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The map label for this gene is yprA [H]

Identifier: 62389204

GI number: 62389204

Start: 319333

End: 321729

Strand: Reverse

Name: yprA [H]

Synonym: cg0370

Alternate gene names: 62389204

Gene position: 321729-319333 (Counterclockwise)

Preceding gene: 62389206

Following gene: 62389196

Centisome position: 9.8

GC content: 57.53

Gene sequence:

>2397_bases
TTGACTACCCCCGATTTTGAGAGTGAAAAGACTCAAGCTATGAGGCCCAGCTTTGGTGAAGAGCTGGCCGCAATCGTTTC
CAAACGTTACTCCGAATCGACGCTCACTCATATGGTGACGTTGCCCGCATCGAAAGCTAAATACGTCGATTGGCCGAGTT
GGGTACCTGCTAGCCTGCGCGATGCGTTGGTGAATCGTGGTATCAATAAGCTCTTTTCCCACCAGGAGCAGACCGCACAT
CTGGCGTGGAATGGCCAGCATGTGGTGGTTGCCACCGGTACATCTTCGGGAAAATCTTTGGGTTATCAGCTGCCCATTTT
GTCAGCGCTCGGCACGGATCCTACCGCCTGTGCGTTGTATCTAACTCCCACCAAGGCTTTGGGATCTGATCAGCTAACCT
CCACGTCCACGTTGCTGCGCGACATTCCGGATTTCCACCCGATTAATCCGGCGCCCTACGATGGCGATACCCCCTCCGAG
GCGCGGTCCGGCATCCGCGATTTGAGTCGTTTTGTGTTCACCAATCCGGATATGGTGCATGCGTCGATGCTGGCGAATCA
TCCCCGCTGGGCCAGGTTGTTGCGCCATTTGAAGTTCATCGTGATTGATGAATGCCATGCCTACCGTGGTGTGTTTGGCG
CGAACGTGTCGATGGTGCTTCGTCGTCTACTGCGCATCGCCGCGTTTTATGGATCCCACCCGACGGTCATTTTGGCGTCC
GCGACCAGCTCCGATCCGGAAATTCATGCTTCCAGATTGTTGGGCGCGCCGGTTAAAGCAGTGACGGAAGATGGCGCCCC
GACGGGTGAACGCACCGTTTTGCTGTGGGAGCCCGGTTTCATCGAAGGCGCCGAGGGCGAGAACGGCGCGCCGGTGCGTC
GCGCAGCCAGCACCGAAGCAGCAAACATTATGGCCACGCTCATTTCCGAGGGTGCACGCACGTTGACGTTCGTCCGTTCA
CGTCGACAAGCAGAAATCGTTGCCCTGCGCGCGCAGGAAGAGCTCAGCACGCTGGGCCGCCCCGATTTCGCCCGGCGCGT
CGCGTCCTACCGGGCGGGGTACTTGGCGGAGGACCGCCGTAGGTTGGAGAGATTGCTTGACGACGGCACCCTCCTCGGTG
TTGCTTCCACCAATGCGCTTGAACTGGGCATTGATGTCGGTGGACTGGATGCTGTGGTCACGGCTGGTTTTCCAGGAACT
GTGGCGTCGTTTTGGCAGCAGGCGGGGCGAGCTGGTCGGCGTGGGCAGGGTTCGTTGGTGGTGCTTGTTGCTCGTGATGA
GCCGATGGATACGTATTTGGTGCATCATCCGGCAGCCCTGTTGGAGAAGCCGGTTGAGGCTGCGGTGTTTGATCCGACGA
ATCCGCATGTTATTCGGGGTCATGTTTATTGCGCTGCGGTGGAAAAGCCTCTGACAGAGGCGGAGGTCGCGGCGTTTGGT
GCCCAAAAGGTGGTGGAGAAGCTCGAGATTGAAGGGCTGTTGCGCAAGCGTCCGCGTGGCTGGTTTGCGGTGGAAAAGCC
CATGTCAGAGGATCCGGATGAGCTGAGTCCTGATTCGGCACACCAGCAGGTGAGTTTGCGTGGTGGGTCTGGTTCGGAGT
TCATGATTGTTGATATCACTGACGGCCGGTTGTTAGGCACCATCGATTCCGCGAAGGCGATGTCGCAGACTCATCCCGGC
GCGGTGTATCTCCACCAGGGTGAATCCTTTGTCATTGATGAGTTGGATTTGGAGGAGAATCTGGCACTGGCCAGGCCTGA
GCTGCCTGATTACACCACCTATGCCAGAAGTGACACGGACATCAGGATTACCTCTGCCCCGTTGGAGGACGAGGTTTTTG
ATGCTGGTGGTGGTTTGTGGGTCGCCAACGTAGAGGTGCAGGTCACCGACCGTGTGACTGGCTATGTCACCCGCCTTAGT
GATGGCACCACGTTGGATGCGACTCCGTTGTATCTTCCTCCTCAAATTCTTCAGACTCGTGCGGTGGCGTACACGATTGA
TCCGTTGGCGTTGGAAGCGATGGGCATTCCCGCCGCTGATATTCCCGGTGCTCTTCACGCAGCGGAGCATGCGGCGATTG
GTATGTTGCCGCTGCTTGCGACGTGTGATCGTTGGGATATCGGCGGCGTATCCACGGCACTTCATGCGGATACGGGCTAC
CCCACTGTGTTTGTCTATGACGGTATGGACGGCGGAGCTGGTTTTGCGGATACTGGTTTTCGACGTTTCGCCCAGTGGAT
TGAGGCCACATTTGAGGTCGTCCGCAGCTGTAGCTGTGAATCTGGGTGCCCGAGCTGTGTGCAGTCCCCGAAATGCGGCA
ATGGAAACAATCCGTTGGATAAGGCAGGTGCCATCAAGTTACTGGGTGCGATGGTGACCTTGTTGGGAACCTCATAA

Upstream 100 bases:

>100_bases
GTCTTTCACGTTTAAAGCCCAAGCGATAGTCTATTAGGATTAGTTTTACGTTTTGGCAGGTCAGTCCCATTTATACAGCC
CAGCGAAAGGGGGTAAATTC

Downstream 100 bases:

>100_bases
AGGTCCTGCTTTTGCGTGGGCTTCTTGTCCACGAACGGTGACGGTGAGCGTGAGATCCTCCCCTTCTGTTGCGCAGTTTT
CTAGTTGTGCGTTGTTTGCT

Product: DEAD/DEAH box helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 798; Mature: 797

Protein sequence:

>798_residues
MTTPDFESEKTQAMRPSFGEELAAIVSKRYSESTLTHMVTLPASKAKYVDWPSWVPASLRDALVNRGINKLFSHQEQTAH
LAWNGQHVVVATGTSSGKSLGYQLPILSALGTDPTACALYLTPTKALGSDQLTSTSTLLRDIPDFHPINPAPYDGDTPSE
ARSGIRDLSRFVFTNPDMVHASMLANHPRWARLLRHLKFIVIDECHAYRGVFGANVSMVLRRLLRIAAFYGSHPTVILAS
ATSSDPEIHASRLLGAPVKAVTEDGAPTGERTVLLWEPGFIEGAEGENGAPVRRAASTEAANIMATLISEGARTLTFVRS
RRQAEIVALRAQEELSTLGRPDFARRVASYRAGYLAEDRRRLERLLDDGTLLGVASTNALELGIDVGGLDAVVTAGFPGT
VASFWQQAGRAGRRGQGSLVVLVARDEPMDTYLVHHPAALLEKPVEAAVFDPTNPHVIRGHVYCAAVEKPLTEAEVAAFG
AQKVVEKLEIEGLLRKRPRGWFAVEKPMSEDPDELSPDSAHQQVSLRGGSGSEFMIVDITDGRLLGTIDSAKAMSQTHPG
AVYLHQGESFVIDELDLEENLALARPELPDYTTYARSDTDIRITSAPLEDEVFDAGGGLWVANVEVQVTDRVTGYVTRLS
DGTTLDATPLYLPPQILQTRAVAYTIDPLALEAMGIPAADIPGALHAAEHAAIGMLPLLATCDRWDIGGVSTALHADTGY
PTVFVYDGMDGGAGFADTGFRRFAQWIEATFEVVRSCSCESGCPSCVQSPKCGNGNNPLDKAGAIKLLGAMVTLLGTS

Sequences:

>Translated_798_residues
MTTPDFESEKTQAMRPSFGEELAAIVSKRYSESTLTHMVTLPASKAKYVDWPSWVPASLRDALVNRGINKLFSHQEQTAH
LAWNGQHVVVATGTSSGKSLGYQLPILSALGTDPTACALYLTPTKALGSDQLTSTSTLLRDIPDFHPINPAPYDGDTPSE
ARSGIRDLSRFVFTNPDMVHASMLANHPRWARLLRHLKFIVIDECHAYRGVFGANVSMVLRRLLRIAAFYGSHPTVILAS
ATSSDPEIHASRLLGAPVKAVTEDGAPTGERTVLLWEPGFIEGAEGENGAPVRRAASTEAANIMATLISEGARTLTFVRS
RRQAEIVALRAQEELSTLGRPDFARRVASYRAGYLAEDRRRLERLLDDGTLLGVASTNALELGIDVGGLDAVVTAGFPGT
VASFWQQAGRAGRRGQGSLVVLVARDEPMDTYLVHHPAALLEKPVEAAVFDPTNPHVIRGHVYCAAVEKPLTEAEVAAFG
AQKVVEKLEIEGLLRKRPRGWFAVEKPMSEDPDELSPDSAHQQVSLRGGSGSEFMIVDITDGRLLGTIDSAKAMSQTHPG
AVYLHQGESFVIDELDLEENLALARPELPDYTTYARSDTDIRITSAPLEDEVFDAGGGLWVANVEVQVTDRVTGYVTRLS
DGTTLDATPLYLPPQILQTRAVAYTIDPLALEAMGIPAADIPGALHAAEHAAIGMLPLLATCDRWDIGGVSTALHADTGY
PTVFVYDGMDGGAGFADTGFRRFAQWIEATFEVVRSCSCESGCPSCVQSPKCGNGNNPLDKAGAIKLLGAMVTLLGTS
>Mature_797_residues
TTPDFESEKTQAMRPSFGEELAAIVSKRYSESTLTHMVTLPASKAKYVDWPSWVPASLRDALVNRGINKLFSHQEQTAHL
AWNGQHVVVATGTSSGKSLGYQLPILSALGTDPTACALYLTPTKALGSDQLTSTSTLLRDIPDFHPINPAPYDGDTPSEA
RSGIRDLSRFVFTNPDMVHASMLANHPRWARLLRHLKFIVIDECHAYRGVFGANVSMVLRRLLRIAAFYGSHPTVILASA
TSSDPEIHASRLLGAPVKAVTEDGAPTGERTVLLWEPGFIEGAEGENGAPVRRAASTEAANIMATLISEGARTLTFVRSR
RQAEIVALRAQEELSTLGRPDFARRVASYRAGYLAEDRRRLERLLDDGTLLGVASTNALELGIDVGGLDAVVTAGFPGTV
ASFWQQAGRAGRRGQGSLVVLVARDEPMDTYLVHHPAALLEKPVEAAVFDPTNPHVIRGHVYCAAVEKPLTEAEVAAFGA
QKVVEKLEIEGLLRKRPRGWFAVEKPMSEDPDELSPDSAHQQVSLRGGSGSEFMIVDITDGRLLGTIDSAKAMSQTHPGA
VYLHQGESFVIDELDLEENLALARPELPDYTTYARSDTDIRITSAPLEDEVFDAGGGLWVANVEVQVTDRVTGYVTRLSD
GTTLDATPLYLPPQILQTRAVAYTIDPLALEAMGIPAADIPGALHAAEHAAIGMLPLLATCDRWDIGGVSTALHADTGYP
TVFVYDGMDGGAGFADTGFRRFAQWIEATFEVVRSCSCESGCPSCVQSPKCGNGNNPLDKAGAIKLLGAMVTLLGTS

Specific function: Unknown

COG id: COG1205

COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=410, Percent_Identity=27.3170731707317, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320497, Length=818, Percent_Identity=32.2738386308068, Blast_Score=433, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR018973
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021 [H]

Pfam domain/function: PF00270 DEAD; PF09369 DUF1998; PF00271 Helicase_C [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 85826; Mature: 85695

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPDFESEKTQAMRPSFGEELAAIVSKRYSESTLTHMVTLPASKAKYVDWPSWVPASLR
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCHHHH
DALVNRGINKLFSHQEQTAHLAWNGQHVVVATGTSSGKSLGYQLPILSALGTDPTACALY
HHHHHHCHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCEECCHHHHHCCCCCEEEEE
LTPTKALGSDQLTSTSTLLRDIPDFHPINPAPYDGDTPSEARSGIRDLSRFVFTNPDMVH
ECCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
ASMLANHPRWARLLRHLKFIVIDECHAYRGVFGANVSMVLRRLLRIAAFYGSHPTVILAS
HHHHHCCHHHHHHHHHHHEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
ATSSDPEIHASRLLGAPVKAVTEDGAPTGERTVLLWEPGFIEGAEGENGAPVRRAASTEA
CCCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCCCCHHHCCHHH
ANIMATLISEGARTLTFVRSRRQAEIVALRAQEELSTLGRPDFARRVASYRAGYLAEDRR
HHHHHHHHHCCCHHHHHHHHCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCHHHHHH
RLERLLDDGTLLGVASTNALELGIDVGGLDAVVTAGFPGTVASFWQQAGRAGRRGQGSLV
HHHHHHCCCCEEEEECCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEE
VLVARDEPMDTYLVHHPAALLEKPVEAAVFDPTNPHVIRGHVYCAAVEKPLTEAEVAAFG
EEEECCCCCCCEEEECCHHHHCCCCHHEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHH
AQKVVEKLEIEGLLRKRPRGWFAVEKPMSEDPDELSPDSAHQQVSLRGGSGSEFMIVDIT
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC
DGRLLGTIDSAKAMSQTHPGAVYLHQGESFVIDELDLEENLALARPELPDYTTYARSDTD
CCEEEECCHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCEECCCCCCCCCEECCCCCC
IRITSAPLEDEVFDAGGGLWVANVEVQVTDRVTGYVTRLSDGTTLDATPLYLPPQILQTR
EEEECCCCCHHHHHCCCCEEEEEEEEEEECCCEEEEEECCCCCEECCCCCCCCHHHHHCC
AVAYTIDPLALEAMGIPAADIPGALHAAEHAAIGMLPLLATCDRWDIGGVSTALHADTGY
CEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
PTVFVYDGMDGGAGFADTGFRRFAQWIEATFEVVRSCSCESGCPSCVQSPKCGNGNNPLD
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC
KAGAIKLLGAMVTLLGTS
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTPDFESEKTQAMRPSFGEELAAIVSKRYSESTLTHMVTLPASKAKYVDWPSWVPASLR
CCCCCCCCHHHHCCCCHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCHHHH
DALVNRGINKLFSHQEQTAHLAWNGQHVVVATGTSSGKSLGYQLPILSALGTDPTACALY
HHHHHHCHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCEECCHHHHHCCCCCEEEEE
LTPTKALGSDQLTSTSTLLRDIPDFHPINPAPYDGDTPSEARSGIRDLSRFVFTNPDMVH
ECCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
ASMLANHPRWARLLRHLKFIVIDECHAYRGVFGANVSMVLRRLLRIAAFYGSHPTVILAS
HHHHHCCHHHHHHHHHHHEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
ATSSDPEIHASRLLGAPVKAVTEDGAPTGERTVLLWEPGFIEGAEGENGAPVRRAASTEA
CCCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCCCCHHHCCHHH
ANIMATLISEGARTLTFVRSRRQAEIVALRAQEELSTLGRPDFARRVASYRAGYLAEDRR
HHHHHHHHHCCCHHHHHHHHCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCHHHHHH
RLERLLDDGTLLGVASTNALELGIDVGGLDAVVTAGFPGTVASFWQQAGRAGRRGQGSLV
HHHHHHCCCCEEEEECCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEE
VLVARDEPMDTYLVHHPAALLEKPVEAAVFDPTNPHVIRGHVYCAAVEKPLTEAEVAAFG
EEEECCCCCCCEEEECCHHHHCCCCHHEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHH
AQKVVEKLEIEGLLRKRPRGWFAVEKPMSEDPDELSPDSAHQQVSLRGGSGSEFMIVDIT
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC
DGRLLGTIDSAKAMSQTHPGAVYLHQGESFVIDELDLEENLALARPELPDYTTYARSDTD
CCEEEECCHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCEECCCCCCCCCEECCCCCC
IRITSAPLEDEVFDAGGGLWVANVEVQVTDRVTGYVTRLSDGTTLDATPLYLPPQILQTR
EEEECCCCCHHHHHCCCCEEEEEEEEEEECCCEEEEEECCCCCEECCCCCCCCHHHHHCC
AVAYTIDPLALEAMGIPAADIPGALHAAEHAAIGMLPLLATCDRWDIGGVSTALHADTGY
CEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
PTVFVYDGMDGGAGFADTGFRRFAQWIEATFEVVRSCSCESGCPSCVQSPKCGNGNNPLD
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC
KAGAIKLLGAMVTLLGTS
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]