Click here to switch to the map view.

The map label for this gene is yaeB [H]

Identifier: 59711290

GI number: 59711290

Start: 746378

End: 747091

Strand: Reverse

Name: yaeB [H]

Synonym: VF_0683

Alternate gene names: 59711290

Gene position: 747091-746378 (Counterclockwise)

Preceding gene: 59711291

Following gene: 172087674

Centisome position: 25.78

GC content: 40.9

Gene sequence:

>714_bases
ATGAAAAATAGCCTAATGACTTATCACATCAACCCTATTGGTTTTATTCAATCTCCTTACAAAGAAAAATTTGCGGTACC
TCGTCAACCTCGTTTGGCTCCAAGTGCCACATCAAGAATTAAACTCGTCGGTGAGGCTAATTCACCAGAAGCGATTCGTG
GCATCGAACAATTCTCTCACCTATGGTTACTTTTTCTATTTGATCAAAACCTTGAAGCCGGCTGGAGACCAACGGTTCGT
CCACCACGACTAGGGGGGAATGAACGTATTGGTGTATTCGCTTCTCGTGCCACATTTCGTCCAAATGGCATTGGTATGTC
TGCTGTAGAATTAAAAGGGGTTATCCAGGAAGGAAATCAAACCTATTTAGAGTTAGGCAGTGTCGATTTAGTTGATAACA
CGCCGATTATTGATATCAAGCCTTATATCCCCTATTCAGATTCAATTCCCGATGCCCTTGGCGGTTTTGCCGATAAAGAA
CCTGATGTGTTGGATGTGTTTTTATCCATCGATGCACAAAAATCACTGAGTTCTCACCCACAAAGAAGAGAGATAGAGGC
GGTGCTCAAAGAGGTACTAGGACAAGATCCTCGTCCAGCTTATAAAAAAGGAAAAGTCGATAACAAAGAATACGCCGTAA
ATTTGTTTGATTTAAACGTAAAATTCCTTGTTGAAAGCAATTCTATTACAGTTACTGCAATTGATCGCTTTTGA

Upstream 100 bases:

>100_bases
GGCGTAGTTAAAGGTTGGTAATCCCCTTCTTTTAACCAGTTATTCCACAAAAGGTTGACGTGAGAGCGTCAACCTTTTTT
AATGCCTGAAGATATTAATA

Downstream 100 bases:

>100_bases
GATCGCTTTAGGGCTGATATTATATAGGGCTTAATTTTAGATTTGAGCCCATTCTTAAGAGAACAGACTCTATACTAAGG
TTGAACTCTCGGTTTAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKNSLMTYHINPIGFIQSPYKEKFAVPRQPRLAPSATSRIKLVGEANSPEAIRGIEQFSHLWLLFLFDQNLEAGWRPTVR
PPRLGGNERIGVFASRATFRPNGIGMSAVELKGVIQEGNQTYLELGSVDLVDNTPIIDIKPYIPYSDSIPDALGGFADKE
PDVLDVFLSIDAQKSLSSHPQRREIEAVLKEVLGQDPRPAYKKGKVDNKEYAVNLFDLNVKFLVESNSITVTAIDRF

Sequences:

>Translated_237_residues
MKNSLMTYHINPIGFIQSPYKEKFAVPRQPRLAPSATSRIKLVGEANSPEAIRGIEQFSHLWLLFLFDQNLEAGWRPTVR
PPRLGGNERIGVFASRATFRPNGIGMSAVELKGVIQEGNQTYLELGSVDLVDNTPIIDIKPYIPYSDSIPDALGGFADKE
PDVLDVFLSIDAQKSLSSHPQRREIEAVLKEVLGQDPRPAYKKGKVDNKEYAVNLFDLNVKFLVESNSITVTAIDRF
>Mature_237_residues
MKNSLMTYHINPIGFIQSPYKEKFAVPRQPRLAPSATSRIKLVGEANSPEAIRGIEQFSHLWLLFLFDQNLEAGWRPTVR
PPRLGGNERIGVFASRATFRPNGIGMSAVELKGVIQEGNQTYLELGSVDLVDNTPIIDIKPYIPYSDSIPDALGGFADKE
PDVLDVFLSIDAQKSLSSHPQRREIEAVLKEVLGQDPRPAYKKGKVDNKEYAVNLFDLNVKFLVESNSITVTAIDRF

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=149, Percent_Identity=37.5838926174497, Blast_Score=108, Evalue=3e-24,
Organism=Escherichia coli, GI1786393, Length=233, Percent_Identity=50.6437768240343, Blast_Score=247, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24586408, Length=142, Percent_Identity=44.3661971830986, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI45552503, Length=142, Percent_Identity=44.3661971830986, Blast_Score=107, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26455; Mature: 26455

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSLMTYHINPIGFIQSPYKEKFAVPRQPRLAPSATSRIKLVGEANSPEAIRGIEQFSH
CCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
LWLLFLFDQNLEAGWRPTVRPPRLGGNERIGVFASRATFRPNGIGMSAVELKGVIQEGNQ
EEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHHCCCE
TYLELGSVDLVDNTPIIDIKPYIPYSDSIPDALGGFADKEPDVLDVFLSIDAQKSLSSHP
EEEEECCEEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHCCC
QRREIEAVLKEVLGQDPRPAYKKGKVDNKEYAVNLFDLNVKFLVESNSITVTAIDRF
HHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCC
>Mature Secondary Structure
MKNSLMTYHINPIGFIQSPYKEKFAVPRQPRLAPSATSRIKLVGEANSPEAIRGIEQFSH
CCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
LWLLFLFDQNLEAGWRPTVRPPRLGGNERIGVFASRATFRPNGIGMSAVELKGVIQEGNQ
EEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHHCCCE
TYLELGSVDLVDNTPIIDIKPYIPYSDSIPDALGGFADKEPDVLDVFLSIDAQKSLSSHP
EEEEECCEEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHCCC
QRREIEAVLKEVLGQDPRPAYKKGKVDNKEYAVNLFDLNVKFLVESNSITVTAIDRF
HHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]