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The map label for this gene is fliP [C]

Identifier: 62185507

GI number: 62185507

Start: 1061196

End: 1062113

Strand: Direct

Name: fliP [C]

Synonym: CAB907

Alternate gene names: 62185507

Gene position: 1061196-1062113 (Clockwise)

Preceding gene: 62185506

Following gene: 62185508

Centisome position: 92.73

GC content: 41.39

Gene sequence:

>918_bases
ATGCGTTTCATTTTTCGTACTTTCCTGTGTATGTTTATCTTGAGCGCACCGTGGTGTCTTGCAGATAACGGATTATACGA
TACCTCTTGTTCGTCGCGTTGTCAGCCCTCTAAACCTACAGAGTTGCCTGTGGCTTCTCCACAACCTGAAGTAAAAAAAA
CTTACCCCCAGCCTACATTCCGAGAAAGAGTCACAGCTGACGATGTTCTTCCTCGAGAACACCTGTCCGAAGGAAGTTTT
TCCGATACCTATCCTGATCTGACTACTCAGGCAGTCATCTTAATTTTCCTAGCATTGTCCCCTTTCCTGATGATGCTGCT
AACATCATATTTGAAAATTATTATCACTCTCGTTCTGCTAAGAAACGCTTTAGGCGTACAACAAACTCCACCTAGCCAGG
TCCTTAACGGGATCGCATTGATTCTTTCTATTTATGTGATGTTCCCTACCGGCGTGGCTATGTACAATGACGCTAGGAAA
GAAATTCAAGGCAATGCTATCCCTAGAGACCTATTCTCAGCAGAAGGCGCAGAAACGGTTTTCGTAGCACTAAACAAATC
CAAAGAACCCTTACGGTCATTCTTAATACGCAATACGCCAAAAAGTCAGATCCAAAGTTTTTATAAGATTTCTCAAAAAA
CATTTCCCCCAGAGATCCGAGAACATATGACAGCTTCGGATTTTGTGATTGTCATTCCTGCTTTTATTATGGGGCAGATT
AAAAATGCTTTTGAAATAGGCGTCCTCATTTACCTACCGTTCTTTGTCATAGATTTAGTCACAGCCAATGTTTTGGTAGC
TATGCAAATGATGATGCTTTCGCCACTATCGATTTCGCTACCTTTAAAATTACTTCTTGTTGTGATGGTGGATGGTTGGA
CGTTATTACTTCAAGGTCTCATGATTAGCTTTAAATAG

Upstream 100 bases:

>100_bases
TACAATTAGCTGCTTTAGAAAAAGCGTTCTCTACTATACTAAAACAACAAAATCCTGTAGATGAAGCTCAGAACAAGCAA
GAATAAAGGTATTTGACATC

Downstream 100 bases:

>100_bases
GGATATGCCGTGATAGCACTCGCCGCAAGTTTTAAATCCATGCTCTTTGAGTATTCCTATCAGTCGTTGTTACTGATTTT
GATTATCTCTGCGCCTCCGA

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRFIFRTFLCMFILSAPWCLADNGLYDTSCSSRCQPSKPTELPVASPQPEVKKTYPQPTFRERVTADDVLPREHLSEGSF
SDTYPDLTTQAVILIFLALSPFLMMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARK
EIQGNAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASDFVIVIPAFIMGQI
KNAFEIGVLIYLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGLMISFK

Sequences:

>Translated_305_residues
MRFIFRTFLCMFILSAPWCLADNGLYDTSCSSRCQPSKPTELPVASPQPEVKKTYPQPTFRERVTADDVLPREHLSEGSF
SDTYPDLTTQAVILIFLALSPFLMMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARK
EIQGNAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASDFVIVIPAFIMGQI
KNAFEIGVLIYLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGLMISFK
>Mature_305_residues
MRFIFRTFLCMFILSAPWCLADNGLYDTSCSSRCQPSKPTELPVASPQPEVKKTYPQPTFRERVTADDVLPREHLSEGSF
SDTYPDLTTQAVILIFLALSPFLMMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARK
EIQGNAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASDFVIVIPAFIMGQI
KNAFEIGVLIYLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGLMISFK

Specific function: Important for pathogenicity [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=208, Percent_Identity=40.3846153846154, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 34212; Mature: 34212

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIFRTFLCMFILSAPWCLADNGLYDTSCSSRCQPSKPTELPVASPQPEVKKTYPQPTF
CHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHH
RERVTADDVLPREHLSEGSFSDTYPDLTTQAVILIFLALSPFLMMLLTSYLKIIITLVLL
HHHCCHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQGNAIPRDLFSAEGAETV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEE
FVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASDFVIVIPAFIMGQI
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHH
KNAFEIGVLIYLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH
MISFK
HHCCC
>Mature Secondary Structure
MRFIFRTFLCMFILSAPWCLADNGLYDTSCSSRCQPSKPTELPVASPQPEVKKTYPQPTF
CHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHH
RERVTADDVLPREHLSEGSFSDTYPDLTTQAVILIFLALSPFLMMLLTSYLKIIITLVLL
HHHCCHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQGNAIPRDLFSAEGAETV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEE
FVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASDFVIVIPAFIMGQI
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHH
KNAFEIGVLIYLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH
MISFK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1312532 [H]