| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711068
Identifier: 59711068
GI number: 59711068
Start: 492382
End: 493527
Strand: Reverse
Name: 59711068
Synonym: VF_0461
Alternate gene names: NA
Gene position: 493527-492382 (Counterclockwise)
Preceding gene: 59711071
Following gene: 59711062
Centisome position: 17.03
GC content: 39.97
Gene sequence:
>1146_bases ATGAATACCCAATCAATTTCTGCAGCAACAATGAGCAATACCTCGCGCATGCTGCGTTGGGCAAACTTAGCATTTATGCT TTACCTTCTTCTTTTAGCCGTTTCTATGGTTGGTACAGGCTTTAAATGGTCTGTAGGTCAAGAAGCAAAAGTTCTTTTTG AATTTGCTGCTCACCCAATTGCGGGCTTAATGATCGGCTTAGTGGCAACAGCGTTAATTCAATCATCTTCAACAGTTACT TCAATTATTGTTGGATTAGTAGCTGGTGGCTTACCTGTTGAAACAGCTATCCCTATGGTTATGGGTGCAAACATTGGTAC AACCGTTACAAATACACTAGTAAGTCTTGGTCATGCTCGTTGTAAGAACGAATTTAGACGTGCTTTTGCTTGTGCGACAG TTCATGACTTCTTCAACCTACTAGCGGTAACTATTTTCTTACCATTAGAGATGATGTTTGGTATTTTCCAAAAACTATCA GCATGGTTAGTATCTCCGCTACTAAATGCTGGTGATATGAGCATGAAAGGCTTTGATTTTATTAAGCCTATTACAAAGCC GGTAATCAGTGCTATTCAAGAGCCACTATCAAGCTTTGGTAGTATGACTGGTGGTCTACTAATGATTGCTCTTGGTATTA CGATTTTGTTCATCGCTATTACCTTAATGGGTAAGTTAATGAAGAGCCTAATGGTTGGTCGTGCAAAAGAACTACTTAAA AGTGCAATCGGTCGTGGTCCTATACACGGTATTGCATCAGGTACTGCGGTTACGGTTCTTGTTCAATCATCATCAACAAC GACAAGTTTAATGGTTCCGCTAGTTGGTACTGGTGTTCTTAAAGTTCGCGATGTATATCCATTTACTCTAGGTGCTAACA TTGGTACTTGTGTAACAGCTCTACTAGCAGCAACAGCAGTGTCTGGTGAGTATGCAGTATTCGCTCTACAAATTGCACTA GTTCACTTATGCTTTAACGTTATAGCAACGCTAGTAATCTTCGGTACGCCATTCTTACGTGAGTTACCAATTAAAGGTGC TGAGTGGATTGCTGAAATGGCTAACCGTAACAGAAGTGTGGTAGCTGGATATTTAGGTTTTGTATTTATTATCCTACCTG GTAGTGTATTAGCACTAACAGTTTAA
Upstream 100 bases:
>100_bases AGTTTTCTCTTTCACTGTAATATTTCTGAAATATTCGTTATCTACTATCGCTTCAGATTAAATAAACCGACAACATAATT TCTCGGTACGGAGCTTTACT
Downstream 100 bases:
>100_bases AACTAAAAAACACGAATAAAAAAAGCCCCGAAGTTATGCTTCGGGGCTTTTTTATTATATCTAATAAATAATATTAAACA GAAAAAGGATACTTAATTGC
Product: sodium-dependent phosphate transporter
Products: NA
Alternate protein names: Na+/Pi-Cotransporter; Na+/Picotransporter; Sodium-Dependent Phosphate Pump NptA; Na+/Phosphate Symporter; Sodium-Dependent Phosphate Transporter; Sodium Dependent Phosphate Pump
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNTQSISAATMSNTSRMLRWANLAFMLYLLLLAVSMVGTGFKWSVGQEAKVLFEFAAHPIAGLMIGLVATALIQSSSTVT SIIVGLVAGGLPVETAIPMVMGANIGTTVTNTLVSLGHARCKNEFRRAFACATVHDFFNLLAVTIFLPLEMMFGIFQKLS AWLVSPLLNAGDMSMKGFDFIKPITKPVISAIQEPLSSFGSMTGGLLMIALGITILFIAITLMGKLMKSLMVGRAKELLK SAIGRGPIHGIASGTAVTVLVQSSSTTTSLMVPLVGTGVLKVRDVYPFTLGANIGTCVTALLAATAVSGEYAVFALQIAL VHLCFNVIATLVIFGTPFLRELPIKGAEWIAEMANRNRSVVAGYLGFVFIILPGSVLALTV
Sequences:
>Translated_381_residues MNTQSISAATMSNTSRMLRWANLAFMLYLLLLAVSMVGTGFKWSVGQEAKVLFEFAAHPIAGLMIGLVATALIQSSSTVT SIIVGLVAGGLPVETAIPMVMGANIGTTVTNTLVSLGHARCKNEFRRAFACATVHDFFNLLAVTIFLPLEMMFGIFQKLS AWLVSPLLNAGDMSMKGFDFIKPITKPVISAIQEPLSSFGSMTGGLLMIALGITILFIAITLMGKLMKSLMVGRAKELLK SAIGRGPIHGIASGTAVTVLVQSSSTTTSLMVPLVGTGVLKVRDVYPFTLGANIGTCVTALLAATAVSGEYAVFALQIAL VHLCFNVIATLVIFGTPFLRELPIKGAEWIAEMANRNRSVVAGYLGFVFIILPGSVLALTV >Mature_381_residues MNTQSISAATMSNTSRMLRWANLAFMLYLLLLAVSMVGTGFKWSVGQEAKVLFEFAAHPIAGLMIGLVATALIQSSSTVT SIIVGLVAGGLPVETAIPMVMGANIGTTVTNTLVSLGHARCKNEFRRAFACATVHDFFNLLAVTIFLPLEMMFGIFQKLS AWLVSPLLNAGDMSMKGFDFIKPITKPVISAIQEPLSSFGSMTGGLLMIALGITILFIAITLMGKLMKSLMVGRAKELLK SAIGRGPIHGIASGTAVTVLVQSSSTTTSLMVPLVGTGVLKVRDVYPFTLGANIGTCVTALLAATAVSGEYAVFALQIAL VHLCFNVIATLVIFGTPFLRELPIKGAEWIAEMANRNRSVVAGYLGFVFIILPGSVLALTV
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156627569, Length=405, Percent_Identity=33.0864197530864, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI262399385, Length=165, Percent_Identity=44.2424242424242, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI295789160, Length=167, Percent_Identity=41.3173652694611, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI295789158, Length=167, Percent_Identity=41.3173652694611, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI110611906, Length=167, Percent_Identity=41.3173652694611, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI293597525, Length=174, Percent_Identity=36.2068965517241, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI293597523, Length=174, Percent_Identity=36.2068965517241, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI25014088, Length=174, Percent_Identity=36.2068965517241, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI25147712, Length=361, Percent_Identity=27.7008310249307, Blast_Score=149, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40255; Mature: 40255
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQSISAATMSNTSRMLRWANLAFMLYLLLLAVSMVGTGFKWSVGQEAKVLFEFAAHPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVETAIPMVMGANIGTTVTNTLVSLGHAR HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH CKNEFRRAFACATVHDFFNLLAVTIFLPLEMMFGIFQKLSAWLVSPLLNAGDMSMKGFDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IKPITKPVISAIQEPLSSFGSMTGGLLMIALGITILFIAITLMGKLMKSLMVGRAKELLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIGRGPIHGIASGTAVTVLVQSSSTTTSLMVPLVGTGVLKVRDVYPFTLGANIGTCVTA HHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCEEECCCHHHHHHH LLAATAVSGEYAVFALQIALVHLCFNVIATLVIFGTPFLRELPIKGAEWIAEMANRNRSV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCHH VAGYLGFVFIILPGSVLALTV HHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MNTQSISAATMSNTSRMLRWANLAFMLYLLLLAVSMVGTGFKWSVGQEAKVLFEFAAHPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVETAIPMVMGANIGTTVTNTLVSLGHAR HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH CKNEFRRAFACATVHDFFNLLAVTIFLPLEMMFGIFQKLSAWLVSPLLNAGDMSMKGFDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IKPITKPVISAIQEPLSSFGSMTGGLLMIALGITILFIAITLMGKLMKSLMVGRAKELLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIGRGPIHGIASGTAVTVLVQSSSTTTSLMVPLVGTGVLKVRDVYPFTLGANIGTCVTA HHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCEEECCCHHHHHHH LLAATAVSGEYAVFALQIALVHLCFNVIATLVIFGTPFLRELPIKGAEWIAEMANRNRSV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCHH VAGYLGFVFIILPGSVLALTV HHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA