| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is entC [H]
Identifier: 62390178
GI number: 62390178
Start: 1361632
End: 1362762
Strand: Reverse
Name: entC [H]
Synonym: cg1462
Alternate gene names: 62390178
Gene position: 1362762-1361632 (Counterclockwise)
Preceding gene: 62390180
Following gene: 62390173
Centisome position: 41.51
GC content: 58.53
Gene sequence:
>1131_bases ATGTCTGCCCACCGCAACCCCTCTGCCCCCAACACCGCCCCAGATTTCCTCTTATCCAGAGGCCACGGGTCTGTGCGCAC CCAAGGATCAAAAGAAGTATTCACCGATCCCTGGGAGGCAGTAGACGCCCTTAAACAAGGGCGCGTAGCCATGGTGGTGG GTGCTTTGCCCTTCGAACGGGACAAACCAGCAGCACTGACTGTCCCAGAACACATCATCCGCGAAGACGGCCCCCTAGAA CCTCACGCCTACTACAGGTTTGGACCAGGCTCAGTACTGCACGCCAGCGTCGCAGGAATTGATCCCTCACCGATTGAGCA TTTACGACGCGTCAATGCAGCCATCAATACCATCAACAACACTGTCCTGAACAAAGTTGTGCTCGCGCGCGCCGTGGACA TCTCCTTCGAGCCACCCGTTGATCCCCTGCTGGTGGCCGCACGTTTGATTGATAACTCCCACAACAAGGACGGTTTCATC GCCGACCTGACCCCTGCAGGCCCAGACTTTGCAGGCCACATGCTGGTTGGATCCTCCCCGGAGGTGTTAATCAAACGCCA AGGTTCCACCATCACCGCATACCCACTGGCCGGCTCCGCACCACGGCTTGCCGATCCAGTGCGCGATGAAGCCCAAGGAC AAAACCTCCTGGCCAGCGCCAAAAACCTAGAAGAACACTCCTACGTGGTCAACCACCTGCGCACCATCCTGGAACCACTG TGCTCACAATTCGACGCCCCAACAGTTCCTGAACTGACCAAAACCAACGAAATGTGGCACCTCGCAACACCCATCGTTGG CACCCTCAAGTACCCACACATCACCGCACTAGAACTAGCCATCCGCACACACCCCACCCCCGCGATCTGTGGCACCCCCA CCGACGCCGCCGAAGCCCTCATCATCGAAGCGGAATCCCCCCGAAACTTCTACGCCGGAGCAGTCGGCTGGTGTGACTCC ACCGGAGACGGCGAATACATGGTAGCCATCCGCTGCGCCGAAGTATCCGAAGACGGAACCTGGGCCAGAGCATGGGCAGG CGGAGGCATCGTCGCCGAATCAGACGCCCAAGAAGAGTTTGATGAAACCACCGCGAAGCTCCAAACCATCATGCGCTCGC TTGGTTTGTGA
Upstream 100 bases:
>100_bases CAGAAACGAACACGAACATCAGTCATGCAGGCCATGTTAATAGCCCGCACCCACCGCCCGCGCGTTTACCCCAGTTCTAC TGGGATTAGAATGGCTAACC
Downstream 100 bases:
>100_bases GATGTGGTCTTAAAACACCGACTTCACGTGAGCTGACTTCTCACGCTCAACTTCTCGTGGGCAGACTGCACTCCGGATTC CGGGCTTTCACTACTGATGT
Product: isochorismate synthase
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSAHRNPSAPNTAPDFLLSRGHGSVRTQGSKEVFTDPWEAVDALKQGRVAMVVGALPFERDKPAALTVPEHIIREDGPLE PHAYYRFGPGSVLHASVAGIDPSPIEHLRRVNAAINTINNTVLNKVVLARAVDISFEPPVDPLLVAARLIDNSHNKDGFI ADLTPAGPDFAGHMLVGSSPEVLIKRQGSTITAYPLAGSAPRLADPVRDEAQGQNLLASAKNLEEHSYVVNHLRTILEPL CSQFDAPTVPELTKTNEMWHLATPIVGTLKYPHITALELAIRTHPTPAICGTPTDAAEALIIEAESPRNFYAGAVGWCDS TGDGEYMVAIRCAEVSEDGTWARAWAGGGIVAESDAQEEFDETTAKLQTIMRSLGL
Sequences:
>Translated_376_residues MSAHRNPSAPNTAPDFLLSRGHGSVRTQGSKEVFTDPWEAVDALKQGRVAMVVGALPFERDKPAALTVPEHIIREDGPLE PHAYYRFGPGSVLHASVAGIDPSPIEHLRRVNAAINTINNTVLNKVVLARAVDISFEPPVDPLLVAARLIDNSHNKDGFI ADLTPAGPDFAGHMLVGSSPEVLIKRQGSTITAYPLAGSAPRLADPVRDEAQGQNLLASAKNLEEHSYVVNHLRTILEPL CSQFDAPTVPELTKTNEMWHLATPIVGTLKYPHITALELAIRTHPTPAICGTPTDAAEALIIEAESPRNFYAGAVGWCDS TGDGEYMVAIRCAEVSEDGTWARAWAGGGIVAESDAQEEFDETTAKLQTIMRSLGL >Mature_375_residues SAHRNPSAPNTAPDFLLSRGHGSVRTQGSKEVFTDPWEAVDALKQGRVAMVVGALPFERDKPAALTVPEHIIREDGPLEP HAYYRFGPGSVLHASVAGIDPSPIEHLRRVNAAINTINNTVLNKVVLARAVDISFEPPVDPLLVAARLIDNSHNKDGFIA DLTPAGPDFAGHMLVGSSPEVLIKRQGSTITAYPLAGSAPRLADPVRDEAQGQNLLASAKNLEEHSYVVNHLRTILEPLC SQFDAPTVPELTKTNEMWHLATPIVGTLKYPHITALELAIRTHPTPAICGTPTDAAEALIIEAESPRNFYAGAVGWCDST GDGEYMVAIRCAEVSEDGTWARAWAGGGIVAESDAQEEFDETTAKLQTIMRSLGL
Specific function: Might be involved in the biosynthesis of menaquinone. Converts chorismate to isochorismate [H]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=337, Percent_Identity=35.6083086053413, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI87082077, Length=277, Percent_Identity=30.6859205776173, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1787518, Length=213, Percent_Identity=32.3943661971831, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788114, Length=204, Percent_Identity=29.9019607843137, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=209, Percent_Identity=33.0143540669856, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 40373; Mature: 40242
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHRNPSAPNTAPDFLLSRGHGSVRTQGSKEVFTDPWEAVDALKQGRVAMVVGALPFER CCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC DKPAALTVPEHIIREDGPLEPHAYYRFGPGSVLHASVAGIDPSPIEHLRRVNAAINTINN CCCCEEECCHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH TVLNKVVLARAVDISFEPPVDPLLVAARLIDNSHNKDGFIADLTPAGPDFAGHMLVGSSP HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCCC EVLIKRQGSTITAYPLAGSAPRLADPVRDEAQGQNLLASAKNLEEHSYVVNHLRTILEPL CEEEEECCCEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CSQFDAPTVPELTKTNEMWHLATPIVGTLKYPHITALELAIRTHPTPAICGTPTDAAEAL HHHCCCCCCCCCCCCCCEEEECCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEE IIEAESPRNFYAGAVGWCDSTGDGEYMVAIRCAEVSEDGTWARAWAGGGIVAESDAQEEF EEECCCCCCEECCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCEEECCCCHHHH DETTAKLQTIMRSLGL HHHHHHHHHHHHHHCC >Mature Secondary Structure SAHRNPSAPNTAPDFLLSRGHGSVRTQGSKEVFTDPWEAVDALKQGRVAMVVGALPFER CCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC DKPAALTVPEHIIREDGPLEPHAYYRFGPGSVLHASVAGIDPSPIEHLRRVNAAINTINN CCCCEEECCHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH TVLNKVVLARAVDISFEPPVDPLLVAARLIDNSHNKDGFIADLTPAGPDFAGHMLVGSSP HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCCC EVLIKRQGSTITAYPLAGSAPRLADPVRDEAQGQNLLASAKNLEEHSYVVNHLRTILEPL CEEEEECCCEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CSQFDAPTVPELTKTNEMWHLATPIVGTLKYPHITALELAIRTHPTPAICGTPTDAAEAL HHHCCCCCCCCCCCCCCEEEECCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEE IIEAESPRNFYAGAVGWCDSTGDGEYMVAIRCAEVSEDGTWARAWAGGGIVAESDAQEEF EEECCCCCCEECCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCEEECCCCHHHH DETTAKLQTIMRSLGL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]