| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
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The map label for this gene is opuAA
Identifier: 60682641
GI number:
Start: 3716589
End: 3717815
Strand: Reverse
Name: opuAA
Synonym: BF3172
Alternate gene names: NA
Gene position: NA
Preceding gene: 60682642
Following gene: 60682640
Centisome position: NA
GC content: NA
Gene sequence:
>1227_bases ATGAGTAAAATAACGATTAAAGACTTGTATCTCATTTTTGGCAATGACAAACAGCATGCTTTACGCATGTTGAAGGAAGA AAAGAGCAAAAGTGAGATATTGAAGGCTACCGGATGTACGGTGGCCGTAAAAGATGCAAACCTATCTATCCGGGAAGGAG AAATATTTGTGATTATGGGACTTTCGGGAAGTGGAAAATCAACTTTGCTGCGTTGCATCAACCGATTGATAAAACCGACC TCAGGCGAAGTGATCATTAACGGGAGAGATATTTCTAACGTCACTGATAAAGAATTGCTCCGTATCCGAAGAAAAGAGCT GGCTATGGTGTTCCAGCATTTTGGGTTGTTGCCCCATCGCTCGGTGTTGCATAATATAGCTTTCGGACTGGAACTGCAAG GAGTAAAGAAACAGGGGCGGGAGCAGCGGGCAATGGAAAGCATGCAACTGGTAGGACTGAAGGGCTACGAGAACCAGATG GTCGGCGAACTGTCGGGAGGTATGCAGCAACGTGTCGGTTTGGCCCGTGCGTTGGCCAATGATCCTGAGGTGCTGCTGAT GGATGAGGCTTTTTCCGCTCTCGATCCTTTGATTCGCATACAGATGCAGGATGAATTGCTGACTTTACAATCTAAGATGA AGAAGACCATTGTGTTTATTACCCACGATTTGAATGAAGCTATTAAATTGGGCGACCGGATTGCTATCATGAAAGATGGT GAGGTGGTACAGGTAGGCACTTCGGAAGAGATCCTGACAGAACCGGCCAATGCTTATGTAGAGCGCTTTGTGCAGAGTGT GGACCGTAGCAAGATTATTACCGCTGCATCAGTGATGGTAGATAAACCCCTTGTGGCCCGATTGAAGAAAGAGGGACCGG AGGTGTTGATTCGTAAAATGCTCGAGCGTAACCTGACTGTGTTGCCTGTGGTCGATGCAAACAATGTGCTTGTGGGAGAG GTCCGGCTGAAAGATTTGCTCCGATTGCGTCAGGACCAGGTGAAGTCGATCGAGTCGGTTGTCCGGGAGGAAGTGCATTC GGTGTTGGGAGATACGATACTGGAAGATATTTTACCGTTGATGACAAAAACCAATTCGCCTATCTGGGTAGTGAACGAGA CCCGCGAGTTTCAGGGAGTTGTTCCGTTGTCATCGCTTATTTACGAGGTAACCGGAAAGAACAAACAAGAAATCAATGAA ATCATTCAAAATGCAATAGAATTATGA
Upstream 100 bases:
>100_bases TCGCTTCCCCGGCATCAACTTCCTTGCTATAAAGAAGTGCTTGTTTTCGTGTGTATAGGTCACCCGATCTGTTTTTTTAA TAATCTAAACCCTATTATGT
Downstream 100 bases:
>100_bases TCAACATAGGACAATATATTGAGATGCTCATCAACTGGATGATGATACACTTCTCCACTTTTTTCGATGCACTCAACTTA GGCATCGGTAGTTTTATTAA
Product: putative glycine betaine transport ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>408_residues MSKITIKDLYLIFGNDKQHALRMLKEEKSKSEILKATGCTVAVKDANLSIREGEIFVIMGLSGSGKSTLLRCINRLIKPT SGEVIINGRDISNVTDKELLRIRRKELAMVFQHFGLLPHRSVLHNIAFGLELQGVKKQGREQRAMESMQLVGLKGYENQM VGELSGGMQQRVGLARALANDPEVLLMDEAFSALDPLIRIQMQDELLTLQSKMKKTIVFITHDLNEAIKLGDRIAIMKDG EVVQVGTSEEILTEPANAYVERFVQSVDRSKIITAASVMVDKPLVARLKKEGPEVLIRKMLERNLTVLPVVDANNVLVGE VRLKDLLRLRQDQVKSIESVVREEVHSVLGDTILEDILPLMTKTNSPIWVVNETREFQGVVPLSSLIYEVTGKNKQEINE IIQNAIEL
Sequences:
NA
Specific function: NA
COG id: COG4175
COG function: function code E; ABC-type proline/glycine betaine transport system, ATPase component
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA