| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711449
Identifier: 59711449
GI number: 59711449
Start: 929680
End: 930747
Strand: Reverse
Name: 59711449
Synonym: VF_0842
Alternate gene names: NA
Gene position: 930747-929680 (Counterclockwise)
Preceding gene: 59711450
Following gene: 59711448
Centisome position: 32.12
GC content: 39.51
Gene sequence:
>1068_bases GTGACTCAATATAAAAATGACCCATTTAACGCATTAGAAGCAAAAACAGAAGCTCAAAAACTTTCTTTTGCTCCTATTGT TTTTCATACAGCTCGAACGCTTAGAGATCTTGGTATTCTAGCGGCTTTAGATAAAGCTCAAGATCAAGGTTTAGATGCTG AGCAATTAGCACAAGAAACGGGTGTATCTGAATATGGCGTGAAAGTCTTACTTGATATGGCATTAAGTGCGCACATTGTT ACTTGGAATAAACCAAACTATGTTCTTGCGAACCTTGGGCACTTCTTATTACACGATGGGATGACGAACGCTAACTTAGA CTTTACAGCTGATGTTTGTTATGCCGCTATGATGCATCTTACAGAGGCAATTCAAGAAGGCACACCTGCCGGCTTAAAAG AGTTAGGTGACTGGCCAACGATTTATGAAGGTTTGTCTCGATTACCAGAAAAAGCCAAAGAGAGCTGGTTTAAGTTTGAT CACTTCTATTCTGACCGTTCGTTCCCAATCTTATTAGAAAAAGTATTAAGCCAAAAACCAAAGCGTTTGTTTGATATCGG CGGCAACACGGGTAAATGGGCACTACAATGCTGTAATTACGATAACGATGTTGAAGTAACAATCATTGACCTTCCACAAC AAATCGAAATGGCGTTAAAAAATGCCAAAGAACAAGGTTTTGCCGACCGTATTAATGGTCACCCAACTAATATGCTTGAT AAGACTCTACCATTACCTCAAGGCGCAGACGTATGGTGGATGAGCCAATTCCTAGATTGTTTCTCTCCAATGGAAATTTT AAGCATTTTAAAACGTGTACGTGCAGCCATGTCTACCGATGCGAAAGTGTATATTTTAGAGCTATTTTGGGATGCGCAAA AATACGATGCTGCTTCGTTTAGCCTAAATGCAACCTCTCTATACTTCACTTGTTTAGCCAATGGTAATAGTCGTTTCTAT CGTTGTAGTGATTTCTTAGAAATTATTGAAGAAGCGGGTTTTGCTGTTGCTGAGCAAACAGACAATATTGGCTTAGGCCA CACATTACTTGAACTTCGTGCTAAGTAA
Upstream 100 bases:
>100_bases CATTCTCTCTTATATATCAGTGGTTTCTTGCTTTTGAACAAAGTTTCACTCAATACCACTGATATGATCATTTTATTATC TTCAACTATGGTTAATCTCT
Downstream 100 bases:
>100_bases GTCTGTTTTTAAATAAAAATCACTTATAAATATAATAATATCCTCACCACTTTAGGTTACTGATACCTAAAGTGGTGCTT TTGTCTCTAAGGAGCACTTG
Product: putative O-methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Type; O-Methyltransferase Family Protein; Methyltransferase; C-20 Methyltransferase BchU; SAM-Dependent O-Methyltransferase
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTQYKNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAQDQGLDAEQLAQETGVSEYGVKVLLDMALSAHIV TWNKPNYVLANLGHFLLHDGMTNANLDFTADVCYAAMMHLTEAIQEGTPAGLKELGDWPTIYEGLSRLPEKAKESWFKFD HFYSDRSFPILLEKVLSQKPKRLFDIGGNTGKWALQCCNYDNDVEVTIIDLPQQIEMALKNAKEQGFADRINGHPTNMLD KTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSTDAKVYILELFWDAQKYDAASFSLNATSLYFTCLANGNSRFY RCSDFLEIIEEAGFAVAEQTDNIGLGHTLLELRAK
Sequences:
>Translated_355_residues MTQYKNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAQDQGLDAEQLAQETGVSEYGVKVLLDMALSAHIV TWNKPNYVLANLGHFLLHDGMTNANLDFTADVCYAAMMHLTEAIQEGTPAGLKELGDWPTIYEGLSRLPEKAKESWFKFD HFYSDRSFPILLEKVLSQKPKRLFDIGGNTGKWALQCCNYDNDVEVTIIDLPQQIEMALKNAKEQGFADRINGHPTNMLD KTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSTDAKVYILELFWDAQKYDAASFSLNATSLYFTCLANGNSRFY RCSDFLEIIEEAGFAVAEQTDNIGLGHTLLELRAK >Mature_354_residues TQYKNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAQDQGLDAEQLAQETGVSEYGVKVLLDMALSAHIVT WNKPNYVLANLGHFLLHDGMTNANLDFTADVCYAAMMHLTEAIQEGTPAGLKELGDWPTIYEGLSRLPEKAKESWFKFDH FYSDRSFPILLEKVLSQKPKRLFDIGGNTGKWALQCCNYDNDVEVTIIDLPQQIEMALKNAKEQGFADRINGHPTNMLDK TLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSTDAKVYILELFWDAQKYDAASFSLNATSLYFTCLANGNSRFYR CSDFLEIIEEAGFAVAEQTDNIGLGHTLLELRAK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39885; Mature: 39754
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYKNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAQDQGLDAEQLAQET CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC GVSEYGVKVLLDMALSAHIVTWNKPNYVLANLGHFLLHDGMTNANLDFTADVCYAAMMHL CCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TEAIQEGTPAGLKELGDWPTIYEGLSRLPEKAKESWFKFDHFYSDRSFPILLEKVLSQKP HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC KRLFDIGGNTGKWALQCCNYDNDVEVTIIDLPQQIEMALKNAKEQGFADRINGHPTNMLD HHHHCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCCHHHH KTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSTDAKVYILELFWDAQKYDAASF HCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCCCCE SLNATSLYFTCLANGNSRFYRCSDFLEIIEEAGFAVAEQTDNIGLGHTLLELRAK EECCCEEEEEEEECCCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCC >Mature Secondary Structure TQYKNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAQDQGLDAEQLAQET CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC GVSEYGVKVLLDMALSAHIVTWNKPNYVLANLGHFLLHDGMTNANLDFTADVCYAAMMHL CCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TEAIQEGTPAGLKELGDWPTIYEGLSRLPEKAKESWFKFDHFYSDRSFPILLEKVLSQKP HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC KRLFDIGGNTGKWALQCCNYDNDVEVTIIDLPQQIEMALKNAKEQGFADRINGHPTNMLD HHHHCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCCHHHH KTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSTDAKVYILELFWDAQKYDAASF HCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCCCCE SLNATSLYFTCLANGNSRFYRCSDFLEIIEEAGFAVAEQTDNIGLGHTLLELRAK EECCCEEEEEEEECCCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA