| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 60682835
GI number:
Start: 3979546
End: 3985419
Strand: Reverse
Name: Not Available
Synonym: BF3372
Alternate gene names: NA
Gene position: NA
Preceding gene: 60682836
Following gene: 60682832
Centisome position: NA
GC content: NA
Gene sequence:
>5874_bases ATGAGTCAAGAGAATCCTTCTTCACAATTGGATGTGGAATTTATTTATTTGCCTGTTATCAATTATTCCATGCAGCAAAA CCGGATACCTGTTGTCCGGTTACTTTCTATTAAAAATAATACAGAACATCCGCTTGCGGATTTAAAGGTATTTCTAACTC TGGAGCCTGAATTTGCATCAGTTTCACCGGTAATGGTAGAAAAATTAGCTTCCGGTGAGATTATTACAATAACCGGATTA AATCTGATGCTGGACCCTTCTTTTTTTATTCAGCAAACCGAACGCTTGTCCGGTACTATCGTTCTGGTAGTTTCTGATGA AAAAAACGTATTTTTTCAAGAGAAGTATCCTGTTGATATCCTGGCTTTTGATCAATGGGGAGGCATTCAGGTATTGCCTG AACTTTTGTCTGCATTTGTGGTTCCTAATCATCCGGTACTTACAGGAGTTCTTTCGCGGGCGTCATCTATCCTGAAAGAG TGGTCCGGTAATTCTTCATTGGATGCTTATCAGAGTTGTAATCCCAATCGGGTGAAGTTACAATTGGCGGCTCTGTACGA GGCTATTAAAGAACAGCATATTGCATACTGCACGCCTCCGTCCAGTTTTGGTGATGCCGGTCAGCGAGTCAGGCTTTCGG ATAATGTACTTTCCGGTAAATTAGGGACTTGTTTGGATCTGTCACTGTTGTATGCTTCATGTGCCGAAGCCATGGGGTTG CATCCGTTGTTGGTGATCATTCAGGGACATGCTTTTGTGGGATGCTGGTTGATTGACGGGACATTTCCTGATGCGGTGAA CGATGACCCTTCGTTATTGACCAAACGAACGGCGGACGGTATCAACGAAGTTATTTTGCTGGAAGCCACTTGTATGACCG ATGGAAACAATGTGACTTTCGATACCGCAGTCGGGCTGGCTAATGACAAAATGTTGGCTGTGAATGACTTTACTTGTTTT ATAGATGTTGCTCGCAGCCGTTTTGCTCATATTTTGCCTTTACCTCAACGGGTTATGCATGGGAAAGCATGGACTGTGGG TCCGGAGGTAGCTCAGATTCCTAAAAGCGGGTTGTACATTAGTCCTGTTAGTGCTCCGGAAGAGATTAAGCAATATGATT TGGATAATCAGGATAGTTATGTGGAATTCACCAAACAACTTTTGTGGGAACGAAAGTTACTTGACCTGAGTCTACGTAAT AATTTTCTGAACCTGCGTATTACCCGTAATGCCCTTCAAGTGATCTCTGCGGATATAGATAAGATGGAAGATGCTTTTTC GGACGGAACAGAATTTCAGATTTTGGGTAAGCCCTCTGATTGGGATAATCCGTTGTATGACTTCGGGCTTTATGGCACTT TAACGGAATCGGATCCGATGATTGATTTGATTAAGCAGGAGCTGACTCAAAAAAGATTGAGAACCTATCTTACCGAACAG GATCTGAAGAAATCGCTTACTTATTTATATCGTTCTTCCAGAATAGCATTGGAAGAAAATGGTGCAAATACTTTATATCT TGCCTTGGGGCTGCTGAGGTGGTATGAAACCGAACATAGTGAGCGTCCTCGCTATGCCCCGATATTGTTACTTCCTGTTG AGATGATCCGTAAGTCGGTATCCAAAGGATATATTATCCGTGCCCGTGAAGAAGAGAGTATGCTTAACATTACCTTGTTG GAGATGTTGAGACAAAACTTTGGCATCACTATTTCTGGGCTCGATTCATTGCCGAAAGATGAAAATGGAACCGATGTGAA ACGTATTTTCTCAATCTTTCGGAAAGCTGTGATGAACGAAAAGCGTTGGGACGTAGAAGAACAGGCTATTTTGGGTACTT TTTCATTCAGTAAGTTCATCATGTGGAATGACATTCATTCGAATGCCGAAGAGTTGAGTAAAAATAAGATTGTCGGCAGT TTGATGAGTGGTAAAATGGAATGGGAGGTTGCAGAAGTCGATGCCAATGCCGTAGAACTGGATCATGCTTTAACTCCTGC TGATATTGCGTTGCCTGTCAGTGCCGATTCTTCGCAGCTTGAAGCGGTTTATGAAGCTGTAAATGAGAAAAGCTTTATTT TACATGGACCTCCGGGAACTGGCAAGTCACAAACCATTACGAATATTATAGCCAATGCACTGTATCAGGGTAAACGGGTA TTGTTTGTGGCCGAAAAAATGGCTGCACTCTCCGTAGTTCAGAAAAGGCTTATGAATATAGGTTTAGCTCCGTTCTGCCT GGAACTGCATTCTAATAAAGCACGAAAGACAGATGTACTGAGTCAGCTGAAAGAATCAACTGAGATCTTTCGTTATAAGG AACCGGAAGAGTTTAAGGAAGAGTCGGAAAGGCTGTTTAAAATGCGTCAGCAGATTAATGGATATGTAGAGGCATTACAC CGAATATATCCTTGTGGCATATCTGTCTACGAGGCTATCACCCGTTATAGCTCCATTGACGAAACAGAAGAAATAATGAT ACCCGCTTCTTTGCTTGCTTCGTTGACTAAGGAGCAATTCAATGAATGGAATCATGCTGTGGAAGAGTTGATCGGAGTTG GAAAAGTAAGTGGACATTCCCATCAGCATCCTCTCACAGGAATCAATATAATGGAGTACTCTTCTCAACTGAAAGAAGAA GCGGATAAACTTCTGAAAGACTATATGATTCTGTTGCAGAAGATGGAAGAGAAGATGAATAGATGCTTCTCAAATTATGG AATAGGGAATAAATGCACAGAGAAGCTATTGGATAACTTTGTTCGGTTCATCCGAATCCTAATGCAACTTCCTGGTATGA CCGGTAACTTGATGTTGTTAACCGATCTTGACGAGAATGTTGATAAGATAGGCCGGATCATTGAACATGGACGAAAAAGA GATGAATTTTGCAATCTGCTAAAACAATCATTTGAAGACACTTTTCTCACTTTACCGGTGCAGCAAAAGATCTCGGAATG GAAAGATATTACACAGAGTTGGTTTCTGCCTCGCTTGTTAAAACAACGGAAGTTTTGTAAGGAACTGTCTCTCTTTTCGC TTCAGGGCCGTGTCAATAAAGAACAAGTTCTTCCCGCTTTGCAACAATTGCTCTTTTATCAGCAGCAAAAACAGGAAGTA GATAGCAGTAGTCGTTGGTTTGAGGACTTATTTGGGAATAAATCCCATCCCGGTGAAGAGCAATGGGACGATATAGAAGT GATGAGCAAGGCTATACTCCAATTGAACAGGCTTCTGGTGGAGGTAGTGGATGATCCTATGTCTATACGGCGAGTTAAGG AGAAACTGGCGGAACAACTCTCTGGGGGGTATTCTTTGTTCCGGCAAATGAATCGGGAGTTGTTGGAAGGTTTGGTATAC GACTGGGAGTGTATAAAGCAATTGGAAAAATCGATGTTGCAATTATTGGGCGTTTCCAAAGAGGTGCTTCATGCTTGTGA AGACGACTGGCTGGCAGGAGCGTCACGACAATGTGAGATTTGGGCAAGGAACACGGATAAGTTGAAAGATTGGTATCGTT GGCTGAATGTATCTCGTCGGTTCGAGGCTTGTGGCTTGACTTCTGTATTTGCAGCATATACGGAACGTAACTTGCCTGCC GAACGGATGATGAATATTTATTTGAAAGGGTTTTATCATAGTTTTATTGAATATGCCATCGGGAAGGAGCAGGTTCTGCA ATTTTTTAACGGGGAGCTGTTCAATGACAGTATCCGGCGTTTTCGTGAATTGAATACGGAGTATCAGGAATTAATAAAAA AGGAACTTTATACAAAACTGGCTTCTAATATCCCATCGTTTGTACTTGCGGCTGCCCAAAGTTCGGAGGTTGGTATTTTG CAGAAATGTATTCGCAGTAACGGACGTGGAATGTCTATTCGTAAGTTGTTCGATTCGATTTCCAACTTATTGTCACGTAT GTGTCCGTGTATGCTGATGAGTCCAATGTCAGTAGCGCAGTATATCAATGTGAACCACGATAAGTTTGATTTGGTTGTAT TTGATGAGGCTTCACAGATGCCTACTTGTGAAGCCGTAGGTGCTATTGCCCGTGGAAATCATGTAGTCGTTGTAGGTGAT CCGAAACAAATGCCCCCGACTAATTTCTTTACCAGTAATTCAGTTGATGAAGAACATATAGAGATAGAAGATCTGGAAAG TATCCTGGATGATTGCCTGGCTTTGTCTATGCCTTCTAAATATTTGTTATGGCATTATCGCAGTAAACATGAAAGCCTGA TTGCTTTCAGCAATTCTCAGTATTATGATAATAAGTTGCTGACTTTTCCATCTCCGGATGATCTGGCTGCCAAAGTTACT TTAGTACCCATCGAGGGATATTACGATAAGGGTAAAAGTCGTCAGAATCAAGCTGAGGCACAGGCGGTAGTAGACGAGAT TGTTCGCAGACTTTCCGATCCGGAATTGAGAAATCAGAGTATAGGTGTTGTAACTTTTAGTTCCGTACAGCAGACTTTAA TAGAAGACATGTTATCGGATGTTGTTTTACAGAACGCAGAATTAGAGAATCTTGCATTCAATCGTGAAGAACCTGTTTTT ATTAAGAATCTGGAAAATGTGCAAGGGGATGAACGGGACGTTATTCTTTTTTCTGTAGGTTATGGTCCGGATGTCAACGG AAGGGTGAGTCTCAATTTCGGACCGTTGAATAGGGATGGTGGCGAACGTCGTTTGAATGTGGCAGTGTCACGTGCCCGAT ATGAGATGAAAGTCTTCTCTACATTAAGAGCCGACCAGATTGATCTGAAAAAGACATCTTCTATAGGAGTGGCAGGTTTG AAATATTTCCTTGAATATGCAGGTAAGGGTACCGGAGTTTTGAATCATTCTTATGCAGCGGTATCCGAAGAGGTCGAAAT GGGTGAGCTGATTGCTGCGGCACTTCGTGAAAAAGGACATCAGGTGAAAACCAAAATCGGATGTTCCGGATTCAAAGTAG ATGTAGGTATTATCGATCCTAATGATACCTCCCGTTATATGCTCGGGATTTTGTGTGATGGCGAGAATTATCGGGCTGCA AAAACAGCTCGGGATAGGGAGATTGTGCAAGACAGTGTACTGAAAATGTTGGGATGGAACATTTGTAAAGTATGGACTCT GGATTGGTGGGAAGACTCACAGAAAGTTATTGACCATATAGAGGCGGAATTGAAAAGAGCAGAGTGCGGAAAATCGCAAC GATCCGTTCCGGTGATTTCTTTGGCTTCAGGATCGGGAGAAGTGCAAAAAGAGGGTTTACTATGCCATGCACAACACTGC TTAGTGAAGTTGCCGGAGCTAGTAATTCGGGAAGAAGTGAAGGCTGCGCCACCGGAGATCTATGAAAAAACTCTTTTAAA CTCTGTAAATGTATCTGCTTGGGAATTGATGATGCCACGCCGGGAGCCCCGTATCAGAAAACAATTGAATGAGATCATGC GTACGGAGGCTCCGATTAGCCGTTCATTGTTAAGCAGCAGAATCTTTAATGCTTATGGCATTCTTCGGAAGACAGCTCGC CTGATTGAATGGATGGATGGTATACTGGATAAAACTCCTTATTACAAGCAGGAAATTGATGGATTGGTTTTCTACTGGAA TACCAAGGAAGAAGCAGACTCGTATACCGGATTCCGCATAGACTCCAAGCGTGAAGCCGTAGATTTACCTCCTCGTGAGG TAGCCAATGCGGCTCGGAATATACTGGAACAGCAGGTCGCTTTACCTTTGGTTGACTTAATGCGGGTAACCGCCCAGTTG TTGGGGTATGCACGTTTCGGGTTGAATGTGGAGACTGCCATGCGCAGGGGAGTGCAAATACTGTTGGACGGAGAAGAGGT AAAGATCGAAGGGGGTAAGATACTTATGAAGTAG
Upstream 100 bases:
>100_bases TTTTGTAAATTCTTTAAATTAAAGAGGTCTCCTTTATAAATAAATATGTAATTTTGCCACATGTTATTGTTTGAATGTGA ATTAATTAATCTCGTTTATC
Downstream 100 bases:
>100_bases TCCGATCCGGATCAGTTGCCGTGTTTTCTTGCTGGTAAATTTCATCATTTTTCAATTTATGTCCGCAGTATTTACAATAA GTGGCATTCTCTTCGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1957_residues MSQENPSSQLDVEFIYLPVINYSMQQNRIPVVRLLSIKNNTEHPLADLKVFLTLEPEFASVSPVMVEKLASGEIITITGL NLMLDPSFFIQQTERLSGTIVLVVSDEKNVFFQEKYPVDILAFDQWGGIQVLPELLSAFVVPNHPVLTGVLSRASSILKE WSGNSSLDAYQSCNPNRVKLQLAALYEAIKEQHIAYCTPPSSFGDAGQRVRLSDNVLSGKLGTCLDLSLLYASCAEAMGL HPLLVIIQGHAFVGCWLIDGTFPDAVNDDPSLLTKRTADGINEVILLEATCMTDGNNVTFDTAVGLANDKMLAVNDFTCF IDVARSRFAHILPLPQRVMHGKAWTVGPEVAQIPKSGLYISPVSAPEEIKQYDLDNQDSYVEFTKQLLWERKLLDLSLRN NFLNLRITRNALQVISADIDKMEDAFSDGTEFQILGKPSDWDNPLYDFGLYGTLTESDPMIDLIKQELTQKRLRTYLTEQ DLKKSLTYLYRSSRIALEENGANTLYLALGLLRWYETEHSERPRYAPILLLPVEMIRKSVSKGYIIRAREEESMLNITLL EMLRQNFGITISGLDSLPKDENGTDVKRIFSIFRKAVMNEKRWDVEEQAILGTFSFSKFIMWNDIHSNAEELSKNKIVGS LMSGKMEWEVAEVDANAVELDHALTPADIALPVSADSSQLEAVYEAVNEKSFILHGPPGTGKSQTITNIIANALYQGKRV LFVAEKMAALSVVQKRLMNIGLAPFCLELHSNKARKTDVLSQLKESTEIFRYKEPEEFKEESERLFKMRQQINGYVEALH RIYPCGISVYEAITRYSSIDETEEIMIPASLLASLTKEQFNEWNHAVEELIGVGKVSGHSHQHPLTGINIMEYSSQLKEE ADKLLKDYMILLQKMEEKMNRCFSNYGIGNKCTEKLLDNFVRFIRILMQLPGMTGNLMLLTDLDENVDKIGRIIEHGRKR DEFCNLLKQSFEDTFLTLPVQQKISEWKDITQSWFLPRLLKQRKFCKELSLFSLQGRVNKEQVLPALQQLLFYQQQKQEV DSSSRWFEDLFGNKSHPGEEQWDDIEVMSKAILQLNRLLVEVVDDPMSIRRVKEKLAEQLSGGYSLFRQMNRELLEGLVY DWECIKQLEKSMLQLLGVSKEVLHACEDDWLAGASRQCEIWARNTDKLKDWYRWLNVSRRFEACGLTSVFAAYTERNLPA ERMMNIYLKGFYHSFIEYAIGKEQVLQFFNGELFNDSIRRFRELNTEYQELIKKELYTKLASNIPSFVLAAAQSSEVGIL QKCIRSNGRGMSIRKLFDSISNLLSRMCPCMLMSPMSVAQYINVNHDKFDLVVFDEASQMPTCEAVGAIARGNHVVVVGD PKQMPPTNFFTSNSVDEEHIEIEDLESILDDCLALSMPSKYLLWHYRSKHESLIAFSNSQYYDNKLLTFPSPDDLAAKVT LVPIEGYYDKGKSRQNQAEAQAVVDEIVRRLSDPELRNQSIGVVTFSSVQQTLIEDMLSDVVLQNAELENLAFNREEPVF IKNLENVQGDERDVILFSVGYGPDVNGRVSLNFGPLNRDGGERRLNVAVSRARYEMKVFSTLRADQIDLKKTSSIGVAGL KYFLEYAGKGTGVLNHSYAAVSEEVEMGELIAAALREKGHQVKTKIGCSGFKVDVGIIDPNDTSRYMLGILCDGENYRAA KTARDREIVQDSVLKMLGWNICKVWTLDWWEDSQKVIDHIEAELKRAECGKSQRSVPVISLASGSGEVQKEGLLCHAQHC LVKLPELVIREEVKAAPPEIYEKTLLNSVNVSAWELMMPRREPRIRKQLNEIMRTEAPISRSLLSSRIFNAYGILRKTAR LIEWMDGILDKTPYYKQEIDGLVFYWNTKEEADSYTGFRIDSKREAVDLPPREVANAARNILEQQVALPLVDLMRVTAQL LGYARFGLNVETAMRRGVQILLDGEEVKIEGGKILMK
Sequences:
NA
Specific function: NA
COG id: COG1112
COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA