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The map label for this gene is cdu2 [H]

Identifier: 62185296

GI number: 62185296

Start: 793498

End: 794631

Strand: Direct

Name: cdu2 [H]

Synonym: CAB683

Alternate gene names: 62185296

Gene position: 793498-794631 (Clockwise)

Preceding gene: 62185295

Following gene: 62185297

Centisome position: 69.34

GC content: 39.95

Gene sequence:

>1134_bases
ATGGCTAACTTTCTTCTTTCTCCGCCAACTACTTACCAAAGATCTATTGATACATTATACAATCCGTATAATACCTACGT
TCTCGGAGCAAGAACAGTGAGTTTCGTAAATAAAAAAACACCTATTACTGGACCAGGCTCCTTTGATAACGCTTCATTTT
TAAGTAAGTTAGCTAGAGTCATGCTAGCTTCTATCTGTATTATTATTACTCTAGGGTTGGTTCTATGTTGTATGTCTACA
CAGAACCTCTTGGACTTAGATATCCGCTGTTCTTGTATAGATGACGCAGAATATGTATATTATTACCCACCTTACCTGTA
TGATCCGTCTATATTTAGTCCAAAACCGGAAATTTTATTTAGTAGCTGGGACCATCTAGAGATCTCAACTCATTTGATCA
GGCTGTCTGAGAAGCATTCGGATCTATTCGTGCCCTCTCTTTATACACCATCCACCTGTTTTTCTATAGAGCGCGCGGTG
TTAAAAGACTTACACTTGTATGATTCCTCTACGCAAAGTGTTTTAGACCACCCCGATAGTACTCAATGTCACCACCAAAA
CAATTACCAAGACTATCCTCATTTAGCGGATAGGGACTGTCAAAATTTCCGCATCTACGCTTACCCATTATGGCACCACC
CTAGCGCGCATAATCCAGAGGAAATGAATTCCATGATGCTATCAACAGCACGAAGGGGTTTTGCGGGTATATCTCATTGG
ACACTAGTCATCGTAAACTTAGACAGAAGAGAGGTTGTTTTCTTTGACAGCCTAGCGAATTTTATAAATAATCGGCTAAT
TGACCCGGCACTAAACTCTATAGCTACTAGATTAGGAAATGTGTATCCCGATGCCAATGGAGCGTTGTCTCCGTTTATTG
TCAAAAAAGTTATAAAAACCCCTATACAACAAGACAGTACGTCTTGCGGAATTTGGCTTTCTCTATTCCTTGATAAATAC
TTAGACAATCCTGACTACGTGCCTCCCTTAATGGGAGGAAGACAGGCTCAATATTTCTTACAGGAATTCTTAGAAACTAT
TCCCCAACGCCCAATAACCCAAGCTTCTGACTGCACTCTTAACGTTCTAGGAATTACATGCGACCAAGTAGAAAACTCAT
CCAATATGCTATAA

Upstream 100 bases:

>100_bases
AGATAATGTAAAATAATAAGAAGTTAATAAAAAATAAAATGATTTTTTTCCTTTAAACAACTACAATATTTGCAAAAAAA
AAAAATAAAATAACAGTTTT

Downstream 100 bases:

>100_bases
CCATCCTCACTGTGTTTGCCTCAACTTTTGTGTTAGCAACAACACAGGAAAACCCTCCGTGTGTCATACTGACAGGAGCT
TCGGGGCAACTAGGTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ChlaDub2 [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MANFLLSPPTTYQRSIDTLYNPYNTYVLGARTVSFVNKKTPITGPGSFDNASFLSKLARVMLASICIIITLGLVLCCMST
QNLLDLDIRCSCIDDAEYVYYYPPYLYDPSIFSPKPEILFSSWDHLEISTHLIRLSEKHSDLFVPSLYTPSTCFSIERAV
LKDLHLYDSSTQSVLDHPDSTQCHHQNNYQDYPHLADRDCQNFRIYAYPLWHHPSAHNPEEMNSMMLSTARRGFAGISHW
TLVIVNLDRREVVFFDSLANFINNRLIDPALNSIATRLGNVYPDANGALSPFIVKKVIKTPIQQDSTSCGIWLSLFLDKY
LDNPDYVPPLMGGRQAQYFLQEFLETIPQRPITQASDCTLNVLGITCDQVENSSNML

Sequences:

>Translated_377_residues
MANFLLSPPTTYQRSIDTLYNPYNTYVLGARTVSFVNKKTPITGPGSFDNASFLSKLARVMLASICIIITLGLVLCCMST
QNLLDLDIRCSCIDDAEYVYYYPPYLYDPSIFSPKPEILFSSWDHLEISTHLIRLSEKHSDLFVPSLYTPSTCFSIERAV
LKDLHLYDSSTQSVLDHPDSTQCHHQNNYQDYPHLADRDCQNFRIYAYPLWHHPSAHNPEEMNSMMLSTARRGFAGISHW
TLVIVNLDRREVVFFDSLANFINNRLIDPALNSIATRLGNVYPDANGALSPFIVKKVIKTPIQQDSTSCGIWLSLFLDKY
LDNPDYVPPLMGGRQAQYFLQEFLETIPQRPITQASDCTLNVLGITCDQVENSSNML
>Mature_376_residues
ANFLLSPPTTYQRSIDTLYNPYNTYVLGARTVSFVNKKTPITGPGSFDNASFLSKLARVMLASICIIITLGLVLCCMSTQ
NLLDLDIRCSCIDDAEYVYYYPPYLYDPSIFSPKPEILFSSWDHLEISTHLIRLSEKHSDLFVPSLYTPSTCFSIERAVL
KDLHLYDSSTQSVLDHPDSTQCHHQNNYQDYPHLADRDCQNFRIYAYPLWHHPSAHNPEEMNSMMLSTARRGFAGISHWT
LVIVNLDRREVVFFDSLANFINNRLIDPALNSIATRLGNVYPDANGALSPFIVKKVIKTPIQQDSTSCGIWLSLFLDKYL
DNPDYVPPLMGGRQAQYFLQEFLETIPQRPITQASDCTLNVLGITCDQVENSSNML

Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protease possesses deubiquitinating and deneddylating activities [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Host cell (By similarity). Membrane; Single-pass membrane protein (By similarity). Note=Secreted, and delivered into the host cell (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C48 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003653 [H]

Pfam domain/function: PF02902 Peptidase_C48 [H]

EC number: NA

Molecular weight: Translated: 42809; Mature: 42678

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFLLSPPTTYQRSIDTLYNPYNTYVLGARTVSFVNKKTPITGPGSFDNASFLSKLARV
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
MLASICIIITLGLVLCCMSTQNLLDLDIRCSCIDDAEYVYYYPPYLYDPSIFSPKPEILF
HHHHHHHHHHHHHHHHHHCCCCCEEECEEEEEECCCCEEEECCCEEECCCCCCCCCCCEE
SSWDHLEISTHLIRLSEKHSDLFVPSLYTPSTCFSIERAVLKDLHLYDSSTQSVLDHPDS
CCCCCEEHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
TQCHHQNNYQDYPHLADRDCQNFRIYAYPLWHHPSAHNPEEMNSMMLSTARRGFAGISHW
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
TLVIVNLDRREVVFFDSLANFINNRLIDPALNSIATRLGNVYPDANGALSPFIVKKVIKT
EEEEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
PIQQDSTSCGIWLSLFLDKYLDNPDYVPPLMGGRQAQYFLQEFLETIPQRPITQASDCTL
CHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE
NVLGITCDQVENSSNML
EEEEEEHHHCCCCCCCC
>Mature Secondary Structure 
ANFLLSPPTTYQRSIDTLYNPYNTYVLGARTVSFVNKKTPITGPGSFDNASFLSKLARV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
MLASICIIITLGLVLCCMSTQNLLDLDIRCSCIDDAEYVYYYPPYLYDPSIFSPKPEILF
HHHHHHHHHHHHHHHHHHCCCCCEEECEEEEEECCCCEEEECCCEEECCCCCCCCCCCEE
SSWDHLEISTHLIRLSEKHSDLFVPSLYTPSTCFSIERAVLKDLHLYDSSTQSVLDHPDS
CCCCCEEHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
TQCHHQNNYQDYPHLADRDCQNFRIYAYPLWHHPSAHNPEEMNSMMLSTARRGFAGISHW
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
TLVIVNLDRREVVFFDSLANFINNRLIDPALNSIATRLGNVYPDANGALSPFIVKKVIKT
EEEEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
PIQQDSTSCGIWLSLFLDKYLDNPDYVPPLMGGRQAQYFLQEFLETIPQRPITQASDCTL
CHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE
NVLGITCDQVENSSNML
EEEEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA