| Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
|---|---|
| Accession | NC_002951 |
| Length | 2,809,422 |
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The map label for this gene is licR [H]
Identifier: 57652592
GI number: 57652592
Start: 408681
End: 410636
Strand: Reverse
Name: licR [H]
Synonym: SACOL0403
Alternate gene names: 57652592
Gene position: 410636-408681 (Counterclockwise)
Preceding gene: 57652596
Following gene: 57652591
Centisome position: 14.62
GC content: 34.36
Gene sequence:
>1956_bases TTGTTAAGTTATAGACAAATCGAAATTTTGTATCTTTTAATTCATGAGCAAACGTTTATTCCAATCAATACCATTGCTAA TCAACTTGGTGTATCACCTCGTACCATTCAATATGATATAGCATATATTGAGCAATATGCTGAAACTTATCATTACCAAG TCAGCCGTAATAAAGCTGCAGGCATCAAAGTAACAACAGCTCACGCGACACTATTAAATGAATTAGAGCACAATCTAACA AATCAAATTCATTTTTCAAAAGATGAACGACTCACACATATCGCTTTAAAGTTATTCGAAACAACCGATCCTGTTTCAAC AAAGCAACTTGCGCAAGATGTTAATGTTTCGCGTCGGACAATTGCAGATGATATTAAAATGATTCAAGCCCAACTAGATC AATACCATTTAAAGTTAAATTATGTCCACAATAAAGGATTCAATATTATTGGTGAGGAAGATCATTATCGTAAAGCGTAT GCACACTTTATACATCAATATATGAAACAAGCTGCACCTTTTATAGAGGCGGATATCTTTAATTCAGAATCAATCGCATT GGTTCGCCGTGCCATTATTAAGACATTAAATAGTGAAAATTATCATTTAGTTCAGTCGGCTATCGATGGCTTAATCTATC ATATACTCATTGCCATTCAGCGTTTAAATGAAAATTTTTCGTTCGATATACCTATCAATGAAATTGATAAATGGCGACAT ACTAATCAGTATGCTATTGCTTCAAAAATGATAGAAAACTTAGAACGCAGTTGTAATGTCACATTTCCAGAGTCTGAAAT TATCTTTATCACGTTACATTTACTAGGCTCTAAAATGACTGAACATACAGCATCTTCAATTACCTTTGAATACCATGATT TATCGCAAAATATACATGAATTGATCACTTGTGTTAGCCAAGAATTAGGCATTGATATGTCAAAAGACAACAAGTTACAT ACCAGTCTGATCACACATATCAAACCAGCTATACATCGTATTAAATACGATATGCTACAACCTAATCCTTTGAGGCAAGA AGTTATGCGTCGCTATCCTCAAATCATTGAAGCCGTTAGCAAGCATATTAGTCCAATTGAACAAGATGCTGCTATTCGCT TCAACGAAGATGAATTAACATACATTACAATTCACTTCGCATCAAGTATAGAGCGTGTTGCAACACATAAACAATCAATG ATTAAGGTTGTCTTACTATGTGGTTCTGGTATAGGCACGTCACAACTTTTAAAATCAAAACTAAATCACCTGTATCCTGA GTTTCACATTTGGGATGCCTATTCCATTTATCAATTGGAAGAAAGTCGATTATTGCAAGATAACATTGATTATGTCATTT CAACAGTACCTTGTGAAATATCAGCTGTACCAGTTATTCATGTCGATCCATTTATCAATCAACAATCTCGTCAAAAATTG AATCAAATTATCAATGACTCAAGAGAACAACGAGTCATGAAAATGGCAACTGATGGCAAGTCACTCGCAGATTTATTGCC TGAACATCGCATCATTATAAATAAACAACCATTATCAATTGAATCCGCAATTGCAGTGGCTGTGCAACCTTTAATCAATG ATGGCATTGTCTATTCAAATTATACAGCTGCAATTTTAAAACAATTTGAACAATTCGGGTCATATATGGTCATTAGTCCA CATATTGCACTTATTCACGCTGGTACTGATTATGTACAGAATGGTGTAGGTTTCGCACTAACATATTTCACTGAAGGGAT TATCTTTGGTAGTAAAGCTAACGATCCCGTTCACCTTGTAATTACATTAGCAACGGACCACCCCAATGCACATTTAAAGG CATTGGGACAGTTAAGCGAATGCTTAAGCAACGACTTATATCGACAAGATTTCTTAGATGGGAATATTTTTAAAATTAAA CAACACATTGCTTTAACTATGACAAAGGAGGCTTAA
Upstream 100 bases:
>100_bases AAACATTTTGATATGCAATTTTTCGGATTAAAATATGAAAGAGATTGCATATCTACGTTTTTAAGAAATCGCTTACAATT ACAAATAGGAGGATATTACG
Downstream 100 bases:
>100_bases TAACGTGTCATTAGACATTTTGTCAACAACACGCATCATTGTAAAAGAACAAGTAAATGATTGGACTGAAGCTATAACTA TAGCTTCTCAGCCATTACTA
Product: BglG family transcriptional antiterminator
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLT NQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAY AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLH TSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSM IKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL NQIINDSREQRVMKMATDGKSLADLLPEHRIIINKQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISP HIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIK QHIALTMTKEA
Sequences:
>Translated_651_residues MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLT NQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAY AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLH TSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSM IKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL NQIINDSREQRVMKMATDGKSLADLLPEHRIIINKQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISP HIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIK QHIALTMTKEA >Mature_651_residues MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLT NQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAY AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLH TSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSM IKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL NQIINDSREQRVMKMATDGKSLADLLPEHRIIINKQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISP HIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIK QHIALTMTKEA
Specific function: Positive regulator of the licABCH operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 74474; Mature: 74474
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAA CCCCEEEEEEEEEEECCCEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHEEEEECCCCC GIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRT CEEEEHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH IADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAYAHFIHQYMKQAAPFIEADIF HHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHCCC NSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHC TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHE CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCHHHHHHHHHEEEEHHHHHHHHHH LITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSK HHCCCCCCCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH LNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL HHHCCCCEEEECCEEEEEEHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHH NQIINDSREQRVMKMATDGKSLADLLPEHRIIINKQPLSIESAIAVAVQPLINDGIVYSN HHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECC YTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLV HHHHHHHHHHHHCCEEEEECCEEEEECCHHHHHCCCCEEEEEHHCCEEECCCCCCCEEEE ITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIKQHIALTMTKEA EEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEEEEECCC >Mature Secondary Structure MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAA CCCCEEEEEEEEEEECCCEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHEEEEECCCCC GIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRT CEEEEHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH IADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAYAHFIHQYMKQAAPFIEADIF HHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHCCC NSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHC TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHE CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCHHHHHHHHHEEEEHHHHHHHHHH LITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSK HHCCCCCCCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH LNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKL HHHCCCCEEEECCEEEEEEHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHH NQIINDSREQRVMKMATDGKSLADLLPEHRIIINKQPLSIESAIAVAVQPLINDGIVYSN HHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECC YTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLV HHHHHHHHHHHHCCEEEEECCEEEEECCHHHHHCCCCEEEEEHHCCEEECCCCCCCEEEE ITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIKQHIALTMTKEA EEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377; 10438772 [H]