| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62390080
Identifier: 62390080
GI number: 62390080
Start: 1256202
End: 1258070
Strand: Reverse
Name: 62390080
Synonym: cg1347
Alternate gene names: NA
Gene position: 1258070-1256202 (Counterclockwise)
Preceding gene: 62390081
Following gene: 62390078
Centisome position: 38.32
GC content: 56.39
Gene sequence:
>1869_bases ATGCGCCCCTCTTCCCGGCCACTTGGCCTCGTCCTATGCACCGCACTGGCATCAACGATCATCACCGTTCCCGCAGCGTC CGCCCAGGAGCCAGCGCTTCTCGATGCCTCCGCCATCGCCCCACATACCGCCAGCTACGGCTACTACGTTGATGCATGGG ACACCAACGTTTCCACTGATCTGAATCCATCAAGTAATGCAGCTGTTGGCGTACTGGAGGAAATGCTTGAGCTGTGGACC CCAGGCGAAGAATGGAACACCGGCGTCAAGGTTGACCCCACCGTGCTGGATTCCAACATCGCACAGTCTGTGGCAATCTC CCAGCAGGCGACCGATGCTCAGCAAGAACGTGCTTGGGTTATTGATCGCCGCAACCAGAACTACACCGCAACCGACGGTC TTGGCGCATACGCAGATAGTTACCGCGAGACCGCACAGGTGGGCACCACCATCCCTGACGTTGTTCCAGCTGATGCCACC ACCGTGAAGTACAACGATGGCGGCAATGTGAATGGCAATTGGGCAGAGACCGGTGGAGAACTCGGATCCACTGTTGATCT AATTGAAGCTATCCGTCAGCATGCCGCAACCAGCAACAATGCCAAGGCGTACTACCAATACCCACGCCCCTACCGCTGGA CTGAATCCATCGAACCAGAAGCCTGGGGCGAGGGCGTTGACATGCCAGAGTATGCAAACCCACTGCGCAAGGATGAATCC GAAGCTGCCAGCGATGGCGGTTTCCCTTCCGGACACACCTCCGCAGGCGGCATGGCAACCAACGGCCTGGCTTACGCTTT CCCACAGCAATACGATAAACTGCTCATGACTGCAGCGGAAATCGGCGAAAGCCGCATCCAGCTGGGCATGCACTCTCCGC TTGATGTTATTGGCGGCCGTGTTCTATCCACCGCGATTACTGCAGGTGCACTTAATGATCCGAATCTCGACTCGGTGAAG GCTGAAGCCTTCGATGATGCTCAGGCATGGATCAGTAACCAGAGCGACATCACCACCAACACTCGCGATTTTGATGAGCA ACTCGCCGAGTACACCAACTTCCTCACCTTCGGCTTCGAGCAGTCCGGCGACACCACCCAAGACATGCGCGTGCCAAAGG GAGCTGAGGCTCTGCTGGAAACCCGCCTTCCGTACCTTGATGACGAACAGCGCCGTTGGGTTCTACATTCCACTGGCCTC GAGTCCGGTTTCCCAGTACTTGATGATGCCGAAGGTTGGGGCCGTCTCAACCTCTACGCTGCCCAGGCTGGCTACAGTGC ATTCGATACCAACGTTGACGTCACCATGAATGCCATCGACGGTGGCTACAACGCCAAAGACAACTGGCAAAACGACATCG AGGGCGCAGGATCCCTGACCAAGAACGGTTCCGGTGAACTCACCCTGTCAGGTGACAACTCCTACACCGGTGGAACCACC ATCACCGCGGGCACCTTGGTTGCTGCAACTGAGTCAGCTCTGGGAGCAGGCGATCTCACCATCAACGATGGTGCAACCTT GAAGATCACCCAGCCTGTCACCGTGGATGGAACCGCAAACCTGGGAGGAACTCTGCACGTTGCCCTTCCTGTTGGCACCA ACCACGTCACCGTGATCGATGCTGCATCAATTTCCGGTGAATTTGATGAGGTTATTGTTGATGGCGCAGTTGACGCTCAG GTGAGCTACGACAACGGCTCTGTCGTGATTACTACAGGCGCACCTTCTGATGACGTAAAGGAAACTGGCTCTTCTGCTGG CGGAATTCTTGCCATCGTGGCAGCCCTGGGTGGCATTGCAGCACTGATCTTCGGTGCATTCACCCAGTTTGGTTTCCCAC CAGCAATCAAGGAAATGTTCGACCTTTAA
Upstream 100 bases:
>100_bases TTCTCAAGGCTCCCTCTCCTTTAAGTTCGTGGCCCCAGCGCCAGCTTTTTTCATAAAAACTCAACAGGCACTGTGGGACC CCTTCACTTTGAAAGACATC
Downstream 100 bases:
>100_bases GCCTTCGCCAACCCCACGGCGTGCTTTATCGCCGTCGGGTTTTTGCGCGCCTAAACATTGTTGAAGTGGAGGGAGGCGTC GATAAGCAAAAATCTTTTAA
Product: phospholipid phosphatase
Products: NA
Alternate protein names: Serine Protease; Beta Strand Repeat-Containing Protein; Membrane-Associated Phospholipid Phosphatase; Autotransporter; Phosphoesterase PA-Phosphatase Related Protein; Phosphoesterase; Extracellular Serine Protease; Phosphatase Protein; Phosphoesterase PA-Phosphatase ; Outer Membrane Autotransporter Barrel; Outer Membrane Autotransporter Barrel Domain Protein; Secreted Protein; Autotransporter Serine Protease; Autotransporter Serine Protease Protein; Autotransporter Beta-Domain-Containing Protein; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; Acid Phosphatase; Autotransporter-Associated Beta Strand Repeat Protein; Phosphatase Domain-Containing Protein; Outer Membrane Autotransporter; PAP2 Superfamily Protein; Non-Specific Acid Phosphatase; Acid Phosphatase Autotransporter; Outer Membrane Autotransporter Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MRPSSRPLGLVLCTALASTIITVPAASAQEPALLDASAIAPHTASYGYYVDAWDTNVSTDLNPSSNAAVGVLEEMLELWT PGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWVIDRRNQNYTATDGLGAYADSYRETAQVGTTIPDVVPADAT TVKYNDGGNVNGNWAETGGELGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEAWGEGVDMPEYANPLRKDES EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDKLLMTAAEIGESRIQLGMHSPLDVIGGRVLSTAITAGALNDPNLDSVK AEAFDDAQAWISNQSDITTNTRDFDEQLAEYTNFLTFGFEQSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGL ESGFPVLDDAEGWGRLNLYAAQAGYSAFDTNVDVTMNAIDGGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ITAGTLVAATESALGAGDLTINDGATLKITQPVTVDGTANLGGTLHVALPVGTNHVTVIDAASISGEFDEVIVDGAVDAQ VSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIAALIFGAFTQFGFPPAIKEMFDL
Sequences:
>Translated_622_residues MRPSSRPLGLVLCTALASTIITVPAASAQEPALLDASAIAPHTASYGYYVDAWDTNVSTDLNPSSNAAVGVLEEMLELWT PGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWVIDRRNQNYTATDGLGAYADSYRETAQVGTTIPDVVPADAT TVKYNDGGNVNGNWAETGGELGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEAWGEGVDMPEYANPLRKDES EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDKLLMTAAEIGESRIQLGMHSPLDVIGGRVLSTAITAGALNDPNLDSVK AEAFDDAQAWISNQSDITTNTRDFDEQLAEYTNFLTFGFEQSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGL ESGFPVLDDAEGWGRLNLYAAQAGYSAFDTNVDVTMNAIDGGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ITAGTLVAATESALGAGDLTINDGATLKITQPVTVDGTANLGGTLHVALPVGTNHVTVIDAASISGEFDEVIVDGAVDAQ VSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIAALIFGAFTQFGFPPAIKEMFDL >Mature_622_residues MRPSSRPLGLVLCTALASTIITVPAASAQEPALLDASAIAPHTASYGYYVDAWDTNVSTDLNPSSNAAVGVLEEMLELWT PGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWVIDRRNQNYTATDGLGAYADSYRETAQVGTTIPDVVPADAT TVKYNDGGNVNGNWAETGGELGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEAWGEGVDMPEYANPLRKDES EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDKLLMTAAEIGESRIQLGMHSPLDVIGGRVLSTAITAGALNDPNLDSVK AEAFDDAQAWISNQSDITTNTRDFDEQLAEYTNFLTFGFEQSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGL ESGFPVLDDAEGWGRLNLYAAQAGYSAFDTNVDVTMNAIDGGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ITAGTLVAATESALGAGDLTINDGATLKITQPVTVDGTANLGGTLHVALPVGTNHVTVIDAASISGEFDEVIVDGAVDAQ VSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIAALIFGAFTQFGFPPAIKEMFDL
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65451; Mature: 65451
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSSRPLGLVLCTALASTIITVPAASAQEPALLDASAIAPHTASYGYYVDAWDTNVSTD CCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCEECHHHCCCCCCCCCEEEEEECCCCCCC LNPSSNAAVGVLEEMLELWTPGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHCHHHHHHHHHHHHHHHHHHHCEEE IDRRNQNYTATDGLGAYADSYRETAQVGTTIPDVVPADATTVKYNDGGNVNGNWAETGGE EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCC LGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEAWGEGVDMPEYANPLRKDES CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCH EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDKLLMTAAEIGESRIQLGMHSPLDVIGGR HHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCHHHEEECCCCCHHHHHHH VLSTAITAGALNDPNLDSVKAEAFDDAQAWISNQSDITTNTRDFDEQLAEYTNFLTFGFE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEECCC QSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGLESGFPVLDDAEGWGRLNLYA CCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE AQAGYSAFDTNVDVTMNAIDGGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ECCCCCEECCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCE ITAGTLVAATESALGAGDLTINDGATLKITQPVTVDGTANLGGTLHVALPVGTNHVTVID EECCEEEEEHHHCCCCCCEEECCCCEEEEECCEEECCCCCCCCEEEEEEECCCCEEEEEE AASISGEFDEVIVDGAVDAQVSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIA ECCCCCCCHHEEECCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH ALIFGAFTQFGFPPAIKEMFDL HHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MRPSSRPLGLVLCTALASTIITVPAASAQEPALLDASAIAPHTASYGYYVDAWDTNVSTD CCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCEECHHHCCCCCCCCCEEEEEECCCCCCC LNPSSNAAVGVLEEMLELWTPGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHCHHHHHHHHHHHHHHHHHHHCEEE IDRRNQNYTATDGLGAYADSYRETAQVGTTIPDVVPADATTVKYNDGGNVNGNWAETGGE EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCC LGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEAWGEGVDMPEYANPLRKDES CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCH EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDKLLMTAAEIGESRIQLGMHSPLDVIGGR HHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCHHHEEECCCCCHHHHHHH VLSTAITAGALNDPNLDSVKAEAFDDAQAWISNQSDITTNTRDFDEQLAEYTNFLTFGFE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEECCC QSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGLESGFPVLDDAEGWGRLNLYA CCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE AQAGYSAFDTNVDVTMNAIDGGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ECCCCCEECCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCE ITAGTLVAATESALGAGDLTINDGATLKITQPVTVDGTANLGGTLHVALPVGTNHVTVID EECCEEEEEHHHCCCCCCEEECCCCEEEEECCEEECCCCCCCCEEEEEEECCCCEEEEEE AASISGEFDEVIVDGAVDAQVSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIA ECCCCCCCHHEEECCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH ALIFGAFTQFGFPPAIKEMFDL HHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA