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The map label for this gene is glnD

Identifier: 59712571

GI number: 59712571

Start: 2193968

End: 2196589

Strand: Direct

Name: glnD

Synonym: VF_1964

Alternate gene names: 59712571

Gene position: 2193968-2196589 (Clockwise)

Preceding gene: 59712570

Following gene: 59712572

Centisome position: 75.72

GC content: 40.27

Gene sequence:

>2622_bases
ATGAAATATCTATCCCCCCTATCCTTATCCGATACTCAGCTTAATATTACCGAACTAAAGCAACAACTTACTCTTTTCTC
CCAATACCAAATTAACGCTTTTCATCAGCACAAAGCCGTTTCAGATTTAGTACTTGAACGATCTCACTATTTTGATCAAT
TACTCTCTCGACTGTGGCAATTCTTTAAATTTGATGACATCGCAAATACATCCCTGATCGCCGTCGGTGGTTATGGTCGG
AGTGAACTTCATCCTCTTTCAGATATTGATATTCTGATTTTAACTGAGAACAATACCAATGATGCATTTTGCCAAAAAGT
AGGAGAGTTAGTCACTCTACTTTGGGACTTAAAATTAGAAGTTGGCCATAGCGTTCGTTCAATAGCAGAGTGCATAGAAA
TAGGTCAGAATGATTTAACTGTAGCGACTAACTTACAAGAAGCTCGCTACATCAGTGGTAATAAAGAACTGTCCCACCAA
CTAAAATTAAAAATACATTCGGACAGTTTCTGGCCAAGTGAGTTGTTTTATCAAGCTAAAATAGACGAACAGAAAAAACG
TCACAGCCGTTACCATGACACTACATACAACTTAGAACCTGACATAAAATCAAGTCCAGGTGGGTTGAGAGACATTCATA
CCCTAAGTTGGATTGCTCGACGCCACTTTGGAGCAACGTCTCTACTTGAGATGAGTCAGGCCGGTTTCTTAACCGATGCG
GAATATCGCGAATTATTAGAATGCCAAGAGTTCTTATGGCGTGTTCGCTTTGCTCTGCATATTGAACTGAAGCGATACGA
CAATCGACTCACCTTTGGTCACCAAGCTTCCGTTGCTGAGCATTTAGGTTTTATTGGTGAAGGAAATCGCGGTGTAGAGC
GTATGATGAAAGAGTTCTATCGAACTTTACGTCGTGTTGCTGAGCTAAATAGCATGTTGCTCAAAATTTTTGACCAAGCA
ATCCTTCATCAAGGTGAGCAAGACGATGCCATTATCATCGATGATGATTTCCAACGCCGTGGACGATTAATTGAAGCTCG
AAAGCCTGCTCTATTTCAAGCTCGTCCAGACACCATATTAGACATGTTTTTATTAATGGCGAACGACTCAACCATTGACG
GAGTTGCTCCTCCTACCATGCGTCAATTACGAACCGCTCGACGTCGCCTTAATCGTTTTTTATGTGAAATACCTGAAGCC
AAAGAAAAATTTCTACAATTAACTCAGCATCCAAATGCATTAAACAATGCCTTTAGTTCCATGCATAAATTAGGGGTTCT
TTCTGCTTACTTACCTCAATGGAGCCATATTGTAGGACAAATGCAATTTGATTTATTTCATGCTTATACGGTTGATGAGC
ACAGCATTCGTCTGCTTAAGCATATTAATAAATTTTCGGATACTACAAACCGAGATAAACACCCTATCTGTTGTGAAATC
TTCCCTAAAATAATGAAAAAAGAGTTACTTATCATAGCTGCCATTTTTCATGATATAGCAAAAGGCCGCGGGGGCGATCA
CTCTGAATTAGGTGCCGTAGATGCCTATGATTTTTGTATTAGTCACGGACTATCAAAACCGGAAGCCAATTTAGTTTCTT
GGCTCGTAAAAAGCCACCTACTCATGTCTGTTACAGCACAACGTCGTGATATTTACGATCCCGATGTGATTACTGAGTTC
GCCAAACAAGTTAGGGATGAAGAACGTTTAGATTACTTAGTGTGTTTAACTGTTGCAGATATCTGTGCGACTAATCCGGA
TTTATGGAACAGTTGGAAACGCTCACTTATCGCGGATTTATATAATGCCACCCAACGAGCACTGAGAAGAGGTTTAGAGA
ACCCGCCAGACTTACGAGATCGTATTCGCCACAATCAACAAATGGCTTCAGCACAGCTTCGTAGTGAAGGCTTCACACAG
TGGGAAGTCGATGCTCTATGGCGTCGATTTAAAGCGGATTATTTCTTACGTCATACTCATAAACAAATTGCATGGCATGC
TAGCCATCTTCTTCGTCATCAAGATAAAGAAAAATCATTAATACTCATCAGTAAAAACGCTTCTCGTGGAGGAACTGAAA
TTTTTGTTTACAGTAAAGATCAACCACACCTTTTTGCTACTGTAGCAGCAGAGTTGGATAGACGTAGTATCACTATTTAT
GATGCTCAAGTTATGTCCAGCAAAGATGGGTATGCGCTCGATACCTTTATGGTTCTTGACCAAAATGATGACCCTATTGA
TGAAGAACGACAACAAAGATTAATTGATCAACTTTACGACGTTAAACTAAATGACCAAGCAACGCACATTAAAACCCGTC
GACCGCCACGCCAGCTTCAACATTTTAATGTGAAAACTCGCATGGAGTTTTTACCAACTAAAACAGGGAAAAGGACATTA
ATGGAGTTTGTTGCATTAGATACTCCAGGGTTATTAGCGACGGTTGGTGCCACATTTGCTCAATTAGGGATCAATTTACA
TGCCGCAAAGATCACCACAATTGGTGAGCGAGCTGAGGATTTATTCATCCTAACATCTGACGTTGGTGGTCGACTTGACG
ACGAAAAACAAGCAGAGCTTGAATTAGCCTTAGTTAAAAATGTAGCGAGATTAAGCTCATAA

Upstream 100 bases:

>100_bases
CGTGCTGAAGAAACCATTCCTCGCCACATGAACAACAAATAACAAATCGCAAATAAACAGAAGGCTTCGGTCTTCTGTTT
TTTTATCAGCAAGGATTGCT

Downstream 100 bases:

>100_bases
TACGAATAACTAAAAACAATAAGTGGGATGGATAAGATCTATCCCACAACTTTCATTCACAGCAGTTGTTATATCGACTC
TCATCGTTAATGCTCATTTA

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme

Number of amino acids: Translated: 873; Mature: 873

Protein sequence:

>873_residues
MKYLSPLSLSDTQLNITELKQQLTLFSQYQINAFHQHKAVSDLVLERSHYFDQLLSRLWQFFKFDDIANTSLIAVGGYGR
SELHPLSDIDILILTENNTNDAFCQKVGELVTLLWDLKLEVGHSVRSIAECIEIGQNDLTVATNLQEARYISGNKELSHQ
LKLKIHSDSFWPSELFYQAKIDEQKKRHSRYHDTTYNLEPDIKSSPGGLRDIHTLSWIARRHFGATSLLEMSQAGFLTDA
EYRELLECQEFLWRVRFALHIELKRYDNRLTFGHQASVAEHLGFIGEGNRGVERMMKEFYRTLRRVAELNSMLLKIFDQA
ILHQGEQDDAIIIDDDFQRRGRLIEARKPALFQARPDTILDMFLLMANDSTIDGVAPPTMRQLRTARRRLNRFLCEIPEA
KEKFLQLTQHPNALNNAFSSMHKLGVLSAYLPQWSHIVGQMQFDLFHAYTVDEHSIRLLKHINKFSDTTNRDKHPICCEI
FPKIMKKELLIIAAIFHDIAKGRGGDHSELGAVDAYDFCISHGLSKPEANLVSWLVKSHLLMSVTAQRRDIYDPDVITEF
AKQVRDEERLDYLVCLTVADICATNPDLWNSWKRSLIADLYNATQRALRRGLENPPDLRDRIRHNQQMASAQLRSEGFTQ
WEVDALWRRFKADYFLRHTHKQIAWHASHLLRHQDKEKSLILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIY
DAQVMSSKDGYALDTFMVLDQNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKTRMEFLPTKTGKRTL
MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTSDVGGRLDDEKQAELELALVKNVARLSS

Sequences:

>Translated_873_residues
MKYLSPLSLSDTQLNITELKQQLTLFSQYQINAFHQHKAVSDLVLERSHYFDQLLSRLWQFFKFDDIANTSLIAVGGYGR
SELHPLSDIDILILTENNTNDAFCQKVGELVTLLWDLKLEVGHSVRSIAECIEIGQNDLTVATNLQEARYISGNKELSHQ
LKLKIHSDSFWPSELFYQAKIDEQKKRHSRYHDTTYNLEPDIKSSPGGLRDIHTLSWIARRHFGATSLLEMSQAGFLTDA
EYRELLECQEFLWRVRFALHIELKRYDNRLTFGHQASVAEHLGFIGEGNRGVERMMKEFYRTLRRVAELNSMLLKIFDQA
ILHQGEQDDAIIIDDDFQRRGRLIEARKPALFQARPDTILDMFLLMANDSTIDGVAPPTMRQLRTARRRLNRFLCEIPEA
KEKFLQLTQHPNALNNAFSSMHKLGVLSAYLPQWSHIVGQMQFDLFHAYTVDEHSIRLLKHINKFSDTTNRDKHPICCEI
FPKIMKKELLIIAAIFHDIAKGRGGDHSELGAVDAYDFCISHGLSKPEANLVSWLVKSHLLMSVTAQRRDIYDPDVITEF
AKQVRDEERLDYLVCLTVADICATNPDLWNSWKRSLIADLYNATQRALRRGLENPPDLRDRIRHNQQMASAQLRSEGFTQ
WEVDALWRRFKADYFLRHTHKQIAWHASHLLRHQDKEKSLILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIY
DAQVMSSKDGYALDTFMVLDQNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKTRMEFLPTKTGKRTL
MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTSDVGGRLDDEKQAELELALVKNVARLSS
>Mature_873_residues
MKYLSPLSLSDTQLNITELKQQLTLFSQYQINAFHQHKAVSDLVLERSHYFDQLLSRLWQFFKFDDIANTSLIAVGGYGR
SELHPLSDIDILILTENNTNDAFCQKVGELVTLLWDLKLEVGHSVRSIAECIEIGQNDLTVATNLQEARYISGNKELSHQ
LKLKIHSDSFWPSELFYQAKIDEQKKRHSRYHDTTYNLEPDIKSSPGGLRDIHTLSWIARRHFGATSLLEMSQAGFLTDA
EYRELLECQEFLWRVRFALHIELKRYDNRLTFGHQASVAEHLGFIGEGNRGVERMMKEFYRTLRRVAELNSMLLKIFDQA
ILHQGEQDDAIIIDDDFQRRGRLIEARKPALFQARPDTILDMFLLMANDSTIDGVAPPTMRQLRTARRRLNRFLCEIPEA
KEKFLQLTQHPNALNNAFSSMHKLGVLSAYLPQWSHIVGQMQFDLFHAYTVDEHSIRLLKHINKFSDTTNRDKHPICCEI
FPKIMKKELLIIAAIFHDIAKGRGGDHSELGAVDAYDFCISHGLSKPEANLVSWLVKSHLLMSVTAQRRDIYDPDVITEF
AKQVRDEERLDYLVCLTVADICATNPDLWNSWKRSLIADLYNATQRALRRGLENPPDLRDRIRHNQQMASAQLRSEGFTQ
WEVDALWRRFKADYFLRHTHKQIAWHASHLLRHQDKEKSLILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIY
DAQVMSSKDGYALDTFMVLDQNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKTRMEFLPTKTGKRTL
MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTSDVGGRLDDEKQAELELALVKNVARLSS

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family

Homologues:

Organism=Escherichia coli, GI1786363, Length=856, Percent_Identity=53.7383177570093, Blast_Score=950, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLND_VIBF1 (Q9XC07)

Other databases:

- EMBL:   AF152563
- EMBL:   CP000020
- RefSeq:   YP_205347.1
- ProteinModelPortal:   Q9XC07
- SMR:   Q9XC07
- STRING:   Q9XC07
- GeneID:   3279229
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1964
- NMPDR:   fig|312309.3.peg.1964
- eggNOG:   COG2844
- HOGENOM:   HBG687872
- OMA:   MQHDLFH
- PhylomeDB:   Q9XC07
- ProtClustDB:   PRK05007
- BioCyc:   VFIS312309:VF1964-MONOMER
- HAMAP:   MF_00277
- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546
- PANTHER:   PTHR13734:SF1
- PIRSF:   PIRSF006288
- SMART:   SM00471
- TIGRFAMs:   TIGR01693

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2

EC number: =2.7.7.59

Molecular weight: Translated: 100600; Mature: 100600

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLSPLSLSDTQLNITELKQQLTLFSQYQINAFHQHKAVSDLVLERSHYFDQLLSRLWQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFKFDDIANTSLIAVGGYGRSELHPLSDIDILILTENNTNDAFCQKVGELVTLLWDLKLE
HHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VGHSVRSIAECIEIGQNDLTVATNLQEARYISGNKELSHQLKLKIHSDSFWPSELFYQAK
HCHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCHHCCCEEEEEEECCCCCHHHHHHHHH
IDEQKKRHSRYHDTTYNLEPDIKSSPGGLRDIHTLSWIARRHFGATSLLEMSQAGFLTDA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCH
EYRELLECQEFLWRVRFALHIELKRYDNRLTFGHQASVAEHLGFIGEGNRGVERMMKEFY
HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH
RTLRRVAELNSMLLKIFDQAILHQGEQDDAIIIDDDFQRRGRLIEARKPALFQARPDTIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCEECCCCCCCCCCCCHHHH
DMFLLMANDSTIDGVAPPTMRQLRTARRRLNRFLCEIPEAKEKFLQLTQHPNALNNAFSS
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
MHKLGVLSAYLPQWSHIVGQMQFDLFHAYTVDEHSIRLLKHINKFSDTTNRDKHPICCEI
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FPKIMKKELLIIAAIFHDIAKGRGGDHSELGAVDAYDFCISHGLSKPEANLVSWLVKSHL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
LMSVTAQRRDIYDPDVITEFAKQVRDEERLDYLVCLTVADICATNPDLWNSWKRSLIADL
HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YNATQRALRRGLENPPDLRDRIRHNQQMASAQLRSEGFTQWEVDALWRRFKADYFLRHTH
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
KQIAWHASHLLRHQDKEKSLILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIY
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEHHHHHHHCCCEEEEE
DAQVMSSKDGYALDTFMVLDQNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQ
EHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHH
HFNVKTRMEFLPTKTGKRTLMEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAED
HCCHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEEEEHHCCCCE
LFILTSDVGGRLDDEKQAELELALVKNVARLSS
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYLSPLSLSDTQLNITELKQQLTLFSQYQINAFHQHKAVSDLVLERSHYFDQLLSRLWQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFKFDDIANTSLIAVGGYGRSELHPLSDIDILILTENNTNDAFCQKVGELVTLLWDLKLE
HHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VGHSVRSIAECIEIGQNDLTVATNLQEARYISGNKELSHQLKLKIHSDSFWPSELFYQAK
HCHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCHHCCCEEEEEEECCCCCHHHHHHHHH
IDEQKKRHSRYHDTTYNLEPDIKSSPGGLRDIHTLSWIARRHFGATSLLEMSQAGFLTDA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCH
EYRELLECQEFLWRVRFALHIELKRYDNRLTFGHQASVAEHLGFIGEGNRGVERMMKEFY
HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH
RTLRRVAELNSMLLKIFDQAILHQGEQDDAIIIDDDFQRRGRLIEARKPALFQARPDTIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCEECCCCCCCCCCCCHHHH
DMFLLMANDSTIDGVAPPTMRQLRTARRRLNRFLCEIPEAKEKFLQLTQHPNALNNAFSS
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
MHKLGVLSAYLPQWSHIVGQMQFDLFHAYTVDEHSIRLLKHINKFSDTTNRDKHPICCEI
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FPKIMKKELLIIAAIFHDIAKGRGGDHSELGAVDAYDFCISHGLSKPEANLVSWLVKSHL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
LMSVTAQRRDIYDPDVITEFAKQVRDEERLDYLVCLTVADICATNPDLWNSWKRSLIADL
HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YNATQRALRRGLENPPDLRDRIRHNQQMASAQLRSEGFTQWEVDALWRRFKADYFLRHTH
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
KQIAWHASHLLRHQDKEKSLILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIY
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEHHHHHHHCCCEEEEE
DAQVMSSKDGYALDTFMVLDQNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQ
EHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHH
HFNVKTRMEFLPTKTGKRTLMEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAED
HCCHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEEEEHHCCCCE
LFILTSDVGGRLDDEKQAELELALVKNVARLSS
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA