Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
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Accession | NC_006958 |
Length | 3,282,708 |
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The map label for this gene is 62388987
Identifier: 62388987
GI number: 62388987
Start: 97317
End: 98471
Strand: Reverse
Name: 62388987
Synonym: cg0121
Alternate gene names: NA
Gene position: 98471-97317 (Counterclockwise)
Preceding gene: 62388988
Following gene: 62388986
Centisome position: 3.0
GC content: 57.84
Gene sequence:
>1155_bases ATGAGATCAGGAAACGCCAATCGCGTCTTCATAGGTGTTACCATCCTGCTGTTTACTGCAGGATGGGCAGCCAATCATTT CGCGTCAGTGTTGGTGTTGATCCGTGAACAATTAGACGTATCAAGCGTGCTGGTCAACGGCGCTTTTGGTATTTATGCAC TGGGACTTCTTCCAAGTTTGCTCGCAGGCGGTGTGCTTGCCGACCGTTTTGGTGCCCGCATGGTGGTACTCACCGGAGGT GTACTTTCTGCGCTTGGAAACCTTTCTCTTTTAGCGTTTCATGATGGTCCTTCCCTCCTGGTAGGACGATTCATCGTTGG TCTGGGCGTTGGATTAGTCGTCAGCGCGGGCACCGCATGGGCGGGCAGATTGCGCGGAGCAAGCGGCGTGACATTGGCCG GCATTATTCTGACCGCCGGTTTCATGATGGGGCCGATTGTGACAAGTGGGTTGGGGATGGCGTCGACAAGCATTATTACG CCCTTTGCCATAAGCGTTGCCCTCTCGCTGATCGCGGTGGTTGTGGGATTTGCGCTTGGCGATGCCCGCAGCACCCCGAG CGCACTTGGCGCATCCAGCGGAATCAAACACGAACGAAGCATGAAAAAGGCCCTCGCGGTGTCCTTGCCGATGGCAATTT GGGTGTTCAGCTGCATCACCACCTCCCTGATCGTGATGTCCGCGCGCATCGACTCCACCTTCGGCAACGCCATTCTTCTC CCCGGAATCGGCGCGGCGATCGCCTTCAGCGCAGGCCTGATCGCACAATTTTTAGGTAGGAAATTCGCGTGGGGTCGTGG CTCCGGAATCGTGGGCGCGCTGTGTGCCCTCGCGGGTTTTGCGCTGGCAGCTTTTGGTGGCGACTCCATTCCAGTGTGGC TTTTCGTTATCGCCTCGATCCTGTTCGGCACCGCATATGGCCTCTGCCTGCGCGAAGGCCTCCTCAGCATCGAAACTTAC ACGCCACTCAACCGACGTGGCACCGGCATCGGCATCTATTATGTGTTCACGTATTTGGGATTCGGGCTGCCAGTGCTTCT CGACGCCCTCCTCCCGCACCTTGGCGCCTCCATTCCGCTGTACGCGCTGGCGGCGCTCGCCCTTGGCTCCGCAGTAATCC GCGGCGTACAAATCAAGCGCGGGTATGTGGTTTAG
Upstream 100 bases:
>100_bases ACACTCCTTTGGTCACCTGGTTTGGTTGAGGGAAACAGACCGCCCAAGAACCCAAGAAATCCCAAGAAAACATGCTGCTT ATGAATTAAAGTGAGCACCC
Downstream 100 bases:
>100_bases ATTTCTACCTACGACCTGAAATTCTAGTTAGCAACCCAATTAAGAACCGGCCCATCCCTAAATAGGGAGGGCCGGCCATG TTGTCTACAGGTTACCAGCC
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Drug Resistance Efflux Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MRSGNANRVFIGVTILLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSLLAGGVLADRFGARMVVLTGG VLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAWAGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIIT PFAISVALSLIAVVVGFALGDARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDSTFGNAILL PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASILFGTAYGLCLREGLLSIETY TPLNRRGTGIGIYYVFTYLGFGLPVLLDALLPHLGASIPLYALAALALGSAVIRGVQIKRGYVV
Sequences:
>Translated_384_residues MRSGNANRVFIGVTILLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSLLAGGVLADRFGARMVVLTGG VLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAWAGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIIT PFAISVALSLIAVVVGFALGDARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDSTFGNAILL PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASILFGTAYGLCLREGLLSIETY TPLNRRGTGIGIYYVFTYLGFGLPVLLDALLPHLGASIPLYALAALALGSAVIRGVQIKRGYVV >Mature_384_residues MRSGNANRVFIGVTILLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSLLAGGVLADRFGARMVVLTGG VLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAWAGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIIT PFAISVALSLIAVVVGFALGDARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDSTFGNAILL PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASILFGTAYGLCLREGLLSIETY TPLNRRGTGIGIYYVFTYLGFGLPVLLDALLPHLGASIPLYALAALALGSAVIRGVQIKRGYVV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39201; Mature: 39201
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGNANRVFIGVTILLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSL CCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LAGGVLADRFGARMVVLTGGVLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAW HHCCHHHHHHCCEEEEEECHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHH AGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIITPFAISVALSLIAVVVGFALG HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDSTFGNAILL CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LFGTAYGLCLREGLLSIETYTPLNRRGTGIGIYYVFTYLGFGLPVLLDALLPHLGASIPL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH YALAALALGSAVIRGVQIKRGYVV HHHHHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure MRSGNANRVFIGVTILLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSL CCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LAGGVLADRFGARMVVLTGGVLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAW HHCCHHHHHHCCEEEEEECHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHH AGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIITPFAISVALSLIAVVVGFALG HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDSTFGNAILL CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LFGTAYGLCLREGLLSIETYTPLNRRGTGIGIYYVFTYLGFGLPVLLDALLPHLGASIPL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH YALAALALGSAVIRGVQIKRGYVV HHHHHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA