Click here to switch to the map view.

The map label for this gene is 59712531

Identifier: 59712531

GI number: 59712531

Start: 2153060

End: 2153488

Strand: Direct

Name: 59712531

Synonym: VF_1924

Alternate gene names: NA

Gene position: 2153060-2153488 (Clockwise)

Preceding gene: 59712530

Following gene: 59712533

Centisome position: 74.31

GC content: 39.16

Gene sequence:

>429_bases
ATGGAATCAGTTGCAATGAGCGCAGAGACTAAGCGCTACCGTTTACTTGCTTTATTTTGTAATTTATCTCTACTTGGCTT
TATTATCCTTTGGCATAGTCTACTTTCACCGCACCCTTTAATTAACTCATATGGCGTTACGATTGCTTGGGTCATTCCCA
TGCTATTCCCATTAAAAGGAATCATTGAAGGAAAGCCTTACACACATGCTTGGGCGAACTTTATTTTAATGTTCTATTTC
CTACATGCGTTAACAATCTTATGGCTAGACGAAGGGGAACGCTACCTAGCGGCTATTGAATTGGTTTTAACCACAGGAGC
CTTCTTAGGCAATATTTACTACGCTCGTCTAAGAGGCAAAGAATTAGGGTTAAAACTTAAACGGTTATCTGAAGTCGAAA
AGCTAGAGAAAGAAAAGTTCACAGAATGA

Upstream 100 bases:

>100_bases
GGACGCCCACCAGAGCAAGTGCTAGAGATTTTATAAGGAATACCAACCTAAGTAAGTAGCCACACACTTACTTAGGTTGA
CATAAAAACAAGGAATGAAC

Downstream 100 bases:

>100_bases
GACCAATCACAGTAAGAGATCAGAGATAGCGAAAGAAAAAAGGTGACTATGCAGTCACCTTTTTTATCATCAATATTATT
TGCTACTCAATTGATAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MESVAMSAETKRYRLLALFCNLSLLGFIILWHSLLSPHPLINSYGVTIAWVIPMLFPLKGIIEGKPYTHAWANFILMFYF
LHALTILWLDEGERYLAAIELVLTTGAFLGNIYYARLRGKELGLKLKRLSEVEKLEKEKFTE

Sequences:

>Translated_142_residues
MESVAMSAETKRYRLLALFCNLSLLGFIILWHSLLSPHPLINSYGVTIAWVIPMLFPLKGIIEGKPYTHAWANFILMFYF
LHALTILWLDEGERYLAAIELVLTTGAFLGNIYYARLRGKELGLKLKRLSEVEKLEKEKFTE
>Mature_142_residues
MESVAMSAETKRYRLLALFCNLSLLGFIILWHSLLSPHPLINSYGVTIAWVIPMLFPLKGIIEGKPYTHAWANFILMFYF
LHALTILWLDEGERYLAAIELVLTTGAFLGNIYYARLRGKELGLKLKRLSEVEKLEKEKFTE

Specific function: Unknown

COG id: COG3308

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16365; Mature: 16365

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVAMSAETKRYRLLALFCNLSLLGFIILWHSLLSPHPLINSYGVTIAWVIPMLFPLKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH
IIEGKPYTHAWANFILMFYFLHALTILWLDEGERYLAAIELVLTTGAFLGNIYYARLRGK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
ELGLKLKRLSEVEKLEKEKFTE
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESVAMSAETKRYRLLALFCNLSLLGFIILWHSLLSPHPLINSYGVTIAWVIPMLFPLKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH
IIEGKPYTHAWANFILMFYFLHALTILWLDEGERYLAAIELVLTTGAFLGNIYYARLRGK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
ELGLKLKRLSEVEKLEKEKFTE
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA