| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ubiE [H]
Identifier: 62390241
GI number: 62390241
Start: 1421535
End: 1422314
Strand: Reverse
Name: ubiE [H]
Synonym: cg1530
Alternate gene names: 62390241
Gene position: 1422314-1421535 (Counterclockwise)
Preceding gene: 62390246
Following gene: 62390238
Centisome position: 43.33
GC content: 56.28
Gene sequence:
>780_bases TTGAGCCAGTTCTCTCAAGCAAACCGATACTGGTGGGATGTGGACGCGGCCGACTATCACGAACGCCACCCTTCTTATTT AGGCACGGATTCCGCTCACGGCGAGTTCTACTGGTGCCCCGAGATGCTGCATGAAAAAGATGTACGTCTTCTTGGCACTC CCGCAGCACTCTCCGGCAAGAAAATTTTAGAGATCGGTTGCGGCTCGGCACCGTGTGCTCGGTGGCTGGCCAATGATGTT CCGAATGCCTTTGTCACCGCTTTCGACATTTCTTCACAAATGCTCAAATACGCAGGTCACGACCATAACGTACACCTCGT ACAGGCCGATGCAATGTCACTCCCCTACGCCGACAGTTCCTTTGACGTGGTCTTTTCCGTTTTCGGCGCCATCCCCTTTG TGGAGGATTCCGCCGCACTCATGAAGGAAATCGCGCGCGTCCTCAAACCCGGCGGACGCCTCATTTTCTCCATCACCCAC CCGATGCGCTGGATTTTCCTCGACGATCCCGGCCCCGCAGGCCTCACCGCGATCACCAGCTACTTCGACCAGCGCGGCTA CGTCGAAGAAGACGAGGAAACCGGTGCTTTAAGCTATGCGGAACAGCACCGCACCATGGGCGCGCGGATCAATGAGCTTA TCGACGCCTCCCTCCACTTAGATCACCTCATCGAACCAGAATGGCCAGATGAGTTGGAAGAAAACTGGGGCCAATGGTCA CCACTTCGAGGAAAGCTCTTCCCCGGGACAGCAATCTTCCTCGCCACGTACCGCCCCTAA
Upstream 100 bases:
>100_bases TAATAAACAGTACGCCGTTTGCGCAGCTAGAGCAAATAGAATGGCAAAAATGGGCACATACGATACTGATGGGACCAATG GGAAAACCTCAAGCCACCAA
Downstream 100 bases:
>100_bases AAAACCAACGGCGCTCATTTTTAAGCTGCTGTTGGTCTCGAATGCACGTTTTTGGTGCTCAAAACTGTCGAATCAGACCA AGCGCTCCCCTAATTTCCGA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDV PNAFVTAFDISSQMLKYAGHDHNVHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSAALMKEIARVLKPGGRLIFSITH PMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLIEPEWPDELEENWGQWS PLRGKLFPGTAIFLATYRP
Sequences:
>Translated_259_residues MSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDV PNAFVTAFDISSQMLKYAGHDHNVHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSAALMKEIARVLKPGGRLIFSITH PMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLIEPEWPDELEENWGQWS PLRGKLFPGTAIFLATYRP >Mature_258_residues SQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDVP NAFVTAFDISSQMLKYAGHDHNVHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSAALMKEIARVLKPGGRLIFSITHP MRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLIEPEWPDELEENWGQWSP LRGKLFPGTAIFLATYRP
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014122 - InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 29108; Mature: 28977
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGK CCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECHHHHCCCCCEEEECCCCCCCC KILEIGCGSAPCARWLANDVPNAFVTAFDISSQMLKYAGHDHNVHLVQADAMSLPYADSS EEEEECCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH FDVVFSVFGAIPFVEDSAALMKEIARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITS HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCHHHHHHH YFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLIEPEWPDELEENWGQWS HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC PLRGKLFPGTAIFLATYRP CCCCEECCCEEEEEEEECC >Mature Secondary Structure SQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGK CCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECHHHHCCCCCEEEECCCCCCCC KILEIGCGSAPCARWLANDVPNAFVTAFDISSQMLKYAGHDHNVHLVQADAMSLPYADSS EEEEECCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH FDVVFSVFGAIPFVEDSAALMKEIARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITS HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCHHHHHHH YFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLIEPEWPDELEENWGQWS HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC PLRGKLFPGTAIFLATYRP CCCCEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]