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The map label for this gene is yxaD [H]

Identifier: 62389953

GI number: 62389953

Start: 1113950

End: 1114426

Strand: Reverse

Name: yxaD [H]

Synonym: cg1211

Alternate gene names: 62389953

Gene position: 1114426-1113950 (Counterclockwise)

Preceding gene: 62389956

Following gene: 62389952

Centisome position: 33.95

GC content: 50.52

Gene sequence:

>477_bases
GTGTCTACAGATCCAGAAGAGTTCGACCAAGCTGAAACCCTCGATCAACTCGCGTATGAGATCATCCTGCTCACCCGGTA
TGGTGTCCAAAACACACCGACCAACAAGCGCGAAGCCATCATGGATCGCAGCGCCCTCATCTTGCTCACCCGCCTTGACG
CTCAAGGACCTATGACAGTTAATGAGCTAGCTGAAAGCTTTGGACTTAACGTTTCTACCGTGCACCGCCAACTCAAAGCA
GCCATTGCCAATGGCTTAATTGAAGTCGTCGATGATCAAGCATGCCCCGCTAAACTTCATCGTCCAACTGAGTTGGGTAA
AGAAAAACTGCAGCAGGAGCTTCTTGCCCGCCAGCAGGATCTCACCCGCATTCTTCATGATTGGGATGAGGAAGACATTA
AAACGCATGCCAAGCTATTGCGGAAGCACAATGAAAGCTTGGAAGAATACCTCGATATGAAGTGGCCCCGCCCCTAA

Upstream 100 bases:

>100_bases
TGAACACAAACTACCACGTTTATTGCATCATGCAACACCCTTGCTAGGATATAAAATACTCTATGAGTCCAGACGTTTTT
AAAGGGAGCGAATTACCATA

Downstream 100 bases:

>100_bases
GTGCCCATAAACGCACCTCTAAAACCATATCCACAGAATTTATTTCTGTGGATCACTTCCCCACTTCACAGCCTAATGAT
ATAAAAGATCTAGCATTAAA

Product: MARR-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSTDPEEFDQAETLDQLAYEIILLTRYGVQNTPTNKREAIMDRSALILLTRLDAQGPMTVNELAESFGLNVSTVHRQLKA
AIANGLIEVVDDQACPAKLHRPTELGKEKLQQELLARQQDLTRILHDWDEEDIKTHAKLLRKHNESLEEYLDMKWPRP

Sequences:

>Translated_158_residues
MSTDPEEFDQAETLDQLAYEIILLTRYGVQNTPTNKREAIMDRSALILLTRLDAQGPMTVNELAESFGLNVSTVHRQLKA
AIANGLIEVVDDQACPAKLHRPTELGKEKLQQELLARQQDLTRILHDWDEEDIKTHAKLLRKHNESLEEYLDMKWPRP
>Mature_157_residues
STDPEEFDQAETLDQLAYEIILLTRYGVQNTPTNKREAIMDRSALILLTRLDAQGPMTVNELAESFGLNVSTVHRQLKAA
IANGLIEVVDDQACPAKLHRPTELGKEKLQQELLARQQDLTRILHDWDEEDIKTHAKLLRKHNESLEEYLDMKWPRP

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18156; Mature: 18025

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDPEEFDQAETLDQLAYEIILLTRYGVQNTPTNKREAIMDRSALILLTRLDAQGPMTV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
NELAESFGLNVSTVHRQLKAAIANGLIEVVDDQACPAKLHRPTELGKEKLQQELLARQQD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
LTRILHDWDEEDIKTHAKLLRKHNESLEEYLDMKWPRP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STDPEEFDQAETLDQLAYEIILLTRYGVQNTPTNKREAIMDRSALILLTRLDAQGPMTV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
NELAESFGLNVSTVHRQLKAAIANGLIEVVDDQACPAKLHRPTELGKEKLQQELLARQQD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
LTRILHDWDEEDIKTHAKLLRKHNESLEEYLDMKWPRP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]