOM: HBG284369 - OMA: VGKICAQ - PhylomeDB: Q59200 - ProtClustDB: PRK12273 - BioCyc: CGLU196627:CG1697-MONOMER - BRENDA: 4.3.1.1 - InterPro: IPR004708 - InterPro: IPR003031 - InterPro: IPR018951 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00839
Pfam domain/function: PF10415 FumaraseC_C; PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.1.1
Molecular weight: Translated: 57569; Mature: 57438
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: BINDING 155-155
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTSNKSSADSKNDAKAEDIVNGENQIATNESQSSDSAAVSERVVEPKTTVQKKFRIES CCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCH DLLGELQIPSHAYYGVHTLRAVDNFQISRTTINHVPDFIRGMVQVKKAAALANRRLHTLP HHHCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC AQKAEAIVWACDQILIEERCMDQFPIDVFQGGAGTSLNMNTNEVVANLALEFLGHEKGEY CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE HILHPMDDVNMSQSTNDSYPTGFRLGIYAGLQTLIAEIDELQVAFRHKGNEFVDIIKMGR EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TQLQDAVPMSLGEEFRAFAHNLAEEQTVLREAANRLLEVNLGATAIGTGVNTPAGYRHQV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHH VAALSEVTGLELKSARDLIEATSDTGAYVHAHSAIKRAAMKLSKICNDLRLLSSGPRAGL HHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NEINLPPRQAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLTVTMAAEAGQLQLNVMEPVIG CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHH ESLFQSLRILGNAAKTLREKCVVGITANADVCRAYVDNSIGIITYLNPFLGHDIGDQIGK HHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHCCCCEEEEHHCHHHCCCHHHHHHH EAAETGRPVRELILEKKLMDEKTLEAVLSKENLMHPMFRGRLYLEN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC >Mature Secondary Structure SKTSNKSSADSKNDAKAEDIVNGENQIATNESQSSDSAAVSERVVEPKTTVQKKFRIES CCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCH DLLGELQIPSHAYYGVHTLRAVDNFQISRTTINHVPDFIRGMVQVKKAAALANRRLHTLP HHHCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC AQKAEAIVWACDQILIEERCMDQFPIDVFQGGAGTSLNMNTNEVVANLALEFLGHEKGEY CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE HILHPMDDVNMSQSTNDSYPTGFRLGIYAGLQTLIAEIDELQVAFRHKGNEFVDIIKMGR EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TQLQDAVPMSLGEEFRAFAHNLAEEQTVLREAANRLLEVNLGATAIGTGVNTPAGYRHQV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHH VAALSEVTGLELKSARDLIEATSDTGAYVHAHSAIKRAAMKLSKICNDLRLLSSGPRAGL HHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NEINLPPRQAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLTVTMAAEAGQLQLNVMEPVIG CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHH ESLFQSLRILGNAAKTLREKCVVGITANADVCRAYVDNSIGIITYLNPFLGHDIGDQIGK HHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHCCCCEEEEHHCHHHCCCHHHHHHH EAAETGRPVRELILEKKLMDEKTLEAVLSKENLMHPMFRGRLYLEN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7789816; 12948626