| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ilvD [H]
Identifier: 62390155
GI number: 62390155
Start: 1334908
End: 1336749
Strand: Reverse
Name: ilvD [H]
Synonym: cg1432
Alternate gene names: 62390155
Gene position: 1336749-1334908 (Counterclockwise)
Preceding gene: 62390156
Following gene: 62390154
Centisome position: 40.72
GC content: 59.07
Gene sequence:
>1842_bases ATGATCCCACTTCGTTCAAAAGTCACCACCGTCGGTCGCAATGCAGCTGGCGCTCGCGCCCTTTGGCGTGCCACCGGCAC CAAGGAAAATGAGTTCGGCAAGCCAATTGTTGCCATCGTAAACTCCTACACCCAGTTCGTGCCCGGACACGTTCACCTTA AGAACGTCGGCGATATTGTGGCAGATGCAGTGCGCAAAGCCGGTGGCGTTCCAAAGGAATTCAACACCATCGCCGTCGAT GACGGCATCGCCATGGGACACGGCGGCATGCTGTACTCCCTGCCATCCCGTGAAATCATCGCCGACTCCGTCGAATACAT GGTCAACGCACACACCGCCGACGCCATGGTGTGTATCTCCAACTGTGACAAGATCACCCCAGGCATGCTCAACGCAGCAA TGCGCCTGAACATCCCAGTGGTCTTCGTTTCCGGTGGCCCAATGGAAGCTGGCAAGGCTGTCGTCGTTGACGGCGTTGCA CACGCACCAACCGACCTCATCACCGCGATCTCCGCATCCGCAAGCGATGCAGTCGACGACGCAGGCCTTGCAGCCGTTGA AGCATCCGCATGCCCAACCTGTGGCTCCTGCTCCGGTATGTTCACCGCGAACTCCATGAACTGCCTCACCGAAGCTCTGG GACTTTCTCTCCCGGGCAACGGCTCCACTCTGGCAACCCACGCAGCACGTCGCGCACTGTTTGAAAAGGCCGGCGAAACC GTCGTTGAACTGTGCCGCCGCTACTACGGTGAAGAAGACGAATCCGTTCTGCCACGTGGCATTGCCACCAAGAAGGCATT CGAAAACGCAATGGCACTGGATATGGCCATGGGTGGATCCACCAACACCATCCTCCACATCCTCGCAGCTGCCCAGGAAG GCGAAGTTGACTTCGACCTCGCAGACATCGACGAACTGTCCAAAAACGTCCCCTGCCTGTCCAAGGTTGCACCAAACTCC GACTACCACATGGAAGACGTCCACCGCGCCGGTGGCATTCCAGCACTGCTCGGCGAGCTCAACCGCGGTGGCCTGCTGAA CAAGGACGTCCACTCCGTTCACTCCAACGACCTTGAAGGTTGGTTGGATGACTGGGATATCCGCTCTGGCAAGACCACCG AAGTAGCAACCGAACTCTTCCACGCAGCCCCAGGTGGCATCCGCACCACCGAAGCATTCTCCACCGAGAACCGCTGGGAC GAACTCGACACCGACGCTGCCAAGGGCTGCATCCGCGACGTTGAACACGCCTACACCGCCGACGGCGGCCTGGTTGTTCT TCGCGGCAACATCTCCCCTGACGGCGCAGTGATCAAGTCCGCAGGTATCGAAGAAGAGCTGTGGAACTTCACCGGACCAG CACGAGTTGTCGAAAGCCAGGAAGAGGCAGTCTCTGTCATCCTGACCAAGACCATCCAAGCTGGCGAAGTTCTGGTCGTC CGCTACGAAGGCCCATCAGGTGGACCAGGCATGCAGGAAATGCTTCACCCAACCGCATTCCTCAAGGGATCCGGCCTGGG CAAGAAGTGTGCACTGATCACCGACGGCCGTTTCTCCGGAGGTTCCTCAGGACTGTCCATCGGCCACGTCTCCCCAGAAG CAGCACACGGCGGAGTCATTGGTCTGATCGAAAACGGCGACATCGTCTCCATCGACGTTCACAACCGCAAGCTCGAAGTT CAGGTCTCCGACGAGGAACTCCAGCGCCGCCGCGACGCTATGAACGCCTCCGAGAAGCCATGGCAGCCAGTCAACCGTAA CCGCGTTGTCACCAAGGCACTGCGCGCATACGCAAAGATGGCTACCTCCGCTGATAAGGGTGCAGTCCGTCAGGTCGACT AA
Upstream 100 bases:
>100_bases CCACACCTCTGCACGAGTAGAAGCTCACCCAAGTTTTCAAAGTGCCGTTGATTCTTGACAACCACCCGCCGCTCTTTAGA GCAGATTTGAAAAGCGCATC
Downstream 100 bases:
>100_bases CCCTTTGTGAGTGTTTGAGCACCGGTTCCCTACTTTGGGTTCCGGTGCTTTTTCATGTCTTGGCCTGTGTGGGCGTGGTG GAGCTCCCCGTTGCAAATAC
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD 1 [H]
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MIPLRSKVTTVGRNAAGARALWRATGTKENEFGKPIVAIVNSYTQFVPGHVHLKNVGDIVADAVRKAGGVPKEFNTIAVD DGIAMGHGGMLYSLPSREIIADSVEYMVNAHTADAMVCISNCDKITPGMLNAAMRLNIPVVFVSGGPMEAGKAVVVDGVA HAPTDLITAISASASDAVDDAGLAAVEASACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLATHAARRALFEKAGET VVELCRRYYGEEDESVLPRGIATKKAFENAMALDMAMGGSTNTILHILAAAQEGEVDFDLADIDELSKNVPCLSKVAPNS DYHMEDVHRAGGIPALLGELNRGGLLNKDVHSVHSNDLEGWLDDWDIRSGKTTEVATELFHAAPGGIRTTEAFSTENRWD ELDTDAAKGCIRDVEHAYTADGGLVVLRGNISPDGAVIKSAGIEEELWNFTGPARVVESQEEAVSVILTKTIQAGEVLVV RYEGPSGGPGMQEMLHPTAFLKGSGLGKKCALITDGRFSGGSSGLSIGHVSPEAAHGGVIGLIENGDIVSIDVHNRKLEV QVSDEELQRRRDAMNASEKPWQPVNRNRVVTKALRAYAKMATSADKGAVRQVD
Sequences:
>Translated_613_residues MIPLRSKVTTVGRNAAGARALWRATGTKENEFGKPIVAIVNSYTQFVPGHVHLKNVGDIVADAVRKAGGVPKEFNTIAVD DGIAMGHGGMLYSLPSREIIADSVEYMVNAHTADAMVCISNCDKITPGMLNAAMRLNIPVVFVSGGPMEAGKAVVVDGVA HAPTDLITAISASASDAVDDAGLAAVEASACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLATHAARRALFEKAGET VVELCRRYYGEEDESVLPRGIATKKAFENAMALDMAMGGSTNTILHILAAAQEGEVDFDLADIDELSKNVPCLSKVAPNS DYHMEDVHRAGGIPALLGELNRGGLLNKDVHSVHSNDLEGWLDDWDIRSGKTTEVATELFHAAPGGIRTTEAFSTENRWD ELDTDAAKGCIRDVEHAYTADGGLVVLRGNISPDGAVIKSAGIEEELWNFTGPARVVESQEEAVSVILTKTIQAGEVLVV RYEGPSGGPGMQEMLHPTAFLKGSGLGKKCALITDGRFSGGSSGLSIGHVSPEAAHGGVIGLIENGDIVSIDVHNRKLEV QVSDEELQRRRDAMNASEKPWQPVNRNRVVTKALRAYAKMATSADKGAVRQVD >Mature_613_residues MIPLRSKVTTVGRNAAGARALWRATGTKENEFGKPIVAIVNSYTQFVPGHVHLKNVGDIVADAVRKAGGVPKEFNTIAVD DGIAMGHGGMLYSLPSREIIADSVEYMVNAHTADAMVCISNCDKITPGMLNAAMRLNIPVVFVSGGPMEAGKAVVVDGVA HAPTDLITAISASASDAVDDAGLAAVEASACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLATHAARRALFEKAGET VVELCRRYYGEEDESVLPRGIATKKAFENAMALDMAMGGSTNTILHILAAAQEGEVDFDLADIDELSKNVPCLSKVAPNS DYHMEDVHRAGGIPALLGELNRGGLLNKDVHSVHSNDLEGWLDDWDIRSGKTTEVATELFHAAPGGIRTTEAFSTENRWD ELDTDAAKGCIRDVEHAYTADGGLVVLRGNISPDGAVIKSAGIEEELWNFTGPARVVESQEEAVSVILTKTIQAGEVLVV RYEGPSGGPGMQEMLHPTAFLKGSGLGKKCALITDGRFSGGSSGLSIGHVSPEAAHGGVIGLIENGDIVSIDVHNRKLEV QVSDEELQRRRDAMNASEKPWQPVNRNRVVTKALRAYAKMATSADKGAVRQVD
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=612, Percent_Identity=65.6862745098039, Blast_Score=827, Evalue=0.0, Organism=Escherichia coli, GI1788157, Length=550, Percent_Identity=28.9090909090909, Blast_Score=195, Evalue=6e-51, Organism=Escherichia coli, GI2367371, Length=558, Percent_Identity=30.2867383512545, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI1786464, Length=526, Percent_Identity=30.7984790874525, Blast_Score=170, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322476, Length=609, Percent_Identity=34.4827586206897, Blast_Score=323, Evalue=6e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 64675; Mature: 64675
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLRSKVTTVGRNAAGARALWRATGTKENEFGKPIVAIVNSYTQFVPGHVHLKNVGDIV CCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHH ADAVRKAGGVPKEFNTIAVDDGIAMGHGGMLYSLPSREIIADSVEYMVNAHTADAMVCIS HHHHHHHCCCCCCCCEEEECCCEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEC NCDKITPGMLNAAMRLNIPVVFVSGGPMEAGKAVVVDGVAHAPTDLITAISASASDAVDD CCCCCCCHHHHHEEEECCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCC AGLAAVEASACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLATHAARRALFEKAGET CCCEEEECCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHH VVELCRRYYGEEDESVLPRGIATKKAFENAMALDMAMGGSTNTILHILAAAQEGEVDFDL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCH ADIDELSKNVPCLSKVAPNSDYHMEDVHRAGGIPALLGELNRGGLLNKDVHSVHSNDLEG HHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHCCCCCCC WLDDWDIRSGKTTEVATELFHAAPGGIRTTEAFSTENRWDELDTDAAKGCIRDVEHAYTA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHCCCHHHHHHHHHHHHHHCC DGGLVVLRGNISPDGAVIKSAGIEEELWNFTGPARVVESQEEAVSVILTKTIQAGEVLVV CCCEEEEECCCCCCCCEEECCCCHHHHHCCCCCHHHHHCHHHHHHHHHHHCCCCCCEEEE RYEGPSGGPGMQEMLHPTAFLKGSGLGKKCALITDGRFSGGSSGLSIGHVSPEAAHGGVI EECCCCCCCCHHHHHCHHHHEECCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCEE GLIENGDIVSIDVHNRKLEVQVSDEELQRRRDAMNASEKPWQPVNRNRVVTKALRAYAKM EEEECCCEEEEEECCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ATSADKGAVRQVD HCCCCCCCCCCCC >Mature Secondary Structure MIPLRSKVTTVGRNAAGARALWRATGTKENEFGKPIVAIVNSYTQFVPGHVHLKNVGDIV CCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHH ADAVRKAGGVPKEFNTIAVDDGIAMGHGGMLYSLPSREIIADSVEYMVNAHTADAMVCIS HHHHHHHCCCCCCCCEEEECCCEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEC NCDKITPGMLNAAMRLNIPVVFVSGGPMEAGKAVVVDGVAHAPTDLITAISASASDAVDD CCCCCCCHHHHHEEEECCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCC AGLAAVEASACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLATHAARRALFEKAGET CCCEEEECCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHH VVELCRRYYGEEDESVLPRGIATKKAFENAMALDMAMGGSTNTILHILAAAQEGEVDFDL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCH ADIDELSKNVPCLSKVAPNSDYHMEDVHRAGGIPALLGELNRGGLLNKDVHSVHSNDLEG HHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHCCCCCCC WLDDWDIRSGKTTEVATELFHAAPGGIRTTEAFSTENRWDELDTDAAKGCIRDVEHAYTA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHCCCHHHHHHHHHHHHHHCC DGGLVVLRGNISPDGAVIKSAGIEEELWNFTGPARVVESQEEAVSVILTKTIQAGEVLVV CCCEEEEECCCCCCCCEEECCCCHHHHHCCCCCHHHHHCHHHHHHHHHHHCCCCCCEEEE RYEGPSGGPGMQEMLHPTAFLKGSGLGKKCALITDGRFSGGSSGLSIGHVSPEAAHGGVI EECCCCCCCCHHHHHCHHHHEECCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCEE GLIENGDIVSIDVHNRKLEVQVSDEELQRRRDAMNASEKPWQPVNRNRVVTKALRAYAKM EEEECCCEEEEEECCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ATSADKGAVRQVD HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]