| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is putP [H]
Identifier: 62390051
GI number: 62390051
Start: 1219496
End: 1221070
Strand: Reverse
Name: putP [H]
Synonym: cg1314
Alternate gene names: 62390051
Gene position: 1221070-1219496 (Counterclockwise)
Preceding gene: 62390058
Following gene: 62390050
Centisome position: 37.2
GC content: 50.67
Gene sequence:
>1575_bases ATGAGCGATAACACCTGGTTCATCATAGCCATCGTTATCTATATGTTGGTGATGGTGCTCATCGGCTATTGGAGTTACCG CAAGACAGAAAAATACGACGACTACATGCTCGCCGGCCGCGGGCTCAACCCTTTTGTTGCCGCAATGTCCGCAGGTGCCT CAGATATGTCAGGTTGGCTGCTCATGGGTCTGCCCGGCGCGCTGTTTGTCACCGGCATGTCCGAGTTGTGGATCGCAGTC GGACTCACCATTGGTGCATGGGCGAACTGGATGTGGGTGGCACCTCGTCTTCGTTCTTATTCCGAAATCTCGGCCAACTC AATCACCCTGCCTTCATTCTTTGAGAACCGACTTCGCGATAAATCTCGCGCGCTTCGCATCATTGCAGCACTAATTATCA TTGTGTTCTTCACCTTCTACATTTCTTCAGGCATGGTTGCTGGTGGAGTGTATTGGGAGTCCACGTTTGGTGGAGATTAT CTACTCGGTATGGCCATTGTCGCAGGTGTGACAGTGCTGTATACCTTCATTGGAGGATTCCTTGCTGTGTCTTATACAGA CGCAGTTCAGGGGACTATCATGTTCTTCTCGTTGATCATCGTGCCAGTCATGGCATATTTCGCACTGGCGAACCCCATGG ATATTTGGAGCTTTGCAAACTCTAATGATTACGGCCCGCACACCGATGGAATTGGCAATCCCACCTACTTCTCCATGATC AGTGGCATTTCTGCAGCAGCAATCATTGGTAACTTAGGTTGGGGTCTTGGATACTTCGGCCAGCCACACATTGTGGTTCG TTTCATGGCACTTCGCACACCAGCTGAAGCAAAGCAAGGTCGTCGCATCGGTATTTCCTGGATGATAATCTGCCTGATTG GTGCAACCTTTACCGCAATTATCTCCACAGTTTTCTTTGCACAAAACCCCGACGCCAACATCACTGACACAAGGGCTTAT GAGTCCATCTTCCTAGATCTTGCCCGGATGCTGTTCCACCCATTGATCGCTGGACTTATTCTGACTGCTGTTCTCGCGGC CATCATGTCTACCATGTCGTCACAGCTGCTGGTCACCGCATCTTCCCTGATTGAGGACCTGCTGAAGGTAGTTAAAAAGG ACTCGCTGAGCGAACGCACCCTGATCATGCTGTCTCGTGCCACAGTCATCATTCTGGCGATCATTGCAGCAGCCATGGCT ATTAACCCGTCTGATTCCATCCTCGGATTGGTGGGATTTGCGTGGGCAGGATTCGGCTCTGCATTTGGTCCGATCATACT TGCTAGCCTTTATTGGAAGCGTCTCAACGCCGCCGGCGCTATCTCCGGCATGATTACTGGTGCTATTGTCTCCATCGCGT GGGGTATGTCCCCACTAAGCGATACGTTGTATGAAATCATCCCAGGTTTCGCCTTGGCAACCATCGTGATGGTCGTTGTT TCCCTCCTGACAAAGGAACCCTCCGAAGAAATCCTCAACGAGTTTGAAACCGCCAAGGATCTTGCTGCCGCTGTGGAATC AAACGAGGATGTTGATTTCGCTGACGCAGCTCAGAAGCTTTCGAAAGAAAGTTAA
Upstream 100 bases:
>100_bases GTATATTCAGACACCCACGTCGATTAGTGTTGTAGTTCACAGTGCTTATTTTTTATTTGTATCTTTGCACGTTTGTCCCC TACCCAAAAGGAGAAACCTC
Downstream 100 bases:
>100_bases GCCTTAGAGGGAACCAAACGCCAAGGCGATGAGTCTAACCCGAGTATGAAGAACTTTATTCGGGTACTCATCGCCTTTAG TGTTTTCCTCTGTATATATA
Product: proline transport system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MSDNTWFIIAIVIYMLVMVLIGYWSYRKTEKYDDYMLAGRGLNPFVAAMSAGASDMSGWLLMGLPGALFVTGMSELWIAV GLTIGAWANWMWVAPRLRSYSEISANSITLPSFFENRLRDKSRALRIIAALIIIVFFTFYISSGMVAGGVYWESTFGGDY LLGMAIVAGVTVLYTFIGGFLAVSYTDAVQGTIMFFSLIIVPVMAYFALANPMDIWSFANSNDYGPHTDGIGNPTYFSMI SGISAAAIIGNLGWGLGYFGQPHIVVRFMALRTPAEAKQGRRIGISWMIICLIGATFTAIISTVFFAQNPDANITDTRAY ESIFLDLARMLFHPLIAGLILTAVLAAIMSTMSSQLLVTASSLIEDLLKVVKKDSLSERTLIMLSRATVIILAIIAAAMA INPSDSILGLVGFAWAGFGSAFGPIILASLYWKRLNAAGAISGMITGAIVSIAWGMSPLSDTLYEIIPGFALATIVMVVV SLLTKEPSEEILNEFETAKDLAAAVESNEDVDFADAAQKLSKES
Sequences:
>Translated_524_residues MSDNTWFIIAIVIYMLVMVLIGYWSYRKTEKYDDYMLAGRGLNPFVAAMSAGASDMSGWLLMGLPGALFVTGMSELWIAV GLTIGAWANWMWVAPRLRSYSEISANSITLPSFFENRLRDKSRALRIIAALIIIVFFTFYISSGMVAGGVYWESTFGGDY LLGMAIVAGVTVLYTFIGGFLAVSYTDAVQGTIMFFSLIIVPVMAYFALANPMDIWSFANSNDYGPHTDGIGNPTYFSMI SGISAAAIIGNLGWGLGYFGQPHIVVRFMALRTPAEAKQGRRIGISWMIICLIGATFTAIISTVFFAQNPDANITDTRAY ESIFLDLARMLFHPLIAGLILTAVLAAIMSTMSSQLLVTASSLIEDLLKVVKKDSLSERTLIMLSRATVIILAIIAAAMA INPSDSILGLVGFAWAGFGSAFGPIILASLYWKRLNAAGAISGMITGAIVSIAWGMSPLSDTLYEIIPGFALATIVMVVV SLLTKEPSEEILNEFETAKDLAAAVESNEDVDFADAAQKLSKES >Mature_523_residues SDNTWFIIAIVIYMLVMVLIGYWSYRKTEKYDDYMLAGRGLNPFVAAMSAGASDMSGWLLMGLPGALFVTGMSELWIAVG LTIGAWANWMWVAPRLRSYSEISANSITLPSFFENRLRDKSRALRIIAALIIIVFFTFYISSGMVAGGVYWESTFGGDYL LGMAIVAGVTVLYTFIGGFLAVSYTDAVQGTIMFFSLIIVPVMAYFALANPMDIWSFANSNDYGPHTDGIGNPTYFSMIS GISAAAIIGNLGWGLGYFGQPHIVVRFMALRTPAEAKQGRRIGISWMIICLIGATFTAIISTVFFAQNPDANITDTRAYE SIFLDLARMLFHPLIAGLILTAVLAAIMSTMSSQLLVTASSLIEDLLKVVKKDSLSERTLIMLSRATVIILAIIAAAMAI NPSDSILGLVGFAWAGFGSAFGPIILASLYWKRLNAAGAISGMITGAIVSIAWGMSPLSDTLYEIIPGFALATIVMVVVS LLTKEPSEEILNEFETAKDLAAAVESNEDVDFADAAQKLSKES
Specific function: Catalyzes the sodium-dependent uptake of extracellular amino acids [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=504, Percent_Identity=46.2301587301587, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI109659836, Length=565, Percent_Identity=23.8938053097345, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI109659839, Length=583, Percent_Identity=23.156089193825, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI110835708, Length=594, Percent_Identity=22.7272727272727, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4507035, Length=408, Percent_Identity=23.0392156862745, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI4507031, Length=590, Percent_Identity=22.2033898305085, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI14140236, Length=588, Percent_Identity=24.1496598639456, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1787251, Length=498, Percent_Identity=47.3895582329317, Blast_Score=442, Evalue=1e-125, Organism=Escherichia coli, GI1790503, Length=456, Percent_Identity=25.4385964912281, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI87082237, Length=461, Percent_Identity=26.2472885032538, Blast_Score=109, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17539284, Length=475, Percent_Identity=25.2631578947368, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI221459584, Length=390, Percent_Identity=23.8461538461538, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24640370, Length=429, Percent_Identity=22.8438228438228, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 56648; Mature: 56517
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNTWFIIAIVIYMLVMVLIGYWSYRKTEKYDDYMLAGRGLNPFVAAMSAGASDMSGWL CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCEE LMGLPGALFVTGMSELWIAVGLTIGAWANWMWVAPRLRSYSEISANSITLPSFFENRLRD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHCCCCCCCCHHHHHHHHHH KSRALRIIAALIIIVFFTFYISSGMVAGGVYWESTFGGDYLLGMAIVAGVTVLYTFIGGF HHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH LAVSYTDAVQGTIMFFSLIIVPVMAYFALANPMDIWSFANSNDYGPHTDGIGNPTYFSMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHH SGISAAAIIGNLGWGLGYFGQPHIVVRFMALRTPAEAKQGRRIGISWMIICLIGATFTAI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH ISTVFFAQNPDANITDTRAYESIFLDLARMLFHPLIAGLILTAVLAAIMSTMSSQLLVTA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIEDLLKVVKKDSLSERTLIMLSRATVIILAIIAAAMAINPSDSILGLVGFAWAGFGS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH AFGPIILASLYWKRLNAAGAISGMITGAIVSIAWGMSPLSDTLYEIIPGFALATIVMVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHH SLLTKEPSEEILNEFETAKDLAAAVESNEDVDFADAAQKLSKES HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SDNTWFIIAIVIYMLVMVLIGYWSYRKTEKYDDYMLAGRGLNPFVAAMSAGASDMSGWL CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCEE LMGLPGALFVTGMSELWIAVGLTIGAWANWMWVAPRLRSYSEISANSITLPSFFENRLRD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHCCCCCCCCHHHHHHHHHH KSRALRIIAALIIIVFFTFYISSGMVAGGVYWESTFGGDYLLGMAIVAGVTVLYTFIGGF HHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH LAVSYTDAVQGTIMFFSLIIVPVMAYFALANPMDIWSFANSNDYGPHTDGIGNPTYFSMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHH SGISAAAIIGNLGWGLGYFGQPHIVVRFMALRTPAEAKQGRRIGISWMIICLIGATFTAI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH ISTVFFAQNPDANITDTRAYESIFLDLARMLFHPLIAGLILTAVLAAIMSTMSSQLLVTA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIEDLLKVVKKDSLSERTLIMLSRATVIILAIIAAAMAINPSDSILGLVGFAWAGFGS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH AFGPIILASLYWKRLNAAGAISGMITGAIVSIAWGMSPLSDTLYEIIPGFALATIVMVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHH SLLTKEPSEEILNEFETAKDLAAAVESNEDVDFADAAQKLSKES HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]