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The map label for this gene is glgA

Identifier: 62185395

GI number: 62185395

Start: 917069

End: 918496

Strand: Direct

Name: glgA

Synonym: CAB790

Alternate gene names: 62185395

Gene position: 917069-918496 (Clockwise)

Preceding gene: 62185387

Following gene: 62185397

Centisome position: 80.14

GC content: 39.99

Gene sequence:

>1428_bases
ATGAAAATCATACAAGCTTCTGTAGAATGTGCTCCTTTTATTAAAGCTGGTGGGCTGGGAGATGTTGTTTATAGTTTATC
GAAAGCCTTATCTATCCACCATGACGTTGAAATCCTACTCCCCTTCTATCCTCTTCTATTCCCTGCGTTTTCTTCTCAAG
TGCTTGATGAGCACGTTTTCGCTTATAACTTTTTAGGAAGACAAAATGCGACCGCCACCTCTTATAGATATGAGGGAATG
ACTCTTACTGTAATTACACTGGACTCACAATTGGAGCTTTTCTCAACGTCGACTATCTACACCGAAGATGACACGCTACG
TTTCAGTGCTTTTTCTGCTGCTGCTGCTGCCTATATTCAAAAATTGGATAAAGTGGATGTTGTGCATATGCATGACTGGC
ACGTAGGACTTTTAGCTGGGCTATTAAAAGAACCTCATCTTCCTAGCTATCCAAAAAGAATTTTTACAATTCACAACTTT
AGTTATCGAGGCTACTGCAGTACACAATTGCTTGGAGCATCTGAAATTAGTGATTTCGGGTTAAGCAATTACCAATTATT
TAGGGATCCGAGCACGAGTGTCTTACTCAAAGGAGCCTTATATTGTTCTGATTACATTACTACTGTATCTCCTTCATATG
CCCAGGATATACTCAATGATTATTCGGATTATGAAATACACGATGCCATCATGTCTCGACGTCATGTTTTCTGTGGTATT
TTGAATGGTATAGATGAAAATATTTGGAATCCAGAAACAGATCCGGCTTTAGCTGTACGTTATGGTACGCATTTACTTAA
GTCTCCTGATGTCCTATTTACCAAGAAAGAAGAAAACAAAATTGCCCTGTATGAGAAATTAGGGTTGTCTCTTGAATACT
CGCCTTTAATGTGTGTGATCTCAAGGATCGTGGAACAAAAAGGTCCTGAGTTTATGAAAGCAGCTATTCTTCATGCTATG
GAAAATAGTTATGCTTTAGTCATTGCAGGCACATGCTATGATCAAGAAACTCAAAGACAATTTACCAATTTACAAGAATC
TTTAACGACTTCACCGAATATTCGAATTATTTTGGATTATAATGATCCCCTAGTACGCTTGATTTATGGCGCTGCGGATA
TGATCTGCATTCCTTCACATTTTGAACCTTGTGGACTTACACAGCTGATTGGAATGCGTTATGGAACCGTGCCTCTAGTT
CGCTCTACTGGGGGTCTTGCGGATACCGTTGCTGCGGGGGTCAATGGTTTTACTTTTTCCCATACGGATAACTTCAATGA
CTTCTTTCATATGTTATCCCAAGCAGTTTCTACCTATAGGCACGAACCTGACGTGTGGTTTCAACTTGTTGAAGAGGGGA
TGTTACGCCCATCAGGACTAACAACCATGGCTGCTCATTACTTAGGGGTCTATAATTCCTTGTTGTGA

Upstream 100 bases:

>100_bases
ACAACATCAAGTGGTTATGGCGAAAAATCGCCCTTTTCGTCTTGTGATTTTTGTTCTTAGCTTGCTATGACGCATAGATA
AGCTATAAAAAGAGAAAGCC

Downstream 100 bases:

>100_bases
TCGTTTGCCTTAGACTTTGCCCTTTGTAGCACATGATTCTTATTCACCCAAAAGTACTCGGCTCCTGAACATACGGAATA
GATAGCTACTATAAACCCAA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKIIQASVECAPFIKAGGLGDVVYSLSKALSIHHDVEILLPFYPLLFPAFSSQVLDEHVFAYNFLGRQNATATSYRYEGM
TLTVITLDSQLELFSTSTIYTEDDTLRFSAFSAAAAAYIQKLDKVDVVHMHDWHVGLLAGLLKEPHLPSYPKRIFTIHNF
SYRGYCSTQLLGASEISDFGLSNYQLFRDPSTSVLLKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGI
LNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYSPLMCVISRIVEQKGPEFMKAAILHAM
ENSYALVIAGTCYDQETQRQFTNLQESLTTSPNIRIILDYNDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLV
RSTGGLADTVAAGVNGFTFSHTDNFNDFFHMLSQAVSTYRHEPDVWFQLVEEGMLRPSGLTTMAAHYLGVYNSLL

Sequences:

>Translated_475_residues
MKIIQASVECAPFIKAGGLGDVVYSLSKALSIHHDVEILLPFYPLLFPAFSSQVLDEHVFAYNFLGRQNATATSYRYEGM
TLTVITLDSQLELFSTSTIYTEDDTLRFSAFSAAAAAYIQKLDKVDVVHMHDWHVGLLAGLLKEPHLPSYPKRIFTIHNF
SYRGYCSTQLLGASEISDFGLSNYQLFRDPSTSVLLKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGI
LNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYSPLMCVISRIVEQKGPEFMKAAILHAM
ENSYALVIAGTCYDQETQRQFTNLQESLTTSPNIRIILDYNDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLV
RSTGGLADTVAAGVNGFTFSHTDNFNDFFHMLSQAVSTYRHEPDVWFQLVEEGMLRPSGLTTMAAHYLGVYNSLL
>Mature_475_residues
MKIIQASVECAPFIKAGGLGDVVYSLSKALSIHHDVEILLPFYPLLFPAFSSQVLDEHVFAYNFLGRQNATATSYRYEGM
TLTVITLDSQLELFSTSTIYTEDDTLRFSAFSAAAAAYIQKLDKVDVVHMHDWHVGLLAGLLKEPHLPSYPKRIFTIHNF
SYRGYCSTQLLGASEISDFGLSNYQLFRDPSTSVLLKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGI
LNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYSPLMCVISRIVEQKGPEFMKAAILHAM
ENSYALVIAGTCYDQETQRQFTNLQESLTTSPNIRIILDYNDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLV
RSTGGLADTVAAGVNGFTFSHTDNFNDFFHMLSQAVSTYRHEPDVWFQLVEEGMLRPSGLTTMAAHYLGVYNSLL

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=500, Percent_Identity=31.6, Blast_Score=203, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_CHLAB (Q5L562)

Other databases:

- EMBL:   CR848038
- RefSeq:   YP_220180.1
- ProteinModelPortal:   Q5L562
- SMR:   Q5L562
- GeneID:   3337318
- GenomeReviews:   CR848038_GR
- KEGG:   cab:CAB790
- HOGENOM:   HBG596384
- OMA:   RMFAGSD
- PhylomeDB:   Q5L562
- ProtClustDB:   PRK00654
- BioCyc:   CABO218497:CAB790-MONOMER
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 53182; Mature: 53182

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIQASVECAPFIKAGGLGDVVYSLSKALSIHHDVEILLPFYPLLFPAFSSQVLDEHVF
CCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYNFLGRQNATATSYRYEGMTLTVITLDSQLELFSTSTIYTEDDTLRFSAFSAAAAAYIQ
HHHHHCCCCCCCCEEEECCEEEEEEEECCCEEEEECEEEEECCCCEEEHHHHHHHHHHHH
KLDKVDVVHMHDWHVGLLAGLLKEPHLPSYPKRIFTIHNFSYRGYCSTQLLGASEISDFG
HHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHCC
LSNYQLFRDPSTSVLLKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGI
CCCEEEECCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYSPLMCVI
HHHHHHHCCCCCCCCEEEEEHHHHHHCCCCEEEEECCCCCEEEEHHHCCCCCCCHHHHHH
SRIVEQKGPEFMKAAILHAMENSYALVIAGTCYDQETQRQFTNLQESLTTSPNIRIILDY
HHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
NDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVAAGVNGFTFS
CCHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCEEEC
HTDNFNDFFHMLSQAVSTYRHEPDVWFQLVEEGMLRPSGLTTMAAHYLGVYNSLL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIIQASVECAPFIKAGGLGDVVYSLSKALSIHHDVEILLPFYPLLFPAFSSQVLDEHVF
CCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYNFLGRQNATATSYRYEGMTLTVITLDSQLELFSTSTIYTEDDTLRFSAFSAAAAAYIQ
HHHHHCCCCCCCCEEEECCEEEEEEEECCCEEEEECEEEEECCCCEEEHHHHHHHHHHHH
KLDKVDVVHMHDWHVGLLAGLLKEPHLPSYPKRIFTIHNFSYRGYCSTQLLGASEISDFG
HHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHCC
LSNYQLFRDPSTSVLLKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGI
CCCEEEECCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYSPLMCVI
HHHHHHHCCCCCCCCEEEEEHHHHHHCCCCEEEEECCCCCEEEEHHHCCCCCCCHHHHHH
SRIVEQKGPEFMKAAILHAMENSYALVIAGTCYDQETQRQFTNLQESLTTSPNIRIILDY
HHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
NDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVAAGVNGFTFS
CCHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCEEEC
HTDNFNDFFHMLSQAVSTYRHEPDVWFQLVEEGMLRPSGLTTMAAHYLGVYNSLL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA