Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60681488

GI number:

Start: 2341802

End: 2343985

Strand: Direct

Name: Not Available

Synonym: BF2000

Alternate gene names: NA

Gene position: NA

Preceding gene: 60681487

Following gene: 60681516

Centisome position: NA

GC content: NA

Gene sequence:

>2184_bases
ATGATATTAAAAAAAACAAACGATAAGGGAGCATTGTTATTTGCTCTGTTTATTTTATTGGCAGGAGGCAGCAGAGCAAG
ACAACATAGGAAAGATGATCATGTCATTCGTGGTAAGCAGGTTGCTGTTTTTGGGCGTAATATATTTACTGCCAGAAATT
TATCTTTTGAGCCTAGCCTGGGTATTCCTACTCCTGAAAATTATGTATTAGGTTCTGGAGATGAATTGATAATAGACGTA
TGGGGTGCTTCTGAAAATACAGTCAGGGAAATAATTTCTCCTGAAGGTACTATTCATGTGGCAGGTATAGGTCCCATTTT
CCTGAGTGGAATGAATATACAGGATGCCGAACGAAGTTTGAGACGTGAGTTTAGTAAGATTTATGCTGCTATTCCTCAAA
AAACGGTCCATATAGAGTTATCGTTGGGGAGAATCCGTACCATCATGATCAATGTCATGGGTGAAGTAAAAGTACCCGGT
ATTTATCGGTTGTCGGCATTTGCATCGGTATTTCATGCTTTGTATCGTGCCGGTGGAATCAGTGATATCGGAAGCCTGCG
TGATATTCGTGTTGTGAGAGATGGAAAGGAGATCGCCCGTGTCGATGTATATGATTATATTATGAAAGGTAAATTGACGG
ATAATATCCGTTTATCGGAAGGCGATGTCATTTTAGTTCCTCCTTATCAGAATCTGGTAAGTATTTCCGGAAAGGTAAAA
CGTCCGATGAAGTATGAAATGAAAAGTGGGGAAACCGTAGCTACTTTGTTGAGTTATGCGGGAGGTTTTACGGGAGATGC
TTATCGGAGTGCCATACGTTTGTTTCGTATGGGCGGAAAAGCAAAACAGGTATACAATGTGGCGCAGGACGATTATCAGT
CTTATCTTCTGGCCGATGGTGATAAATTATCCGTTGAAGCGGTATTGGAACGTTTCTCAAACAAGGTCGAAATTCGTGGC
GCTGTATATCGTGCGGGCATATATCAATTGGATGATAGTGTAACAGGAACTGTCAGGCAGTTGATTAGCAAAGCGGAAGG
ACTTCGGGGAGACGCTTTTCTTAACAGGGCTTTGTTGAGACGCCAACAGGAAGATCTGACACATGAAATGATTCCTGTCG
ATTTGAAAAAAATGATGGATGACACATCCGCCGACCTATGTTTGCAGAAGAATGATGTCCTCTACATTCCCAGTGTGAAA
GATATTGAGAAAGAAGGAACTTTGTCCATTTATGGTGATGTAAGGGTACCGGGTGAGTTTCCTTATGTTAAAAATACGAC
TATACAGGATTTGATTGTAAAAGCGGGAGGATTGCCGGAATCTGCTTCTATGGTCCGGATCGATGTGTCGCGTCGAATCA
AAGATCCTGGAAGTATACTATCCTCCAATGTTATTGGAAAGAGTTTTACGGTTGAGCTTGCAAACGGATTGTTGATAGGG
GAGGATAAAGGATTTGAACTGGAACCTTATGATATCGTTTTCGTTCGTCGAAGTCCGGGGTATCGCAAACAGGCCAATGT
AACAGTTGAAGGAGAAGTGGTTTTCACCGGTAATTACGCATTAACCAAAAGCAATGAAAGGCTGAGTAGTCTGATAGCAA
GAGCCGGAGGATTATCGAAAGAAGCTTATGTGAGAGGAGCACGTCTGATACGTAGAATGACAGCGGATGAGATAAGGCGG
AAACAGGATGTAGTACGTTTGTTGGTCAAGGGGAGTGAAGAAAATTCTATATCTCCGGTCGCTTTGGAAACCGGTTCTAC
TTATCCGGTAGGCATAGAACTCGAGAAAGCGTTAATAAATCCGGGTTCTGACGAAGATATGGTCTTGCGTGAAGGAGATG
TACTATTTATTCCCAAATATGTCAGTACGGTAACAATCAGTGGGGCCGTGATGTATCCTAATACAATACTTTATCAAAAG
GGGAGTAATCTTGACTATTACATTGAACAGGCCGGCGGCTTCGGAAACCGGGCACTGAAGCGACATATTTATGTAGTATA
TATGAACGGAATGGTGTCTCGTCTGAGAAAGAGTGCGGTTTGTGCAATTGAACCAGGATGTGAAATAATAGTACCAAGCA
AAGAAAATAGGAAAAAGACTGTGCCGAGGGACGTTGCAGGAATGAATACTTCTATTGCCTCTATCGCTGCAATGGTGGCT
GCCATGGTCGGTATGATAAAGTAA

Upstream 100 bases:

>100_bases
TTACGGGGAAGAGGTTTCAAATTTTTGCTCCCTTATGAAAAGTGAAATATTTGTGCGATTTGTGTCTTGTGTCGCAAAAA
AAGTAAGCTGTCTGAAGGAT

Downstream 100 bases:

>100_bases
TATAATCATAATAAAAAGTAATCTTGTGGTTTAACGTTACATTATGGCCGAATTAGACTATTTTAATCGTGAAAAATTAG
TATAATAAAGTGGTGTTGGA

Product: putative polysialic acid capsule transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>727_residues
MILKKTNDKGALLFALFILLAGGSRARQHRKDDHVIRGKQVAVFGRNIFTARNLSFEPSLGIPTPENYVLGSGDELIIDV
WGASENTVREIISPEGTIHVAGIGPIFLSGMNIQDAERSLRREFSKIYAAIPQKTVHIELSLGRIRTIMINVMGEVKVPG
IYRLSAFASVFHALYRAGGISDIGSLRDIRVVRDGKEIARVDVYDYIMKGKLTDNIRLSEGDVILVPPYQNLVSISGKVK
RPMKYEMKSGETVATLLSYAGGFTGDAYRSAIRLFRMGGKAKQVYNVAQDDYQSYLLADGDKLSVEAVLERFSNKVEIRG
AVYRAGIYQLDDSVTGTVRQLISKAEGLRGDAFLNRALLRRQQEDLTHEMIPVDLKKMMDDTSADLCLQKNDVLYIPSVK
DIEKEGTLSIYGDVRVPGEFPYVKNTTIQDLIVKAGGLPESASMVRIDVSRRIKDPGSILSSNVIGKSFTVELANGLLIG
EDKGFELEPYDIVFVRRSPGYRKQANVTVEGEVVFTGNYALTKSNERLSSLIARAGGLSKEAYVRGARLIRRMTADEIRR
KQDVVRLLVKGSEENSISPVALETGSTYPVGIELEKALINPGSDEDMVLREGDVLFIPKYVSTVTISGAVMYPNTILYQK
GSNLDYYIEQAGGFGNRALKRHIYVVYMNGMVSRLRKSAVCAIEPGCEIIVPSKENRKKTVPRDVAGMNTSIASIAAMVA
AMVGMIK

Sequences:
NA

Specific function: NA

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA