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The map label for this gene is 62388935

Identifier: 62388935

GI number: 62388935

Start: 40186

End: 40458

Strand: Reverse

Name: 62388935

Synonym: cg0055

Alternate gene names: NA

Gene position: 40458-40186 (Counterclockwise)

Preceding gene: 62388936

Following gene: 62388931

Centisome position: 1.23

GC content: 51.65

Gene sequence:

>273_bases
ATGCCAAAGGCAAGAGTAACTAAAAACGAGACCGCACCGGTTTCAAGCAACCCAAGCGCAAACCGCACCCCGGTTAAGAT
CAATTCCGCCGGAACCCCAATGTGGTACAAGGTCATCATGTTTGCCTTCATGATCGTCGGCCTAGCCTGGTTGATCATTA
ACTACCTCGTGGGCCCACAGATCCCATTCATGGCTGATCTTGGTGCATGGAACTATGGCATCGGCTTCGGTCTGATGATC
ATCGGCCTACTCATGACCATGGGTTGGCGTTAA

Upstream 100 bases:

>100_bases
GTCAAGGTAGCTGGCCCGGCAACTGATACGTTAAGCTCAAACAAGATAAGTACCAGTTGCTGGGGTTTTTCCAAGACAAT
AAATTATGAAGGTGTGAACA

Downstream 100 bases:

>100_bases
TCCTTCAAAAAAGTGACTGCCGCAGCACAGCGTTGATTCGTTGTGCTGCGGCAGTTGTTTTGTGCGGGCGGATCCAGATT
TAGCCCCTCATGGGCACTCT

Product: septation inhibitor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MPKARVTKNETAPVSSNPSANRTPVKINSAGTPMWYKVIMFAFMIVGLAWLIINYLVGPQIPFMADLGAWNYGIGFGLMI
IGLLMTMGWR

Sequences:

>Translated_90_residues
MPKARVTKNETAPVSSNPSANRTPVKINSAGTPMWYKVIMFAFMIVGLAWLIINYLVGPQIPFMADLGAWNYGIGFGLMI
IGLLMTMGWR
>Mature_89_residues
PKARVTKNETAPVSSNPSANRTPVKINSAGTPMWYKVIMFAFMIVGLAWLIINYLVGPQIPFMADLGAWNYGIGFGLMII
GLLMTMGWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0233 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y040_CORGL (Q8NU99)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927148
- RefSeq:   NP_599292.1
- RefSeq:   YP_224337.1
- GeneID:   1021328
- GeneID:   3344412
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg0055
- KEGG:   cgl:NCgl0039
- HOGENOM:   HBG483368
- OMA:   LLMTMGW
- ProtClustDB:   PRK00159
- BioCyc:   CGLU196627:CG0055-MONOMER
- HAMAP:   MF_00631
- InterPro:   IPR009619

Pfam domain/function: PF06781 UPF0233

EC number: NA

Molecular weight: Translated: 9950; Mature: 9819

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10da15f8)-; HASH(0x10f7ac4c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKARVTKNETAPVSSNPSANRTPVKINSAGTPMWYKVIMFAFMIVGLAWLIINYLVGPQ
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPFMADLGAWNYGIGFGLMIIGLLMTMGWR
CCCHHCCCCCCHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
PKARVTKNETAPVSSNPSANRTPVKINSAGTPMWYKVIMFAFMIVGLAWLIINYLVGPQ
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPFMADLGAWNYGIGFGLMIIGLLMTMGWR
CCCHHCCCCCCHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12948626