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The map label for this gene is glgB

Identifier: 62390112

GI number: 62390112

Start: 1288746

End: 1290941

Strand: Reverse

Name: glgB

Synonym: cg1381

Alternate gene names: 62390112

Gene position: 1290941-1288746 (Counterclockwise)

Preceding gene: 62390113

Following gene: 62390105

Centisome position: 39.33

GC content: 56.65

Gene sequence:

>2196_bases
ATGACCGTTGACCCCGCGAGCCACATCACCATCCCTGAAGCAGATCTGGCCCGCCTGCGCCACTGCAACCATCACGATCC
TCATGGATTTTATGGTTGGCATGAGACCGAAGCTGGTTCGGTTATCCGCACGCGCCAGGTCGGCGCGACGCAGGTTAATT
TGCTTATCGACGACACCTCCCACGTCATGACCCCTATCGGCGACGACATTTTCGCAATTGACTTAGGTCACCGCGAGCGC
GCTGACTATCGCTTGGAAGTCACCTGGCCTGATCAAGAACCGCAGGTCAAGGCTGATCCATACTACTTCCTCCCCACCGT
AGGCGAGATGGATATTTACCTCTTCTCTGAGGGACGCCATGAGCGTTTGTGGGAGATTCTCGGTGCCAACATCAAGACCT
ACCAAACTGCGCTCGGAACAGTTCGTGGCACCGCATTTACTGTGTGGGCTCCAAACGCAATTGGCTGCGCAGTGGTCGGT
GGCTTCAACGGTTGGAATGCATCCCAGCATCCGATGCGTTCTATGGGTGGTTCGGGTCTGTGGGAGCTGTTCATCCCAGG
CATAGAGGAAGGCGAAGTGTACAAATTCGCCGTCCAAACCAGGGAAGGCCAACGTCGTGATAAGGCCGATCCGATGGCTC
GTCGCGCAGAACTGGCGCCGGCAACCGGATCTATTGTCGCTTCCTCTGAGTACCAGTGGCAGGATTCCGAGTGGCTGCGC
GAGCGTTCCCAAACTGATCTCGCATCCAAGCCAATGAGTGTCTACGAGGTCCACCTCGGTTCTTGGCGCTGGGGTAAGAA
CTATGAGGATTTGGCTACTGAGCTGGTTGATTACGTCGCAGATCTTGGCTACACCCACGTGGAATTCCTCCCTGTCGCAG
AGCACCCCTTCGGTGGTTCCTGGGGTTACCAGGTCACCGGCTACTACGCACCGACCTCTCGTTGGGGTACTCCAGATCAG
TTCCGTGCGCTAGTCGACGCTTTCCACGCCCGCGGTATTGGCGTGATCATGGACTGGGTTCCTGCCCACTTCCCTAAGGA
TGATTGGGCTCTTGCCCGCTTTGATGGCGAAGCCCTCTATGAACACCCTGACTGGAGGCGCGGCGAACAAAAGGATTGGG
GCACCCTGGTCTTTGACTTCGGTCGCAACGAAGTCCGCAACTTCCTCGTCGCTAATGCGTTGTACTGGATTGAAGAATTC
CACATCGATGGTCTGCGCGTCGACGCCGTGGCCTCCATGCTGTACCTCGATTACTCCCGTGAGCACGGCGAATGGGAACC
AAACATCTACGGTGGTCGCGAGAACCTCGAGGCAGTGCAGTTCCTGCAGGAAATGAACGCCACGGTGCTGCGACTGCACC
CTGGTGCGCTCACCATCGCTGAGGAATCAACTTCATGGCCTGGCGTGACCGCACCAACGTGGGACGGCGGCTTGGGATTC
TCCCTCAAGTGGAACATGGGCTGGATGCACGACACCTTAGAGTACTTCTCCAAAAACCCTGTGCACCGCGCATTCCACCA
CAGTGAGCTCACTTTCTCCTTGGTGTACGCATTCTCTGAGCGTTTTGTACTTCCGATCTCTCACGATGAAGTCGTCCACG
GCAAGGGTTCCCTGTGGGACCGTATGCCTGGCGATACGTGGAACAAGGCCGCTGGTCTTCGCACCTTCCTTGCGTACATG
TGGTCACACCCAGGCAAGAAGCTGCTTTTCATGGGTCAGGAGTTTGGTCAGCGTGAAGAGTGGGCTGAAGGCCAGGGACT
GCCATGGGATATTGTCGACGGCTGGCAAGGCGAGTACCACGAAGCCATCCGCACTCTGACCCGCTCCCTCAACGGTGTCT
ACTCAGACTCCCCTGCGCTGCACACTCAGGATTTCACCGGAGAAGGCTTCACATGGAATAAGGGCGACGACGCCACCAAC
AACATTTTGGCGTTCACTCGTTTCGGCAGCGACGGCTCCCAGATGCTGTGTGTATTCAACCTGTCTGGAACCTCCCAGCC
TGAGTACCAGCTCGGTGTTGCAGCGGGTGGCGAATGGAAGCTCGTTCTCAACACTGATGATGCTGAATTCCTCGGTGCAG
AAAACGATATCGCTACTTCCGTTCAAGCAGCAGCGACACCACGCGATAATTTCGCCTACTCACTCTCACTGCATGTCCCA
GCGATGAGTGCTCAGTTCTACTCACTGCAGAAGTAG

Upstream 100 bases:

>100_bases
GAACTTCCAGCGTCTCGCCGTGAGCGTCTCGCGTGGCGCGAAATCAAGACCTACCGCGCGTAATTTCCCATCTCTGTACC
TTCTATCAAGGATTATCATC

Downstream 100 bases:

>100_bases
GACACAGGAAAATGCATCCTTGGGCCAATACCGGCTCAAGGATGCAAATTTTCTACCAAAATGGCTAGTTCGGAGGCCAG
CGGGATCGAATATTCGCGCC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MTVDPASHITIPEADLARLRHCNHHDPHGFYGWHETEAGSVIRTRQVGATQVNLLIDDTSHVMTPIGDDIFAIDLGHRER
ADYRLEVTWPDQEPQVKADPYYFLPTVGEMDIYLFSEGRHERLWEILGANIKTYQTALGTVRGTAFTVWAPNAIGCAVVG
GFNGWNASQHPMRSMGGSGLWELFIPGIEEGEVYKFAVQTREGQRRDKADPMARRAELAPATGSIVASSEYQWQDSEWLR
ERSQTDLASKPMSVYEVHLGSWRWGKNYEDLATELVDYVADLGYTHVEFLPVAEHPFGGSWGYQVTGYYAPTSRWGTPDQ
FRALVDAFHARGIGVIMDWVPAHFPKDDWALARFDGEALYEHPDWRRGEQKDWGTLVFDFGRNEVRNFLVANALYWIEEF
HIDGLRVDAVASMLYLDYSREHGEWEPNIYGGRENLEAVQFLQEMNATVLRLHPGALTIAEESTSWPGVTAPTWDGGLGF
SLKWNMGWMHDTLEYFSKNPVHRAFHHSELTFSLVYAFSERFVLPISHDEVVHGKGSLWDRMPGDTWNKAAGLRTFLAYM
WSHPGKKLLFMGQEFGQREEWAEGQGLPWDIVDGWQGEYHEAIRTLTRSLNGVYSDSPALHTQDFTGEGFTWNKGDDATN
NILAFTRFGSDGSQMLCVFNLSGTSQPEYQLGVAAGGEWKLVLNTDDAEFLGAENDIATSVQAAATPRDNFAYSLSLHVP
AMSAQFYSLQK

Sequences:

>Translated_731_residues
MTVDPASHITIPEADLARLRHCNHHDPHGFYGWHETEAGSVIRTRQVGATQVNLLIDDTSHVMTPIGDDIFAIDLGHRER
ADYRLEVTWPDQEPQVKADPYYFLPTVGEMDIYLFSEGRHERLWEILGANIKTYQTALGTVRGTAFTVWAPNAIGCAVVG
GFNGWNASQHPMRSMGGSGLWELFIPGIEEGEVYKFAVQTREGQRRDKADPMARRAELAPATGSIVASSEYQWQDSEWLR
ERSQTDLASKPMSVYEVHLGSWRWGKNYEDLATELVDYVADLGYTHVEFLPVAEHPFGGSWGYQVTGYYAPTSRWGTPDQ
FRALVDAFHARGIGVIMDWVPAHFPKDDWALARFDGEALYEHPDWRRGEQKDWGTLVFDFGRNEVRNFLVANALYWIEEF
HIDGLRVDAVASMLYLDYSREHGEWEPNIYGGRENLEAVQFLQEMNATVLRLHPGALTIAEESTSWPGVTAPTWDGGLGF
SLKWNMGWMHDTLEYFSKNPVHRAFHHSELTFSLVYAFSERFVLPISHDEVVHGKGSLWDRMPGDTWNKAAGLRTFLAYM
WSHPGKKLLFMGQEFGQREEWAEGQGLPWDIVDGWQGEYHEAIRTLTRSLNGVYSDSPALHTQDFTGEGFTWNKGDDATN
NILAFTRFGSDGSQMLCVFNLSGTSQPEYQLGVAAGGEWKLVLNTDDAEFLGAENDIATSVQAAATPRDNFAYSLSLHVP
AMSAQFYSLQK
>Mature_730_residues
TVDPASHITIPEADLARLRHCNHHDPHGFYGWHETEAGSVIRTRQVGATQVNLLIDDTSHVMTPIGDDIFAIDLGHRERA
DYRLEVTWPDQEPQVKADPYYFLPTVGEMDIYLFSEGRHERLWEILGANIKTYQTALGTVRGTAFTVWAPNAIGCAVVGG
FNGWNASQHPMRSMGGSGLWELFIPGIEEGEVYKFAVQTREGQRRDKADPMARRAELAPATGSIVASSEYQWQDSEWLRE
RSQTDLASKPMSVYEVHLGSWRWGKNYEDLATELVDYVADLGYTHVEFLPVAEHPFGGSWGYQVTGYYAPTSRWGTPDQF
RALVDAFHARGIGVIMDWVPAHFPKDDWALARFDGEALYEHPDWRRGEQKDWGTLVFDFGRNEVRNFLVANALYWIEEFH
IDGLRVDAVASMLYLDYSREHGEWEPNIYGGRENLEAVQFLQEMNATVLRLHPGALTIAEESTSWPGVTAPTWDGGLGFS
LKWNMGWMHDTLEYFSKNPVHRAFHHSELTFSLVYAFSERFVLPISHDEVVHGKGSLWDRMPGDTWNKAAGLRTFLAYMW
SHPGKKLLFMGQEFGQREEWAEGQGLPWDIVDGWQGEYHEAIRTLTRSLNGVYSDSPALHTQDFTGEGFTWNKGDDATNN
ILAFTRFGSDGSQMLCVFNLSGTSQPEYQLGVAAGGEWKLVLNTDDAEFLGAENDIATSVQAAATPRDNFAYSLSLHVPA
MSAQFYSLQK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=635, Percent_Identity=27.4015748031496, Blast_Score=185, Evalue=1e-46,
Organism=Escherichia coli, GI1789839, Length=710, Percent_Identity=45.9154929577465, Blast_Score=624, Evalue=1e-180,
Organism=Escherichia coli, GI2367229, Length=311, Percent_Identity=24.7588424437299, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17554896, Length=605, Percent_Identity=25.9504132231405, Blast_Score=170, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI32564391, Length=576, Percent_Identity=26.3888888888889, Blast_Score=156, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6320826, Length=681, Percent_Identity=25.1101321585903, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28573410, Length=643, Percent_Identity=26.7496111975117, Blast_Score=182, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_CORGL (Q8NR40)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927151
- RefSeq:   NP_600448.1
- RefSeq:   YP_225514.1
- ProteinModelPortal:   Q8NR40
- SMR:   Q8NR40
- GeneID:   1019207
- GeneID:   3344821
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg1381
- KEGG:   cgl:NCgl1177
- HOGENOM:   HBG287139
- OMA:   DGTCLYE
- PhylomeDB:   Q8NR40
- ProtClustDB:   PRK05402
- BioCyc:   CGLU196627:CG1381-MONOMER
- BRENDA:   2.4.1.18
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 82594; Mature: 82462

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: ACT_SITE 303-303 ACT_SITE 338-338 ACT_SITE 343-343 ACT_SITE 406-406 ACT_SITE 408-408 ACT_SITE 461-461 ACT_SITE 528-528 ACT_SITE 529-529

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDPASHITIPEADLARLRHCNHHDPHGFYGWHETEAGSVIRTRQVGATQVNLLIDDTS
CCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCC
HVMTPIGDDIFAIDLGHRERADYRLEVTWPDQEPQVKADPYYFLPTVGEMDIYLFSEGRH
HHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCH
ERLWEILGANIKTYQTALGTVRGTAFTVWAPNAIGCAVVGGFNGWNASQHPMRSMGGSGL
HHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCE
WELFIPGIEEGEVYKFAVQTREGQRRDKADPMARRAELAPATGSIVASSEYQWQDSEWLR
EEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHHHHH
ERSQTDLASKPMSVYEVHLGSWRWGKNYEDLATELVDYVADLGYTHVEFLPVAEHPFGGS
HHHHCHHHCCCCEEEEEEECCEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
WGYQVTGYYAPTSRWGTPDQFRALVDAFHARGIGVIMDWVPAHFPKDDWALARFDGEALY
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCHHC
EHPDWRRGEQKDWGTLVFDFGRNEVRNFLVANALYWIEEFHIDGLRVDAVASMLYLDYSR
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEECC
EHGEWEPNIYGGRENLEAVQFLQEMNATVLRLHPGALTIAEESTSWPGVTAPTWDGGLGF
CCCCCCCCEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCE
SLKWNMGWMHDTLEYFSKNPVHRAFHHSELTFSLVYAFSERFVLPISHDEVVHGKGSLWD
EEEECCCHHHHHHHHHCCCCHHHHHCCCCHHHEEEEEHHCCEEEEECCCCEECCCCCCCC
RMPGDTWNKAAGLRTFLAYMWSHPGKKLLFMGQEFGQREEWAEGQGLPWDIVDGWQGEYH
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHCCCCCCCCCCCCCCCCHHH
EAIRTLTRSLNGVYSDSPALHTQDFTGEGFTWNKGDDATNNILAFTRFGSDGSQMLCVFN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEE
LSGTSQPEYQLGVAAGGEWKLVLNTDDAEFLGAENDIATSVQAAATPRDNFAYSLSLHVP
CCCCCCCCEEEEEECCCEEEEEEECCCHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECC
AMSAQFYSLQK
CCCCCHHCCCC
>Mature Secondary Structure 
TVDPASHITIPEADLARLRHCNHHDPHGFYGWHETEAGSVIRTRQVGATQVNLLIDDTS
CCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCC
HVMTPIGDDIFAIDLGHRERADYRLEVTWPDQEPQVKADPYYFLPTVGEMDIYLFSEGRH
HHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCH
ERLWEILGANIKTYQTALGTVRGTAFTVWAPNAIGCAVVGGFNGWNASQHPMRSMGGSGL
HHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCE
WELFIPGIEEGEVYKFAVQTREGQRRDKADPMARRAELAPATGSIVASSEYQWQDSEWLR
EEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHHHHH
ERSQTDLASKPMSVYEVHLGSWRWGKNYEDLATELVDYVADLGYTHVEFLPVAEHPFGGS
HHHHCHHHCCCCEEEEEEECCEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
WGYQVTGYYAPTSRWGTPDQFRALVDAFHARGIGVIMDWVPAHFPKDDWALARFDGEALY
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCHHC
EHPDWRRGEQKDWGTLVFDFGRNEVRNFLVANALYWIEEFHIDGLRVDAVASMLYLDYSR
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEECC
EHGEWEPNIYGGRENLEAVQFLQEMNATVLRLHPGALTIAEESTSWPGVTAPTWDGGLGF
CCCCCCCCEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCE
SLKWNMGWMHDTLEYFSKNPVHRAFHHSELTFSLVYAFSERFVLPISHDEVVHGKGSLWD
EEEECCCHHHHHHHHHCCCCHHHHHCCCCHHHEEEEEHHCCEEEEECCCCEECCCCCCCC
RMPGDTWNKAAGLRTFLAYMWSHPGKKLLFMGQEFGQREEWAEGQGLPWDIVDGWQGEYH
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHCCCCCCCCCCCCCCCCHHH
EAIRTLTRSLNGVYSDSPALHTQDFTGEGFTWNKGDDATNNILAFTRFGSDGSQMLCVFN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEE
LSGTSQPEYQLGVAAGGEWKLVLNTDDAEFLGAENDIATSVQAAATPRDNFAYSLSLHVP
CCCCCCCCEEEEEECCCEEEEEEECCCHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECC
AMSAQFYSLQK
CCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626