| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185195
Identifier: 62185195
GI number: 62185195
Start: 656884
End: 657639
Strand: Direct
Name: 62185195
Synonym: CAB579
Alternate gene names: NA
Gene position: 656884-657639 (Clockwise)
Preceding gene: 62185194
Following gene: 62185196
Centisome position: 57.4
GC content: 39.95
Gene sequence:
>756_bases TTGACGATGGAAATTTCTCATATCTTGGAAGACCTCGCTTACGATGAAGGGATACTTCCCAGAGAGGCTATAGAAGCTGC GATCGTCAAACATGCACAAATCACTCCCTACCTGCTGCAAATTCTTGAAGACGCTACAGAACGCGTGCCAGAGTTAATCA ACGACGGCAGCTATCAAGGGCATCTTTATGCTATGTATTTGCTAGCACAGTTTCGAGAAACTCGAGCTCTTCCATTAATT ATTAAGCTCTTTTCTTACTCTGATGATACACCTCATGCCATTGCTGGTGATGTGCTTACTGAAGATCTCTCAAGGATCCT TGCCAGCGTATGTGATGATGAATCTTTAATTAAAGAGCTTATCGAATCCCCAGGCATTAATCCTTATGTAAAAGCCGCAG GAATTTCTAGTCTTGTGCATCTTGTAGGAATAAAAAAAATCTCTAGAGAGGCAACTATCCGTTATTTTGGAGAACTGCTA AACTACAGATTAGAAAAAATTCGTTCTTTTGCTTGGGATAGTCTCATTGCTGCTATATGCGCTTTGTATCCCGGGGAATT ATTCTACCCGATTAGCAAAGCTTTTGATGCCGGTCTTGTAGATATAACTTTCATAAGCATGGAAGATGTAATAAATATCA TAAATGAAGAAACTATTGAGTCCTGTCTTCAGGAACTTTTGTCCTCACCAGAACTCATTAACGACACCCTAGAAGAAATG GAAAAATGGCTCGAAGATTTTCCTATAGAGCCTTAA
Upstream 100 bases:
>100_bases AAACCGTTATTGAGTCCTTTAGGCATGACGTGTAAATCGTTGACAGGAAGAAGTTGGGCGTGCTACGAATCAAACTAACC GCCGTTAGCATGGAGCATCA
Downstream 100 bases:
>100_bases ACCCTCTCGGGATTTTCCAACAGACTATAACGCAAAGAGGTCCCAAGTGAAAAAACAAAAACGATTCCTGTCTCTTTTAT TTCTCACATTTGTACTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTMEISHILEDLAYDEGILPREAIEAAIVKHAQITPYLLQILEDATERVPELINDGSYQGHLYAMYLLAQFRETRALPLI IKLFSYSDDTPHAIAGDVLTEDLSRILASVCDDESLIKELIESPGINPYVKAAGISSLVHLVGIKKISREATIRYFGELL NYRLEKIRSFAWDSLIAAICALYPGELFYPISKAFDAGLVDITFISMEDVINIINEETIESCLQELLSSPELINDTLEEM EKWLEDFPIEP
Sequences:
>Translated_251_residues MTMEISHILEDLAYDEGILPREAIEAAIVKHAQITPYLLQILEDATERVPELINDGSYQGHLYAMYLLAQFRETRALPLI IKLFSYSDDTPHAIAGDVLTEDLSRILASVCDDESLIKELIESPGINPYVKAAGISSLVHLVGIKKISREATIRYFGELL NYRLEKIRSFAWDSLIAAICALYPGELFYPISKAFDAGLVDITFISMEDVINIINEETIESCLQELLSSPELINDTLEEM EKWLEDFPIEP >Mature_250_residues TMEISHILEDLAYDEGILPREAIEAAIVKHAQITPYLLQILEDATERVPELINDGSYQGHLYAMYLLAQFRETRALPLII KLFSYSDDTPHAIAGDVLTEDLSRILASVCDDESLIKELIESPGINPYVKAAGISSLVHLVGIKKISREATIRYFGELLN YRLEKIRSFAWDSLIAAICALYPGELFYPISKAFDAGLVDITFISMEDVINIINEETIESCLQELLSSPELINDTLEEME KWLEDFPIEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0206/CT_203/TC_0475 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010602 [H]
Pfam domain/function: PF06685 DUF1186 [H]
EC number: NA
Molecular weight: Translated: 28297; Mature: 28166
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMEISHILEDLAYDEGILPREAIEAAIVKHAQITPYLLQILEDATERVPELINDGSYQG CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCH HLYAMYLLAQFRETRALPLIIKLFSYSDDTPHAIAGDVLTEDLSRILASVCDDESLIKEL HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IESPGINPYVKAAGISSLVHLVGIKKISREATIRYFGELLNYRLEKIRSFAWDSLIAAIC HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALYPGELFYPISKAFDAGLVDITFISMEDVINIINEETIESCLQELLSSPELINDTLEEM HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EKWLEDFPIEP HHHHHHCCCCC >Mature Secondary Structure TMEISHILEDLAYDEGILPREAIEAAIVKHAQITPYLLQILEDATERVPELINDGSYQG CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCH HLYAMYLLAQFRETRALPLIIKLFSYSDDTPHAIAGDVLTEDLSRILASVCDDESLIKEL HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IESPGINPYVKAAGISSLVHLVGIKKISREATIRYFGELLNYRLEKIRSFAWDSLIAAIC HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALYPGELFYPISKAFDAGLVDITFISMEDVINIINEETIESCLQELLSSPELINDTLEEM HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EKWLEDFPIEP HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]