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The map label for this gene is ychJ [C]

Identifier: 62390321

GI number: 62390321

Start: 1516872

End: 1517261

Strand: Reverse

Name: ychJ [C]

Synonym: cg1626

Alternate gene names: 62390321

Gene position: 1517261-1516872 (Counterclockwise)

Preceding gene: 62390322

Following gene: 62390320

Centisome position: 46.22

GC content: 57.44

Gene sequence:

>390_bases
GTGGATTTTGAGTTGGGTAAACGCTGCCCCTGCGGAACTGGCCTTACCTACGGTGAGTGCTGCTACCGCTTTCACTCCGG
CGAATGGGTGGCCCCCACCGCTGAAGCGCTCATGCGATCTCGGTTCACCGCCTTTGCTGTTGGAAATTCCCAGTACCTTC
TTGACACTTGGGATCCAGAAACCCGGCCAAGCGAACTCGGCCTCGATATGGGAATTGATTTCTACCGCCTCGACATCCTC
GAGACCACCGGCGGTGGACCCTTCGATTCCACCGGCACCGTAAAATTCCAAGCCTTCTACAAGGGGCTCGCCTCCGGCGT
CCAAGAAGAAGACTCCACATTCCGCAAGGTCAACGGCGCGTGGGTCTATTCCACAGGAGATGTCGACTAG

Upstream 100 bases:

>100_bases
AGCGATGCTGACAGTGCTTCACTTCGGGCCGCATCTAATTCCTGCTCGATTACCCAACTGCTCGCGCAGGGAATCGTCAT
CGACGACGAGGTGAACTAGC

Downstream 100 bases:

>100_bases
TTTCCCCACACGTGCAATAGGTTATGACCAGCGGATTTCACTTTCCAGATCACACTGATGTAACCTATTCACGTTGGCTC
AGCCCGAGGGTTAAGAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDFELGKRCPCGTGLTYGECCYRFHSGEWVAPTAEALMRSRFTAFAVGNSQYLLDTWDPETRPSELGLDMGIDFYRLDIL
ETTGGGPFDSTGTVKFQAFYKGLASGVQEEDSTFRKVNGAWVYSTGDVD

Sequences:

>Translated_129_residues
MDFELGKRCPCGTGLTYGECCYRFHSGEWVAPTAEALMRSRFTAFAVGNSQYLLDTWDPETRPSELGLDMGIDFYRLDIL
ETTGGGPFDSTGTVKFQAFYKGLASGVQEEDSTFRKVNGAWVYSTGDVD
>Mature_129_residues
MDFELGKRCPCGTGLTYGECCYRFHSGEWVAPTAEALMRSRFTAFAVGNSQYLLDTWDPETRPSELGLDMGIDFYRLDIL
ETTGGGPFDSTGTVKFQAFYKGLASGVQEEDSTFRKVNGAWVYSTGDVD

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=127, Percent_Identity=37.007874015748, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 14284; Mature: 14284

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFELGKRCPCGTGLTYGECCYRFHSGEWVAPTAEALMRSRFTAFAVGNSQYLLDTWDPE
CCCCCCCCCCCCCCCCHHHHHEEECCCCEECHHHHHHHHHCCEEEEECCCCEEEECCCCC
TRPSELGLDMGIDFYRLDILETTGGGPFDSTGTVKFQAFYKGLASGVQEEDSTFRKVNGA
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCHHEECCCE
WVYSTGDVD
EEEECCCCC
>Mature Secondary Structure
MDFELGKRCPCGTGLTYGECCYRFHSGEWVAPTAEALMRSRFTAFAVGNSQYLLDTWDPE
CCCCCCCCCCCCCCCCHHHHHEEECCCCEECHHHHHHHHHCCEEEEECCCCEEEECCCCC
TRPSELGLDMGIDFYRLDILETTGGGPFDSTGTVKFQAFYKGLASGVQEEDSTFRKVNGA
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCHHEECCCE
WVYSTGDVD
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]