| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185229
Identifier: 62185229
GI number: 62185229
Start: 708480
End: 709103
Strand: Direct
Name: 62185229
Synonym: CAB617
Alternate gene names: NA
Gene position: 708480-709103 (Clockwise)
Preceding gene: 62185228
Following gene: 62185230
Centisome position: 61.91
GC content: 41.03
Gene sequence:
>624_bases GTGGCCTGTAATATCCCCCAAGAAAGGATTTCTGAAAACGGGTCTCAAGGAAGTTATCTTCTTCCTGTGAAGTGTCCTAT CTCTTCCTCCGTCTTGGGTGTCCTCATCAGCATAACTGCAATTTTTTCTACAGCTGTCATTACCTCTTTAAGTTTAACTT GCTCTCCGCCAATCCTTGTCATCGTCACAGCACTAGTCTCAGCTGTCCTTGCTATCCTATGCTTCCTGCAAATTGTTTTT CATATCCATGGTAAGAAAACACGTATTTTAGAACTGACACATGATGAGTCACCTCCCGCGGTTGCCAATTTACCCGCTAT CTCTATAGCTCCTCAACTATCAGACACACTATCCGATGAATTACAACAACAGCTATCTAGAGAATCAGGTGTAGACACAA TAGAATATATCACACATGTTAAAGCTAACGATTTCATGACAGATAGAGATGCGTGGCAGCGCGTTTTCTTAAAAAATCCT CTATTTTTGCTACAAAGCGCCCTCTCTTCATGGCAAAACGAATATGTTGTCCTCTCTAAAGATTACATAGGGTTTCGTCT TGTCTTCACGGAATGTGATTTTGAAGAACTTGAAACAGAGACTTTCATTACCCAACAACCATAA
Upstream 100 bases:
>100_bases AGAGCAGTGGACTGTTAATCCATTGGTCGTTGGTTCGAACCCATCCTCCGGAGTTTTTTCTTTATTAAGGTTCGCATGAC ATAGAGAGGAAATAAGGTCT
Downstream 100 bases:
>100_bases CGCTGTTACATACATCAAGTTCTTGACACCGATCTACCCGAAGAAATGAATAACAATCGCGTCATAAGAACACAGTTGGA CAATCTAGATTATGTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MACNIPQERISENGSQGSYLLPVKCPISSSVLGVLISITAIFSTAVITSLSLTCSPPILVIVTALVSAVLAILCFLQIVF HIHGKKTRILELTHDESPPAVANLPAISIAPQLSDTLSDELQQQLSRESGVDTIEYITHVKANDFMTDRDAWQRVFLKNP LFLLQSALSSWQNEYVVLSKDYIGFRLVFTECDFEELETETFITQQP
Sequences:
>Translated_207_residues MACNIPQERISENGSQGSYLLPVKCPISSSVLGVLISITAIFSTAVITSLSLTCSPPILVIVTALVSAVLAILCFLQIVF HIHGKKTRILELTHDESPPAVANLPAISIAPQLSDTLSDELQQQLSRESGVDTIEYITHVKANDFMTDRDAWQRVFLKNP LFLLQSALSSWQNEYVVLSKDYIGFRLVFTECDFEELETETFITQQP >Mature_206_residues ACNIPQERISENGSQGSYLLPVKCPISSSVLGVLISITAIFSTAVITSLSLTCSPPILVIVTALVSAVLAILCFLQIVFH IHGKKTRILELTHDESPPAVANLPAISIAPQLSDTLSDELQQQLSRESGVDTIEYITHVKANDFMTDRDAWQRVFLKNPL FLLQSALSSWQNEYVVLSKDYIGFRLVFTECDFEELETETFITQQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22930; Mature: 22798
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACNIPQERISENGSQGSYLLPVKCPISSSVLGVLISITAIFSTAVITSLSLTCSPPILV CCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IVTALVSAVLAILCFLQIVFHIHGKKTRILELTHDESPPAVANLPAISIAPQLSDTLSDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECHHHHHHHHHH LQQQLSRESGVDTIEYITHVKANDFMTDRDAWQRVFLKNPLFLLQSALSSWQNEYVVLSK HHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEC DYIGFRLVFTECDFEELETETFITQQP CCCEEEEEEEECCHHHHHHHHHCCCCC >Mature Secondary Structure ACNIPQERISENGSQGSYLLPVKCPISSSVLGVLISITAIFSTAVITSLSLTCSPPILV CCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IVTALVSAVLAILCFLQIVFHIHGKKTRILELTHDESPPAVANLPAISIAPQLSDTLSDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECHHHHHHHHHH LQQQLSRESGVDTIEYITHVKANDFMTDRDAWQRVFLKNPLFLLQSALSSWQNEYVVLSK HHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEC DYIGFRLVFTECDFEELETETFITQQP CCCEEEEEEEECCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA