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The map label for this gene is yhbV [H]

Identifier: 59711099

GI number: 59711099

Start: 529456

End: 530334

Strand: Reverse

Name: yhbV [H]

Synonym: VF_0492

Alternate gene names: 59711099

Gene position: 530334-529456 (Counterclockwise)

Preceding gene: 59711100

Following gene: 59711084

Centisome position: 18.3

GC content: 37.32

Gene sequence:

>879_bases
ATGAAATACGCATTAGGTCCACTCCTATACTTTTGGTCTAAAGAAAACGTTGAGTCCTTTTATCAACAAGCAACCAATAG
TGAAGCTGATATTATTTATTTAGGTGAAAGTGTTTGTTCAAAACGCCGAGAAATGAAACCTAAAGACTGGTTTGCTATTG
CTAAGGATATTTCAGATTCTGGTAAACAAGTCGTGTTATCTACCATGGCTTTATTAGAAGCACCGAGTGAAGTCAATGTA
ATGAAAAAGTACATTGATAATGGTGATTTTATTATCGAAGCCAATGATGTATCTGCAATTCAATTAGCATCAGAGAGCAA
AGTTCCATTTGTTGTTGGCCCAGCGGTTAACTGTTATAACGCTCAAACCCTAAACCTCTTTTTAAAACAAGGGATGACAC
GTTGGTGTATGCCTGTAGAGCTTTCTCGTGAATGGCTACAGAACGTATTAACTCAATGTGACGAACTTGGTATCCGCAAT
AAGTTTGAAACCGAAGTATTCAGTTACGGTTATCTTCCTCTTGCGTATTCTGCTCGTTGCTTTACTGCTCGTGCAGAGAA
TAAACCAAAAGATGAATGTGAAACTTGCTGTATTAAATACCCAACAGGTATTACGGTTAATAGCCAAGAAGGTCAGGAAG
TGTTCACGTTAAATGGTATTCAGACTCAATCTGGCTACTGCTACAACTTGATAAATGACTTACCAAGCATGAGTAACCTA
GTTGATGTAGTACGACTGAGTCCATTAAGTGTTGATACCTTTGATGAAGTAAGAAAATTCAAAGCTAATGAAACAGGCTC
TGAAAAATTTGCTTTAAAAGATGCTCGCCATTGTAATGGCTACTGGCACAATATTGCTGGATTAGACATTCAAATGTAA

Upstream 100 bases:

>100_bases
TGCGGTAGAACCTAAATGGGATGCAACATTAGCGAATGTATCAGAGGGGACACAAACCACTCTTGGTGCTTATCATAAGA
AGTGGCAATAGGAGAACATC

Downstream 100 bases:

>100_bases
TTTTGAATTTTCTTTTGAATACAAAAAAGCCTTATCCATATGAATAAGGCTTTTTTATTATACTAATGTAGCTAATTATT
TTGCTGTTGCTTCTTCTTTT

Product: collagenase-like protease YhbV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKYALGPLLYFWSKENVESFYQQATNSEADIIYLGESVCSKRREMKPKDWFAIAKDISDSGKQVVLSTMALLEAPSEVNV
MKKYIDNGDFIIEANDVSAIQLASESKVPFVVGPAVNCYNAQTLNLFLKQGMTRWCMPVELSREWLQNVLTQCDELGIRN
KFETEVFSYGYLPLAYSARCFTARAENKPKDECETCCIKYPTGITVNSQEGQEVFTLNGIQTQSGYCYNLINDLPSMSNL
VDVVRLSPLSVDTFDEVRKFKANETGSEKFALKDARHCNGYWHNIAGLDIQM

Sequences:

>Translated_292_residues
MKYALGPLLYFWSKENVESFYQQATNSEADIIYLGESVCSKRREMKPKDWFAIAKDISDSGKQVVLSTMALLEAPSEVNV
MKKYIDNGDFIIEANDVSAIQLASESKVPFVVGPAVNCYNAQTLNLFLKQGMTRWCMPVELSREWLQNVLTQCDELGIRN
KFETEVFSYGYLPLAYSARCFTARAENKPKDECETCCIKYPTGITVNSQEGQEVFTLNGIQTQSGYCYNLINDLPSMSNL
VDVVRLSPLSVDTFDEVRKFKANETGSEKFALKDARHCNGYWHNIAGLDIQM
>Mature_292_residues
MKYALGPLLYFWSKENVESFYQQATNSEADIIYLGESVCSKRREMKPKDWFAIAKDISDSGKQVVLSTMALLEAPSEVNV
MKKYIDNGDFIIEANDVSAIQLASESKVPFVVGPAVNCYNAQTLNLFLKQGMTRWCMPVELSREWLQNVLTQCDELGIRN
KFETEVFSYGYLPLAYSARCFTARAENKPKDECETCCIKYPTGITVNSQEGQEVFTLNGIQTQSGYCYNLINDLPSMSNL
VDVVRLSPLSVDTFDEVRKFKANETGSEKFALKDARHCNGYWHNIAGLDIQM

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=291, Percent_Identity=63.2302405498282, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 33022; Mature: 33022

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYALGPLLYFWSKENVESFYQQATNSEADIIYLGESVCSKRREMKPKDWFAIAKDISDS
CCCCHHHHHEECCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHCCC
GKQVVLSTMALLEAPSEVNVMKKYIDNGDFIIEANDVSAIQLASESKVPFVVGPAVNCYN
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCC
AQTLNLFLKQGMTRWCMPVELSREWLQNVLTQCDELGIRNKFETEVFSYGYLPLAYSARC
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCEE
FTARAENKPKDECETCCIKYPTGITVNSQEGQEVFTLNGIQTQSGYCYNLINDLPSMSNL
EEECCCCCCHHHHHHEEEECCCCEEEECCCCCEEEEECCEECCCCCHHHHHHCCCCHHHH
VDVVRLSPLSVDTFDEVRKFKANETGSEKFALKDARHCNGYWHNIAGLDIQM
HHHHHCCCCCCCCHHHHHHHHCCCCCCCCEECCCHHHCCCEEECCCCCEEEC
>Mature Secondary Structure
MKYALGPLLYFWSKENVESFYQQATNSEADIIYLGESVCSKRREMKPKDWFAIAKDISDS
CCCCHHHHHEECCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHCCC
GKQVVLSTMALLEAPSEVNVMKKYIDNGDFIIEANDVSAIQLASESKVPFVVGPAVNCYN
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCC
AQTLNLFLKQGMTRWCMPVELSREWLQNVLTQCDELGIRNKFETEVFSYGYLPLAYSARC
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCEE
FTARAENKPKDECETCCIKYPTGITVNSQEGQEVFTLNGIQTQSGYCYNLINDLPSMSNL
EEECCCCCCHHHHHHEEEECCCCEEEECCCCCEEEEECCEECCCCCHHHHHHCCCCHHHH
VDVVRLSPLSVDTFDEVRKFKANETGSEKFALKDARHCNGYWHNIAGLDIQM
HHHHHCCCCCCCCHHHHHHHHCCCCCCCCEECCCHHHCCCEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]