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The map label for this gene is hrpB3 [H]

Identifier: 62185504

GI number: 62185504

Start: 1058534

End: 1059526

Strand: Direct

Name: hrpB3 [H]

Synonym: CAB904

Alternate gene names: 62185504

Gene position: 1058534-1059526 (Clockwise)

Preceding gene: 62185503

Following gene: 62185505

Centisome position: 92.5

GC content: 41.99

Gene sequence:

>993_bases
ATGTTTCGTAGTTCTATTTCTTGTTGCTTATTCTTTATAATGACCTTATTTTGCTGTACAAGTTGTAACAGCAGATCGCT
CATCGTTCATGGGCTTGCAGGAAGAGAAGCTAATGAGATTGTCGTTCTTCTTGTTAGCAAAGGTGTCGCCGCTCAAAAGC
AACCACAAGCTGCTGCTTCTACAGGAGGTGCCTCTGCAGAACAACTATGGGATATTTCTGTTCCTGCAGCGCAAATTACA
GAAGCATTAGCCATTTTAAATCAGGCTGGTCTTCCTAGAATGAAAGGCACTAGCCTCTTAGATCTATTCGCCAAACAAGG
TCTTGTCCCATCAGAAATGCAAGAAAAGATCCGGTATCAAGAAGGTCTTTCTGAGCAAATGGCTTCTACCATTAGAAAAA
TGGACGGGATCGTTGACGCTAGCGTACAAATTTCTTTCACCACAGAAGCTGAGGATAATCTTCCTTTAACTGCCTCAGTA
TACATTAAGCATCGTGGAGTTTTAGATAACCCCAATAGCATCATGGTCTCTAAAATTAAACGCTTGGTAGCCAGTGCTGT
CCCAGGATTGTCTACAGAAAACGTTTCTGTCATTAGTGACCGAGCCTCCTATAGTGATATCACTATTAATGGCCCTTGGG
GATTGACCGATGAAATTGACTATGTCTCCGTATGGGGTATCATCCTAGCAAAATCTTCGTTAGGTAAATTCCGTTTAATC
TTTTACTTCTTAATACTTACCCTATTCATTATCTCTTGTGGATTGCTTTGGGTAATTTGGAAAACGCATACATTGATTCT
TTCCTTAGGTGGAGCCAAAGGCTTTTTCGACCCAGCTCCCTATTCTAAAGTTGCCCTAGAGACTAAGAAACCCGAAGAAG
GTGCCGGAGAGAAAAAAGAAGGACAAGCTCAACCTAATCCAGAGGGTACAGAAGATCCTAAAGACAATGCACCAGAGGCA
ACAGAAGGAAACGAAGAAAATGAGGGTGTCTAG

Upstream 100 bases:

>100_bases
CTCATGTTAATAGAAATCAAAAACATATTTCATGTTTAATGTTCACGATTGGCACTAATCCCCCCTTTTGTTATGGTGAG
TAAAAAGGTATGCGTGGGTT

Downstream 100 bases:

>100_bases
TGACCGCCAACACTTTTGGAACGTTGAATATCTTAATGAAGTATTCCAAAGAAGACGATCTTGCAAATTTTTTGCCAGAG
GATCTCTTAATCTCACCTAC

Product: putative type III export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MFRSSISCCLFFIMTLFCCTSCNSRSLIVHGLAGREANEIVVLLVSKGVAAQKQPQAAASTGGASAEQLWDISVPAAQIT
EALAILNQAGLPRMKGTSLLDLFAKQGLVPSEMQEKIRYQEGLSEQMASTIRKMDGIVDASVQISFTTEAEDNLPLTASV
YIKHRGVLDNPNSIMVSKIKRLVASAVPGLSTENVSVISDRASYSDITINGPWGLTDEIDYVSVWGIILAKSSLGKFRLI
FYFLILTLFIISCGLLWVIWKTHTLILSLGGAKGFFDPAPYSKVALETKKPEEGAGEKKEGQAQPNPEGTEDPKDNAPEA
TEGNEENEGV

Sequences:

>Translated_330_residues
MFRSSISCCLFFIMTLFCCTSCNSRSLIVHGLAGREANEIVVLLVSKGVAAQKQPQAAASTGGASAEQLWDISVPAAQIT
EALAILNQAGLPRMKGTSLLDLFAKQGLVPSEMQEKIRYQEGLSEQMASTIRKMDGIVDASVQISFTTEAEDNLPLTASV
YIKHRGVLDNPNSIMVSKIKRLVASAVPGLSTENVSVISDRASYSDITINGPWGLTDEIDYVSVWGIILAKSSLGKFRLI
FYFLILTLFIISCGLLWVIWKTHTLILSLGGAKGFFDPAPYSKVALETKKPEEGAGEKKEGQAQPNPEGTEDPKDNAPEA
TEGNEENEGV
>Mature_330_residues
MFRSSISCCLFFIMTLFCCTSCNSRSLIVHGLAGREANEIVVLLVSKGVAAQKQPQAAASTGGASAEQLWDISVPAAQIT
EALAILNQAGLPRMKGTSLLDLFAKQGLVPSEMQEKIRYQEGLSEQMASTIRKMDGIVDASVQISFTTEAEDNLPLTASV
YIKHRGVLDNPNSIMVSKIKRLVASAVPGLSTENVSVISDRASYSDITINGPWGLTDEIDYVSVWGIILAKSSLGKFRLI
FYFLILTLFIISCGLLWVIWKTHTLILSLGGAKGFFDPAPYSKVALETKKPEEGAGEKKEGQAQPNPEGTEDPKDNAPEA
TEGNEENEGV

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. Could be a part of a specific transport apparatus or a secretion apparatus that is required for pathogenicity. Hrp proteins may form a complex (tu

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 35620; Mature: 35620

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSSISCCLFFIMTLFCCTSCNSRSLIVHGLAGREANEIVVLLVSKGVAAQKQPQAAAS
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH
TGGASAEQLWDISVPAAQITEALAILNQAGLPRMKGTSLLDLFAKQGLVPSEMQEKIRYQ
CCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
EGLSEQMASTIRKMDGIVDASVQISFTTEAEDNLPLTASVYIKHRGVLDNPNSIMVSKIK
HCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
RLVASAVPGLSTENVSVISDRASYSDITINGPWGLTDEIDYVSVWGIILAKSSLGKFRLI
HHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
FYFLILTLFIISCGLLWVIWKTHTLILSLGGAKGFFDPAPYSKVALETKKPEEGAGEKKE
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
GQAQPNPEGTEDPKDNAPEATEGNEENEGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRSSISCCLFFIMTLFCCTSCNSRSLIVHGLAGREANEIVVLLVSKGVAAQKQPQAAAS
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH
TGGASAEQLWDISVPAAQITEALAILNQAGLPRMKGTSLLDLFAKQGLVPSEMQEKIRYQ
CCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
EGLSEQMASTIRKMDGIVDASVQISFTTEAEDNLPLTASVYIKHRGVLDNPNSIMVSKIK
HCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
RLVASAVPGLSTENVSVISDRASYSDITINGPWGLTDEIDYVSVWGIILAKSSLGKFRLI
HHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
FYFLILTLFIISCGLLWVIWKTHTLILSLGGAKGFFDPAPYSKVALETKKPEEGAGEKKE
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
GQAQPNPEGTEDPKDNAPEATEGNEENEGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]