Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
---|---|
Accession | NC_002951 |
Length | 2,809,422 |
Click here to switch to the map view.
The map label for this gene is 57652651
Identifier: 57652651
GI number: 57652651
Start: 467453
End: 467725
Strand: Reverse
Name: 57652651
Synonym: SACOL0464
Alternate gene names: NA
Gene position: 467725-467453 (Counterclockwise)
Preceding gene: 57651306
Following gene: 57652650
Centisome position: 16.65
GC content: 25.27
Gene sequence:
>273_bases ATGACAAAAGAAAGAAGAACATTTAGTTCAGAGTTTAAGTTACAAATGGTTAGATTATATAAAAATGGTAAGCTTAAGAA TGAAATTATACGAAAGTATGATTTAAAACCCTCAATTATCTCAAATTCGATAAAACAACACCAAAATACTGGACCCTTCA ATCATCAAGATAATTTAAAAAGTGATGAAAAAGAGTTAATAAAATTACGCAAAGAAGTTCAACATTTAAAAATGGAACAT GATGTTTTAAAGCAAATTTTAAAGTTGATTTAG
Upstream 100 bases:
>100_bases TCCTTACGTACTTATGATGTGTCAGTGAATCGTCTACACTTAATTGAACAAATTCTATGAGAATAGATATTGTTAAATTA AGAAAGTAGTCAATTTTATT
Downstream 100 bases:
>100_bases AAACTGAACTTTTTAAAGATACATTACTTGAAGATTCTAATTTATCTGATTATATAAAGAACCAACTTCCAACGATATGG AGAGACTAAGAAATAGTTTA
Product: IS3 family transposase
Products: NA
Alternate protein names: ISSdy1 Transposase OrfA; LOW QUALITY PROTEIN Transposase IS3 Family; Transposase IS3/IS; Transposase Family Protein
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEH DVLKQILKLI
Sequences:
>Translated_90_residues MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEH DVLKQILKLI >Mature_89_residues TKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHD VLKQILKLI
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10831; Mature: 10700
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLK CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC SDEKELIKLRKEVQHLKMEHDVLKQILKLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLK CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC SDEKELIKLRKEVQHLKMEHDVLKQILKLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA