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The map label for this gene is dop [H]

Identifier: 62390378

GI number: 62390378

Start: 1576870

End: 1578414

Strand: Reverse

Name: dop [H]

Synonym: cg1690

Alternate gene names: 62390378

Gene position: 1578414-1576870 (Counterclockwise)

Preceding gene: 62390379

Following gene: 62390377

Centisome position: 48.08

GC content: 54.63

Gene sequence:

>1545_bases
ATGGCGCGTTTTATGGGATCGGAAACCGAATACGGCATTTCCACACCGTCTGCACCGTTTTTAAGCCCGATCGTTACTTC
CACGCACGCGGTGGTGGCGTATTCCACCGCGCGTGGATTTGGTGAGCACCGGGTGCGTTGGGACTATGCGCAAGAGTCCC
CACTGCGCGATACTCGTGGCTTTGATCTGCGCCGATACCACCAGGCCCCTGTGGTGGATCCGCACGCCATTGGTGTGGCC
AACGTGTTTGTGCCCAATGGTGCCAGGTTTTATGTCGATCACGCGCACCCGGAATACTCCTCCCCAGAGGTCACCAATGC
GTGGGATGCCATGGTTTACGACGCCGCTGGTGACCACATCCTCATGCAGGCCGTCTCTGATGTTGCGAGTTTCACCAGCC
AGAATAGGTCTGTGTTGGACGGCCATGATCCGTGTCCAGCTTTGAAAATCTACAAAAACAATGTCGACGGTAAGGGTGCT
AGCTACGGGTCCCACGAGAATTACCTCTACTCACGTGAGACGGATTTTGATGTGCTGGCTCAGGCATTGATCCCATTTTT
TGTGTGCCGCCAGGTCATCATCGGTGCCGGACGTGTGGGATTGGGCCCTCAGGGCGATAAGCCGGGATTCCAGGTCAGTC
AGCGAGCTGACTACATTGAGCAAGAAATTTCACTGGAAACCACACTCAACCGCGGCATTATCAACACCCGCGATGAACCA
CACACCGACGCTGATCACTGGGGTCGCCTGCACGTGATCATCGGCGATGCCAACATGTCGCAGACTGCGAATTTCCTCAA
ATTCGGCATGACCTCCCTAGTGCTGGATGCCATTGAGGCTGGGGTGGATTTCTCTGAACTCAAGCTGAAGAACGCAGTGA
GTGAAGTAGCAAAGGTCTCCCATGATCTTTCCCTTACCCACCAGCTGCGATTGGCGGATGGTTCAGAGCTCACCGCTATT
GATATTCTGCGCCGCTATTTGGACAAGGTGCAGCCGTTTGCAGAAACCCCAGTGGAACAGCGTGTCACTGCGCTGTGGGG
TGAAGTGCTGGGGCTCCTGGAGAATGATCTGCTCTCCACCAGCCATCTCCTTGATTGGACTGCAAAACTTGCCCTGATCA
AGTCTTTTGAGGCGCGTGGGCTGTCCATTAACGATCCCAAGATGTACCTCATTGACCTGCAGTACAGCGATATTGATCCA
CAGAAGAGTCTGTATCACGCACTGGTATCCAAGGGGCGGATGAAAACACTGTGCAGTGCGCAGGACATTGCAGATGCAGC
GGCCACTCCACCGCAGGACTCGCGGGCATACTTCCGCGGGCGTGTGATGGATAAATTTGGCGAATCAGTGCTCGCAGCCA
ACTGGGAATCGCTGATTGTTGCTACCTCCAGCGCTAAGGAATACCGCGTGCACACCAGCGGTTTAGATACCTTGACCCGA
GAGGAAGCAGGGGAGTTGGTGGAGAAATCCGCCACAATCGATGAGTTAATTGAGGGTCTTGAAAAGGAAAACTTGACCCC
GCTCACGGCCATCCAAGCTATTTAG

Upstream 100 bases:

>100_bases
GCAGAGCGAAGACCTGCCAAACACCTCCAACCCGGATGAATGGTCCAGGATCACTGGACGCCAGGGCAAGCAGGTTACTC
ACGCAGAGGTGGTTATCTAA

Downstream 100 bases:

>100_bases
GGTACCCTGAATAGGTGGTTAGGGGATGTCCCTAGAATCACCTCAGGGGTGAGCCAAACCCCTTCAACTAACCCATGTGA
CGGCGCTAACGTGTGATGGA

Product: proteasome component

Products: NA

Alternate protein names: Deamidase of protein Pup [H]

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MARFMGSETEYGISTPSAPFLSPIVTSTHAVVAYSTARGFGEHRVRWDYAQESPLRDTRGFDLRRYHQAPVVDPHAIGVA
NVFVPNGARFYVDHAHPEYSSPEVTNAWDAMVYDAAGDHILMQAVSDVASFTSQNRSVLDGHDPCPALKIYKNNVDGKGA
SYGSHENYLYSRETDFDVLAQALIPFFVCRQVIIGAGRVGLGPQGDKPGFQVSQRADYIEQEISLETTLNRGIINTRDEP
HTDADHWGRLHVIIGDANMSQTANFLKFGMTSLVLDAIEAGVDFSELKLKNAVSEVAKVSHDLSLTHQLRLADGSELTAI
DILRRYLDKVQPFAETPVEQRVTALWGEVLGLLENDLLSTSHLLDWTAKLALIKSFEARGLSINDPKMYLIDLQYSDIDP
QKSLYHALVSKGRMKTLCSAQDIADAAATPPQDSRAYFRGRVMDKFGESVLAANWESLIVATSSAKEYRVHTSGLDTLTR
EEAGELVEKSATIDELIEGLEKENLTPLTAIQAI

Sequences:

>Translated_514_residues
MARFMGSETEYGISTPSAPFLSPIVTSTHAVVAYSTARGFGEHRVRWDYAQESPLRDTRGFDLRRYHQAPVVDPHAIGVA
NVFVPNGARFYVDHAHPEYSSPEVTNAWDAMVYDAAGDHILMQAVSDVASFTSQNRSVLDGHDPCPALKIYKNNVDGKGA
SYGSHENYLYSRETDFDVLAQALIPFFVCRQVIIGAGRVGLGPQGDKPGFQVSQRADYIEQEISLETTLNRGIINTRDEP
HTDADHWGRLHVIIGDANMSQTANFLKFGMTSLVLDAIEAGVDFSELKLKNAVSEVAKVSHDLSLTHQLRLADGSELTAI
DILRRYLDKVQPFAETPVEQRVTALWGEVLGLLENDLLSTSHLLDWTAKLALIKSFEARGLSINDPKMYLIDLQYSDIDP
QKSLYHALVSKGRMKTLCSAQDIADAAATPPQDSRAYFRGRVMDKFGESVLAANWESLIVATSSAKEYRVHTSGLDTLTR
EEAGELVEKSATIDELIEGLEKENLTPLTAIQAI
>Mature_513_residues
ARFMGSETEYGISTPSAPFLSPIVTSTHAVVAYSTARGFGEHRVRWDYAQESPLRDTRGFDLRRYHQAPVVDPHAIGVAN
VFVPNGARFYVDHAHPEYSSPEVTNAWDAMVYDAAGDHILMQAVSDVASFTSQNRSVLDGHDPCPALKIYKNNVDGKGAS
YGSHENYLYSRETDFDVLAQALIPFFVCRQVIIGAGRVGLGPQGDKPGFQVSQRADYIEQEISLETTLNRGIINTRDEPH
TDADHWGRLHVIIGDANMSQTANFLKFGMTSLVLDAIEAGVDFSELKLKNAVSEVAKVSHDLSLTHQLRLADGSELTAID
ILRRYLDKVQPFAETPVEQRVTALWGEVLGLLENDLLSTSHLLDWTAKLALIKSFEARGLSINDPKMYLIDLQYSDIDPQ
KSLYHALVSKGRMKTLCSAQDIADAAATPPQDSRAYFRGRVMDKFGESVLAANWESLIVATSSAKEYRVHTSGLDTLTRE
EAGELVEKSATIDELIEGLEKENLTPLTAIQAI

Specific function: Specifically catalyzes the deamidation of the C-terminal glutamine of the prokaryotic ubiquitin-like protein Pup to glutamate, thereby rendering Pup competent for conjugation. Also displays depupylase (DPUP) activity, removing conjugated Pup from target p

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Pup ligase/Pup deamidase family. Pup deamidase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022366
- InterPro:   IPR004347 [H]

Pfam domain/function: PF03136 DUF245 [H]

EC number: NA

Molecular weight: Translated: 56730; Mature: 56599

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFMGSETEYGISTPSAPFLSPIVTSTHAVVAYSTARGFGEHRVRWDYAQESPLRDTRG
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEHHHCCCCCCCEEECCCCCCCCCCCCC
FDLRRYHQAPVVDPHAIGVANVFVPNGARFYVDHAHPEYSSPEVTNAWDAMVYDAAGDHI
CCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHEEECCCCCHH
LMQAVSDVASFTSQNRSVLDGHDPCPALKIYKNNVDGKGASYGSHENYLYSRETDFDVLA
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHH
QALIPFFVCRQVIIGAGRVGLGPQGDKPGFQVSQRADYIEQEISLETTLNRGIINTRDEP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HTDADHWGRLHVIIGDANMSQTANFLKFGMTSLVLDAIEAGVDFSELKLKNAVSEVAKVS
CCCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HDLSLTHQLRLADGSELTAIDILRRYLDKVQPFAETPVEQRVTALWGEVLGLLENDLLST
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SHLLDWTAKLALIKSFEARGLSINDPKMYLIDLQYSDIDPQKSLYHALVSKGRMKTLCSA
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHH
QDIADAAATPPQDSRAYFRGRVMDKFGESVLAANWESLIVATSSAKEYRVHTSGLDTLTR
HHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCEEEECCCCHHHHH
EEAGELVEKSATIDELIEGLEKENLTPLTAIQAI
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCC
>Mature Secondary Structure 
ARFMGSETEYGISTPSAPFLSPIVTSTHAVVAYSTARGFGEHRVRWDYAQESPLRDTRG
CCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEHHHCCCCCCCEEECCCCCCCCCCCCC
FDLRRYHQAPVVDPHAIGVANVFVPNGARFYVDHAHPEYSSPEVTNAWDAMVYDAAGDHI
CCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHEEECCCCCHH
LMQAVSDVASFTSQNRSVLDGHDPCPALKIYKNNVDGKGASYGSHENYLYSRETDFDVLA
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHH
QALIPFFVCRQVIIGAGRVGLGPQGDKPGFQVSQRADYIEQEISLETTLNRGIINTRDEP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HTDADHWGRLHVIIGDANMSQTANFLKFGMTSLVLDAIEAGVDFSELKLKNAVSEVAKVS
CCCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HDLSLTHQLRLADGSELTAIDILRRYLDKVQPFAETPVEQRVTALWGEVLGLLENDLLST
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SHLLDWTAKLALIKSFEARGLSINDPKMYLIDLQYSDIDPQKSLYHALVSKGRMKTLCSA
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHH
QDIADAAATPPQDSRAYFRGRVMDKFGESVLAANWESLIVATSSAKEYRVHTSGLDTLTR
HHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCEEEECCCCHHHHH
EEAGELVEKSATIDELIEGLEKENLTPLTAIQAI
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7583123 [H]